RNA–Protein interactions for RNA: ENST00000577101.5

NDE1-212, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 4

Gene NDE1, Length 575 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-212ENST00000577101 ERCC6L2Q5T890 1561 aa16.49■□□□□ 0.23
NDE1-212ENST00000577101 EEA1Q15075 1411 aa16.47■□□□□ 0.23
NDE1-212ENST00000577101 FAM9AQ8IZU1 332 aaPredicted RBP16.45■□□□□ 0.22
NDE1-212ENST00000577101 CSRNP3Q8WYN3 585 aa16.45■□□□□ 0.22
NDE1-212ENST00000577101 CTTNBP2Q8WZ74 1663 aa16.44■□□□□ 0.22
NDE1-212ENST00000577101 KIAA0586Q9BVV6 1533 aa16.43■□□□□ 0.22
NDE1-212ENST00000577101 KIF21BO75037 1637 aa16.42■□□□□ 0.22
NDE1-212ENST00000577101 ARAP1Q96P48 1450 aa16.41■□□□□ 0.22
NDE1-212ENST00000577101 IQGAP2Q13576 1575 aa16.38■□□□□ 0.21
NDE1-212ENST00000577101 JPH4Q96JJ6 628 aa16.35■□□□□ 0.21
NDE1-212ENST00000577101 PRG4Q92954 1404 aaPredicted RBP16.33■□□□□ 0.2
NDE1-212ENST00000577101 UGGT2Q9NYU1 1516 aa16.32■□□□□ 0.2
NDE1-212ENST00000577101 DISP1Q96F81 1524 aa16.31■□□□□ 0.2
NDE1-212ENST00000577101 KIAA0556O60303 1618 aa16.27■□□□□ 0.2
NDE1-212ENST00000577101 GOLGA3Q08378 1498 aa16.25■□□□□ 0.19
NDE1-212ENST00000577101 CYB5RLQ6IPT4 315 aa16.24■□□□□ 0.19
NDE1-212ENST00000577101 EHMT2Q96KQ7 1210 aa16.24■□□□□ 0.19
NDE1-212ENST00000577101 SAMD9Q5K651 1589 aa16.23■□□□□ 0.19
NDE1-212ENST00000577101 ADCY10Q96PN6 1610 aa16.17■□□□□ 0.18
NDE1-212ENST00000577101 TNIKQ9UKE5 1360 aa16.15■□□□□ 0.18
NDE1-212ENST00000577101 CARMIL2Q6F5E8 1435 aa16.15■□□□□ 0.18
NDE1-212ENST00000577101 PTPRGP23470 1445 aa16.11■□□□□ 0.17
NDE1-212ENST00000577101 UBTFP17480 764 aaKnown RBP16.11■□□□□ 0.17
NDE1-212ENST00000577101 ARHGAP35Q9NRY4 1499 aa16.1■□□□□ 0.17
NDE1-212ENST00000577101 ABCA8O94911 1581 aa16.09■□□□□ 0.17
NDE1-212ENST00000577101 P3H3Q8IVL6 736 aa16.09■□□□□ 0.17
NDE1-212ENST00000577101 EFCAB5A4FU69 1503 aa16.09■□□□□ 0.17
NDE1-212ENST00000577101 RANGAP1P46060 587 aaPredicted RBP16.08■□□□□ 0.16
NDE1-212ENST00000577101 FHOD3Q2V2M9 1422 aa16.08■□□□□ 0.16
NDE1-212ENST00000577101 PLB1Q6P1J6 1458 aa16.08■□□□□ 0.16
NDE1-212ENST00000577101 LOC105371045A0A1W2PR82 267 aa16.07■□□□□ 0.16
NDE1-212ENST00000577101 TTBK1Q5TCY1 1321 aaPredicted RBP16.07■□□□□ 0.16
NDE1-212ENST00000577101 ABCC2Q92887 1545 aa16.05■□□□□ 0.16
NDE1-212ENST00000577101 UHRF1BP1LA0JNW5 1464 aa16.05■□□□□ 0.16
NDE1-212ENST00000577101 UACAQ9BZF9 1416 aa16.04■□□□□ 0.16
NDE1-212ENST00000577101 ZCCHC11Q5TAX3 1644 aaKnown RBP16.02■□□□□ 0.16
NDE1-212ENST00000577101 RAPGEF6Q8TEU7 1601 aa16.01■□□□□ 0.15
NDE1-212ENST00000577101 LRRIQ1Q96JM4 1722 aa15.99■□□□□ 0.15
NDE1-212ENST00000577101 KDM5BQ9UGL1 1544 aa15.99■□□□□ 0.15
NDE1-212ENST00000577101 KIF13AQ9H1H9 1805 aa15.98■□□□□ 0.15
NDE1-212ENST00000577101 MAPKBP1O60336 1514 aa15.98■□□□□ 0.15
NDE1-212ENST00000577101 NUP153P49790 1475 aaKnown RBP15.96■□□□□ 0.14
NDE1-212ENST00000577101 CLIP1P30622 1438 aa15.95■□□□□ 0.14
NDE1-212ENST00000577101 CEP162Q5TB80 1403 aa15.95■□□□□ 0.14
NDE1-212ENST00000577101 ATP10BO94823 1461 aa15.92■□□□□ 0.14
NDE1-212ENST00000577101 PCF11O94913 1555 aaKnown RBP15.92■□□□□ 0.14
NDE1-212ENST00000577101 DIP2BQ9P265 1576 aa15.92■□□□□ 0.14
NDE1-212ENST00000577101 ASXL2Q76L83 1435 aa15.89■□□□□ 0.13
NDE1-212ENST00000577101 FMN1Q68DA7 1419 aa15.87■□□□□ 0.13
NDE1-212ENST00000577101 ABCC10Q5T3U5 1492 aa15.87■□□□□ 0.13
NDE1-212ENST00000577101 CDK13Q14004 1512 aaKnown RBP15.87■□□□□ 0.13
NDE1-212ENST00000577101 HECW1Q76N89 1606 aa15.86■□□□□ 0.13
NDE1-212ENST00000577101 ARID3CA6NKF2 412 aa15.86■□□□□ 0.13
NDE1-212ENST00000577101 NPM1P06748 294 aaKnown RBP eCLIP15.84■□□□□ 0.13
NDE1-212ENST00000577101 EPRSP07814 1512 aaKnown RBP15.84■□□□□ 0.13
NDE1-212ENST00000577101 PPRC1Q5VV67 1664 aaKnown RBP15.83■□□□□ 0.13
NDE1-212ENST00000577101 CASKIN1Q8WXD9 1431 aa15.83■□□□□ 0.12
NDE1-212ENST00000577101 WDR7Q9Y4E6 1490 aa15.83■□□□□ 0.12
NDE1-212ENST00000577101 GLI2P10070 1586 aa15.82■□□□□ 0.12
NDE1-212ENST00000577101 MAP3K4Q9Y6R4 1608 aa15.8■□□□□ 0.12
NDE1-212ENST00000577101 TRHP20396 242 aaPredicted RBP15.8■□□□□ 0.12
NDE1-212ENST00000577101 MAGI3Q5TCQ9 1506 aa15.79■□□□□ 0.12
NDE1-212ENST00000577101 FYCO1Q9BQS8 1478 aa15.79■□□□□ 0.12
NDE1-212ENST00000577101 TSPOAP1O95153 1857 aa15.79■□□□□ 0.12
NDE1-212ENST00000577101 AEBP2Q6ZN18 517 aaPredicted RBP15.77■□□□□ 0.12
NDE1-212ENST00000577101 FAM69CQ0P6D2 419 aa15.75■□□□□ 0.11
NDE1-212ENST00000577101 ABCA9Q8IUA7 1624 aa15.75■□□□□ 0.11
NDE1-212ENST00000577101 CFAP43Q8NDM7 1665 aa15.74■□□□□ 0.11
NDE1-212ENST00000577101 KIF14Q15058 1648 aa15.74■□□□□ 0.11
NDE1-212ENST00000577101 VPS8Q8N3P4 1428 aa15.74■□□□□ 0.11
NDE1-212ENST00000577101 CCDC18Q5T9S5 1454 aa15.71■□□□□ 0.11
NDE1-212ENST00000577101 TTC37Q6PGP7 1564 aa15.71■□□□□ 0.11
NDE1-212ENST00000577101 ATP1B4Q9UN42 357 aaPredicted RBP15.71■□□□□ 0.11
NDE1-212ENST00000577101 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.71■□□□□ 0.11
NDE1-212ENST00000577101 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.69■□□□□ 0.1
NDE1-212ENST00000577101 HNRNPUL2Q1KMD3 747 aaKnown RBP15.69■□□□□ 0.1
NDE1-212ENST00000577101 KCNH8Q96L42 1107 aa15.69■□□□□ 0.1
NDE1-212ENST00000577101 TROQ12816 1431 aaPredicted RBP15.67■□□□□ 0.1
NDE1-212ENST00000577101 TIAM1Q13009 1591 aa15.66■□□□□ 0.1
NDE1-212ENST00000577101 PLEKHD1A6NEE1 506 aa15.65■□□□□ 0.1
NDE1-212ENST00000577101 CD109Q6YHK3 1445 aa15.63■□□□□ 0.09
NDE1-212ENST00000577101 CDC42BPBQ9Y5S2 1711 aa15.63■□□□□ 0.09
NDE1-212ENST00000577101 CDC42BPAQ5VT25 1732 aa15.62■□□□□ 0.09
NDE1-212ENST00000577101 MYO5CQ9NQX4 1742 aa15.62■□□□□ 0.09
NDE1-212ENST00000577101 COL17A1Q9UMD9 1497 aaPredicted RBP15.61■□□□□ 0.09
NDE1-212ENST00000577101 MAP3K1Q13233 1512 aa15.6■□□□□ 0.09
NDE1-212ENST00000577101 EHBP1L1Q8N3D4 1523 aa15.59■□□□□ 0.09
NDE1-212ENST00000577101 PREX2Q70Z35 1606 aa15.57■□□□□ 0.08
NDE1-212ENST00000577101 KANK4Q5T7N3 995 aaPredicted RBP15.57■□□□□ 0.08
NDE1-212ENST00000577101 KDM6BO15054 1643 aa15.57■□□□□ 0.08
NDE1-212ENST00000577101 CDK11AQ9UQ88 783 aaPredicted RBP15.56■□□□□ 0.08
NDE1-212ENST00000577101 LRRC9Q6ZRR7 1453 aa15.56■□□□□ 0.08
NDE1-212ENST00000577101 TEX14Q8IWB6 1497 aa15.55■□□□□ 0.08
NDE1-212ENST00000577101 PLCH2O75038 1416 aa15.55■□□□□ 0.08
NDE1-212ENST00000577101 SUPT6HQ7KZ85 1726 aaKnown RBP15.54■□□□□ 0.08
NDE1-212ENST00000577101 FRMPD1Q5SYB0 1578 aa15.53■□□□□ 0.08
NDE1-212ENST00000577101 ARAP3Q8WWN8 1544 aa15.53■□□□□ 0.08
NDE1-212ENST00000577101 MTUS2Q5JR59 1369 aa15.52■□□□□ 0.08
NDE1-212ENST00000577101 GPATCH8Q9UKJ3 1502 aaKnown RBP15.52■□□□□ 0.07
NDE1-212ENST00000577101 FANCAO15360 1455 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 112.6 ms