RNA–Protein interactions for RNA: ENST00000577197.1

TSEN54-204, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 2

Gene TSEN54, Length 650 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-204ENST00000577197 CEP162Q5TB80 1403 aa19.95■□□□□ 0.78
TSEN54-204ENST00000577197 CTTNBP2Q8WZ74 1663 aa19.94■□□□□ 0.78
TSEN54-204ENST00000577197 CEP170Q5SW79 1584 aa19.92■□□□□ 0.78
TSEN54-204ENST00000577197 KIAA0586Q9BVV6 1533 aa19.88■□□□□ 0.77
TSEN54-204ENST00000577197 CLASP1Q7Z460 1538 aa19.87■□□□□ 0.77
TSEN54-204ENST00000577197 CLIP1P30622 1438 aa19.87■□□□□ 0.77
TSEN54-204ENST00000577197 EFCAB5A4FU69 1503 aa19.84■□□□□ 0.77
TSEN54-204ENST00000577197 IQGAP2Q13576 1575 aa19.8■□□□□ 0.76
TSEN54-204ENST00000577197 EHMT2Q96KQ7 1210 aa19.79■□□□□ 0.76
TSEN54-204ENST00000577197 JPH4Q96JJ6 628 aa19.76■□□□□ 0.75
TSEN54-204ENST00000577197 SHROOM2Q13796 1616 aa19.76■□□□□ 0.75
TSEN54-204ENST00000577197 SAMD9Q5K651 1589 aa19.74■□□□□ 0.75
TSEN54-204ENST00000577197 ARHGAP35Q9NRY4 1499 aa19.74■□□□□ 0.75
TSEN54-204ENST00000577197 UGGT2Q9NYU1 1516 aa19.74■□□□□ 0.75
TSEN54-204ENST00000577197 VPS8Q8N3P4 1428 aa19.72■□□□□ 0.75
TSEN54-204ENST00000577197 ARAP1Q96P48 1450 aa19.69■□□□□ 0.74
TSEN54-204ENST00000577197 PRG4Q92954 1404 aaPredicted RBP19.68■□□□□ 0.74
TSEN54-204ENST00000577197 CARMIL2Q6F5E8 1435 aa19.67■□□□□ 0.74
TSEN54-204ENST00000577197 DNAJC5Q9H3Z4 198 aa19.65■□□□□ 0.74
TSEN54-204ENST00000577197 ARHGEF11O15085 1522 aa19.63■□□□□ 0.73
TSEN54-204ENST00000577197 DISP1Q96F81 1524 aa19.62■□□□□ 0.73
TSEN54-204ENST00000577197 FMN1Q68DA7 1419 aa19.61■□□□□ 0.73
TSEN54-204ENST00000577197 KIAA0556O60303 1618 aa19.61■□□□□ 0.73
TSEN54-204ENST00000577197 ERCC6L2Q5T890 1561 aa19.59■□□□□ 0.73
TSEN54-204ENST00000577197 RANGAP1P46060 587 aaPredicted RBP19.57■□□□□ 0.72
TSEN54-204ENST00000577197 RIMBP3CA6NJZ7 1639 aa19.57■□□□□ 0.72
TSEN54-204ENST00000577197 RIMBP3BA6NNM3 1639 aa19.57■□□□□ 0.72
TSEN54-204ENST00000577197 RIMBP3Q9UFD9 1639 aa19.57■□□□□ 0.72
TSEN54-204ENST00000577197 MAP3K1Q13233 1512 aa19.56■□□□□ 0.72
TSEN54-204ENST00000577197 FYCO1Q9BQS8 1478 aa19.54■□□□□ 0.72
TSEN54-204ENST00000577197 CASKIN1Q8WXD9 1431 aa19.52■□□□□ 0.72
TSEN54-204ENST00000577197 FHOD3Q2V2M9 1422 aa19.51■□□□□ 0.71
TSEN54-204ENST00000577197 PTPRGP23470 1445 aa19.51■□□□□ 0.71
TSEN54-204ENST00000577197 P3H3Q8IVL6 736 aa19.5■□□□□ 0.71
TSEN54-204ENST00000577197 PCF11O94913 1555 aaKnown RBP19.45■□□□□ 0.7
TSEN54-204ENST00000577197 APLP2Q06481 763 aa19.42■□□□□ 0.7
TSEN54-204ENST00000577197 HECW1Q76N89 1606 aa19.42■□□□□ 0.7
TSEN54-204ENST00000577197 CFAP43Q8NDM7 1665 aa19.41■□□□□ 0.7
TSEN54-204ENST00000577197 CYB5RLQ6IPT4 315 aa19.41■□□□□ 0.7
TSEN54-204ENST00000577197 TTBK1Q5TCY1 1321 aaPredicted RBP19.41■□□□□ 0.7
TSEN54-204ENST00000577197 UACAQ9BZF9 1416 aa19.4■□□□□ 0.7
TSEN54-204ENST00000577197 CCDC18Q5T9S5 1454 aa19.4■□□□□ 0.7
TSEN54-204ENST00000577197 TIAM1Q13009 1591 aa19.4■□□□□ 0.7
TSEN54-204ENST00000577197 UHRF1BP1LA0JNW5 1464 aa19.38■□□□□ 0.69
TSEN54-204ENST00000577197 ABCA8O94911 1581 aa19.37■□□□□ 0.69
TSEN54-204ENST00000577197 RAPGEF6Q8TEU7 1601 aa19.36■□□□□ 0.69
TSEN54-204ENST00000577197 PLB1Q6P1J6 1458 aa19.35■□□□□ 0.69
TSEN54-204ENST00000577197 ABCC2Q92887 1545 aa19.35■□□□□ 0.69
TSEN54-204ENST00000577197 ADCY10Q96PN6 1610 aa19.3■□□□□ 0.68
TSEN54-204ENST00000577197 LRRC9Q6ZRR7 1453 aa19.29■□□□□ 0.68
TSEN54-204ENST00000577197 EPRSP07814 1512 aaKnown RBP19.29■□□□□ 0.68
TSEN54-204ENST00000577197 NUP153P49790 1475 aaKnown RBP19.28■□□□□ 0.68
TSEN54-204ENST00000577197 LRRIQ1Q96JM4 1722 aa19.27■□□□□ 0.68
TSEN54-204ENST00000577197 KDM5BQ9UGL1 1544 aa19.26■□□□□ 0.67
TSEN54-204ENST00000577197 NPM1P06748 294 aaKnown RBP eCLIP19.26■□□□□ 0.67
TSEN54-204ENST00000577197 TRIM26Q12899 539 aaPredicted RBP19.25■□□□□ 0.67
TSEN54-204ENST00000577197 EHBP1L1Q8N3D4 1523 aa19.25■□□□□ 0.67
TSEN54-204ENST00000577197 ATP1B4Q9UN42 357 aaPredicted RBP19.22■□□□□ 0.67
TSEN54-204ENST00000577197 ATP10BO94823 1461 aa19.22■□□□□ 0.67
TSEN54-204ENST00000577197 ZCCHC11Q5TAX3 1644 aaKnown RBP19.19■□□□□ 0.66
TSEN54-204ENST00000577197 CDK11AQ9UQ88 783 aaPredicted RBP19.17■□□□□ 0.66
TSEN54-204ENST00000577197 MAPKBP1O60336 1514 aa19.16■□□□□ 0.66
TSEN54-204ENST00000577197 KANK4Q5T7N3 995 aaPredicted RBP19.16■□□□□ 0.66
TSEN54-204ENST00000577197 MTUS2Q5JR59 1369 aa19.16■□□□□ 0.66
TSEN54-204ENST00000577197 SUPT6HQ7KZ85 1726 aaKnown RBP19.15■□□□□ 0.66
TSEN54-204ENST00000577197 ARID3CA6NKF2 412 aa19.15■□□□□ 0.66
TSEN54-204ENST00000577197 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.15■□□□□ 0.66
TSEN54-204ENST00000577197 HNRNPUL2Q1KMD3 747 aaKnown RBP19.15■□□□□ 0.66
TSEN54-204ENST00000577197 CDK13Q14004 1512 aaKnown RBP19.15■□□□□ 0.66
TSEN54-204ENST00000577197 RRBP1Q9P2E9 1410 aaKnown RBP19.12■□□□□ 0.65
TSEN54-204ENST00000577197 TROQ12816 1431 aaPredicted RBP19.11■□□□□ 0.65
TSEN54-204ENST00000577197 ASXL2Q76L83 1435 aa19.11■□□□□ 0.65
TSEN54-204ENST00000577197 MAGI3Q5TCQ9 1506 aa19.1■□□□□ 0.65
TSEN54-204ENST00000577197 PLEKHD1A6NEE1 506 aa19.1■□□□□ 0.65
TSEN54-204ENST00000577197 WDR7Q9Y4E6 1490 aa19.09■□□□□ 0.65
TSEN54-204ENST00000577197 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.08■□□□□ 0.65
TSEN54-204ENST00000577197 NCOA2Q15596 1464 aa19.07■□□□□ 0.64
TSEN54-204ENST00000577197 PPARGC1BQ86YN6 1023 aaKnown RBP19.04■□□□□ 0.64
TSEN54-204ENST00000577197 MYOM3Q5VTT5 1437 aa19.02■□□□□ 0.64
TSEN54-204ENST00000577197 KIF14Q15058 1648 aa19.02■□□□□ 0.64
TSEN54-204ENST00000577197 MIA2Q96PC5 1412 aa19.01■□□□□ 0.63
TSEN54-204ENST00000577197 PHLDB1Q86UU1 1377 aa19.01■□□□□ 0.63
TSEN54-204ENST00000577197 CCNB3Q8WWL7 1395 aa19.01■□□□□ 0.63
TSEN54-204ENST00000577197 ABCC10Q5T3U5 1492 aa19.01■□□□□ 0.63
TSEN54-204ENST00000577197 FGD6Q6ZV73 1430 aa18.99■□□□□ 0.63
TSEN54-204ENST00000577197 ITSN2Q9NZM3 1697 aa18.98■□□□□ 0.63
TSEN54-204ENST00000577197 PCGF6Q9BYE7 350 aa18.98■□□□□ 0.63
TSEN54-204ENST00000577197 GLI2P10070 1586 aa18.98■□□□□ 0.63
TSEN54-204ENST00000577197 DIP2BQ9P265 1576 aa18.98■□□□□ 0.63
TSEN54-204ENST00000577197 KCNH8Q96L42 1107 aa18.97■□□□□ 0.63
TSEN54-204ENST00000577197 TCOF1Q13428 1488 aaKnown RBP18.95■□□□□ 0.62
TSEN54-204ENST00000577197 FAM69CQ0P6D2 419 aa18.94■□□□□ 0.62
TSEN54-204ENST00000577197 ABCA9Q8IUA7 1624 aa18.92■□□□□ 0.62
TSEN54-204ENST00000577197 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.91■□□□□ 0.62
TSEN54-204ENST00000577197 ARAP3Q8WWN8 1544 aa18.9■□□□□ 0.62
TSEN54-204ENST00000577197 PTPN23Q9H3S7 1636 aa18.89■□□□□ 0.62
TSEN54-204ENST00000577197 KIF13AQ9H1H9 1805 aa18.89■□□□□ 0.61
TSEN54-204ENST00000577197 GPATCH8Q9UKJ3 1502 aaKnown RBP18.89■□□□□ 0.61
TSEN54-204ENST00000577197 TRHP20396 242 aaPredicted RBP18.88■□□□□ 0.61
TSEN54-204ENST00000577197 MAP3K4Q9Y6R4 1608 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms