RNA–Protein interactions for RNA: ENST00000577439.1

LINC00667-201, long intergenic non-protein coding RNA 667, humanhuman

TSL 1 (best)

Gene LINC00667, Length 3,372 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00667-201ENST00000577439 PIAS4Q8N2W9 510 aaPredicted RBP9.69□□□□□ -0.86
LINC00667-201ENST00000577439 GOLGA3Q08378 1498 aa9.68□□□□□ -0.86
LINC00667-201ENST00000577439 KIF21BO75037 1637 aa9.65□□□□□ -0.86
LINC00667-201ENST00000577439 BCL11AQ9H165 835 aa9.64□□□□□ -0.87
LINC00667-201ENST00000577439 SYNJ1O43426 1573 aa9.64□□□□□ -0.87
LINC00667-201ENST00000577439 NBR1Q14596 966 aa9.63□□□□□ -0.87
LINC00667-201ENST00000577439 IFNLR1Q8IU57 520 aaPredicted RBP9.63□□□□□ -0.87
LINC00667-201ENST00000577439 ACIN1Q9UKV3 1341 aaKnown RBP9.63□□□□□ -0.87
LINC00667-201ENST00000577439 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.62□□□□□ -0.87
LINC00667-201ENST00000577439 CEP164Q9UPV0 1460 aa9.61□□□□□ -0.87
LINC00667-201ENST00000577439 DIEXFQ68CQ4 756 aaKnown RBP9.61□□□□□ -0.87
LINC00667-201ENST00000577439 BBXQ8WY36 941 aaPredicted RBP9.6□□□□□ -0.87
LINC00667-201ENST00000577439 NEUROD1Q13562 356 aa9.59□□□□□ -0.87
LINC00667-201ENST00000577439 ATXN8OSP0DMR3 200 aa9.58□□□□□ -0.88
LINC00667-201ENST00000577439 BAZ1BQ9UIG0 1483 aaKnown RBP9.57□□□□□ -0.88
LINC00667-201ENST00000577439 CLIP1P30622 1438 aa9.55□□□□□ -0.88
LINC00667-201ENST00000577439 ATAD2BQ9ULI0 1458 aa9.55□□□□□ -0.88
LINC00667-201ENST00000577439 CENPBP07199 599 aaPredicted RBP9.54□□□□□ -0.88
LINC00667-201ENST00000577439 VPS8Q8N3P4 1428 aa9.54□□□□□ -0.88
LINC00667-201ENST00000577439 VASPP50552 380 aaPredicted RBP9.53□□□□□ -0.88
LINC00667-201ENST00000577439 PABPN1Q86U42 306 aaKnown RBP eCLIP9.52□□□□□ -0.88
LINC00667-201ENST00000577439 TOP2BQ02880 1626 aa9.52□□□□□ -0.89
LINC00667-201ENST00000577439 ZNF316A6NFI3 1004 aaPredicted RBP9.52□□□□□ -0.89
LINC00667-201ENST00000577439 ATF5Q9Y2D1 282 aaPredicted RBP9.52□□□□□ -0.89
LINC00667-201ENST00000577439 RAPGEF2Q9Y4G8 1499 aa9.51□□□□□ -0.89
LINC00667-201ENST00000577439 BIVM-ERCC5R4GMW8 1640 aa9.51□□□□□ -0.89
LINC00667-201ENST00000577439 TRHP20396 242 aaPredicted RBP9.49□□□□□ -0.89
LINC00667-201ENST00000577439 MAPK8IP2Q13387 824 aaPredicted RBP9.47□□□□□ -0.89
LINC00667-201ENST00000577439 SPRYD3Q8NCJ5 442 aa9.47□□□□□ -0.89
LINC00667-201ENST00000577439 HMGXB3Q12766 1538 aa9.47□□□□□ -0.89
LINC00667-201ENST00000577439 ERICH3Q5RHP9 1530 aa9.47□□□□□ -0.89
LINC00667-201ENST00000577439 MYCNP04198 464 aaPredicted RBP9.46□□□□□ -0.9
LINC00667-201ENST00000577439 FBXO3Q9UK99 471 aa9.45□□□□□ -0.9
LINC00667-201ENST00000577439 HNRNPUL2Q1KMD3 747 aaKnown RBP9.44□□□□□ -0.9
LINC00667-201ENST00000577439 DNAJC5Q9H3Z4 198 aa9.43□□□□□ -0.9
LINC00667-201ENST00000577439 PRXQ9BXM0 1461 aa9.42□□□□□ -0.9
LINC00667-201ENST00000577439 CUX2O14529 1486 aa9.42□□□□□ -0.9
LINC00667-201ENST00000577439 ARAP1Q96P48 1450 aa9.42□□□□□ -0.9
LINC00667-201ENST00000577439 THOC2Q8NI27 1593 aaKnown RBP9.39□□□□□ -0.91
LINC00667-201ENST00000577439 MIER1Q8N108 512 aa9.38□□□□□ -0.91
LINC00667-201ENST00000577439 RGL2O15211 777 aa9.38□□□□□ -0.91
LINC00667-201ENST00000577439 CUX1P39880 1505 aa9.38□□□□□ -0.91
LINC00667-201ENST00000577439 CLSPNQ9HAW4 1339 aa9.37□□□□□ -0.91
LINC00667-201ENST00000577439 NCAPD3P42695 1498 aa9.36□□□□□ -0.91
LINC00667-201ENST00000577439 DHX57Q6P158 1386 aaKnown RBP9.36□□□□□ -0.91
LINC00667-201ENST00000577439 YTHDC1Q96MU7 727 aaKnown RBP9.36□□□□□ -0.91
LINC00667-201ENST00000577439 ECM2O94769 699 aaPredicted RBP9.35□□□□□ -0.91
LINC00667-201ENST00000577439 RRBP1Q9P2E9 1410 aaKnown RBP9.35□□□□□ -0.91
LINC00667-201ENST00000577439 PRDM2Q13029 1718 aa9.35□□□□□ -0.91
LINC00667-201ENST00000577439 BRPF1P55201 1214 aaPredicted RBP9.34□□□□□ -0.91
LINC00667-201ENST00000577439 RNF216Q9NWF9 866 aaPredicted RBP9.34□□□□□ -0.91
LINC00667-201ENST00000577439 KIF27Q86VH2 1401 aa9.32□□□□□ -0.92
LINC00667-201ENST00000577439 CFTRP13569 1480 aa9.3□□□□□ -0.92
LINC00667-201ENST00000577439 ARHGAP35Q9NRY4 1499 aa9.3□□□□□ -0.92
LINC00667-201ENST00000577439 KANK4Q5T7N3 995 aaPredicted RBP9.3□□□□□ -0.92
LINC00667-201ENST00000577439 ARID3AQ99856 593 aa9.3□□□□□ -0.92
LINC00667-201ENST00000577439 LAMC3Q9Y6N6 1575 aa9.27□□□□□ -0.93
LINC00667-201ENST00000577439 CCNB3Q8WWL7 1395 aa9.26□□□□□ -0.93
LINC00667-201ENST00000577439 SPDYE4A6NLX3 237 aa9.26□□□□□ -0.93
LINC00667-201ENST00000577439 TIAM1Q13009 1591 aa9.26□□□□□ -0.93
LINC00667-201ENST00000577439 MAP3K1Q13233 1512 aa9.25□□□□□ -0.93
LINC00667-201ENST00000577439 CHGAP10645 457 aaKnown RBP9.25□□□□□ -0.93
LINC00667-201ENST00000577439 ANP32EQ9BTT0 268 aa9.24□□□□□ -0.93
LINC00667-201ENST00000577439 EIF5BO60841 1220 aaKnown RBP9.23□□□□□ -0.93
LINC00667-201ENST00000577439 MAPKBP1O60336 1514 aa9.23□□□□□ -0.93
LINC00667-201ENST00000577439 CFAP43Q8NDM7 1665 aa9.23□□□□□ -0.93
LINC00667-201ENST00000577439 KIF21AQ7Z4S6 1674 aa9.22□□□□□ -0.93
LINC00667-201ENST00000577439 PROM2Q8N271 834 aa9.21□□□□□ -0.93
LINC00667-201ENST00000577439 C1orf115Q9H7X2 142 aa9.21□□□□□ -0.94
LINC00667-201ENST00000577439 IGF1RP08069 1367 aa9.19□□□□□ -0.94
LINC00667-201ENST00000577439 RAB3GAP2Q9H2M9 1393 aa9.19□□□□□ -0.94
LINC00667-201ENST00000577439 LRRC9Q6ZRR7 1453 aa9.19□□□□□ -0.94
LINC00667-201ENST00000577439 PCF11O94913 1555 aaKnown RBP9.18□□□□□ -0.94
LINC00667-201ENST00000577439 FGD5Q6ZNL6 1462 aa9.18□□□□□ -0.94
LINC00667-201ENST00000577439 NECTIN2Q92692 538 aa9.17□□□□□ -0.94
LINC00667-201ENST00000577439 WDR62O43379 1518 aa9.16□□□□□ -0.94
LINC00667-201ENST00000577439 SETD5Q9C0A6 1442 aa9.15□□□□□ -0.94
LINC00667-201ENST00000577439 CARMIL1Q5VZK9 1371 aa9.15□□□□□ -0.94
LINC00667-201ENST00000577439 IGSF3O75054 1194 aa9.15□□□□□ -0.94
LINC00667-201ENST00000577439 SUPT16HQ9Y5B9 1047 aaKnown RBP9.15□□□□□ -0.94
LINC00667-201ENST00000577439 PHLDB1Q86UU1 1377 aa9.15□□□□□ -0.95
LINC00667-201ENST00000577439 FHAD1B1AJZ9 1412 aa9.14□□□□□ -0.95
LINC00667-201ENST00000577439 CADPSQ9ULU8 1353 aa9.14□□□□□ -0.95
LINC00667-201ENST00000577439 NEUROD2Q15784 382 aa9.14□□□□□ -0.95
LINC00667-201ENST00000577439 WDR97A6NE52 1622 aa9.13□□□□□ -0.95
LINC00667-201ENST00000577439 ITGAEP38570 1179 aa9.13□□□□□ -0.95
LINC00667-201ENST00000577439 EFCAB5A4FU69 1503 aa9.12□□□□□ -0.95
LINC00667-201ENST00000577439 CTTNBP2Q8WZ74 1663 aa9.12□□□□□ -0.95
LINC00667-201ENST00000577439 FYCO1Q9BQS8 1478 aa9.12□□□□□ -0.95
LINC00667-201ENST00000577439 CUL7Q14999 1698 aa9.1□□□□□ -0.95
LINC00667-201ENST00000577439 DNMBPQ6XZF7 1577 aa9.1□□□□□ -0.95
LINC00667-201ENST00000577439 ARID3CA6NKF2 412 aa9.1□□□□□ -0.95
LINC00667-201ENST00000577439 AQRO60306 1485 aaKnown RBP eCLIP9.09□□□□□ -0.95
LINC00667-201ENST00000577439 LMOD2Q6P5Q4 547 aa9.09□□□□□ -0.95
LINC00667-201ENST00000577439 CCDC9Q9Y3X0 531 aaKnown RBP9.09□□□□□ -0.95
LINC00667-201ENST00000577439 ABCA10Q8WWZ4 1543 aa9.08□□□□□ -0.96
LINC00667-201ENST00000577439 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.08□□□□□ -0.96
LINC00667-201ENST00000577439 ZMYND15Q9H091 742 aa9.08□□□□□ -0.96
LINC00667-201ENST00000577439 CASKIN1Q8WXD9 1431 aa9.08□□□□□ -0.96
LINC00667-201ENST00000577439 FANCD2Q9BXW9 1451 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms