RNA–Protein interactions for RNA: ENST00000577028.5

EDC4-213, Transcript of enhancer of mRNA decapping 4, humanhuman

TSL 4

Gene EDC4, Length 747 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC4-213ENST00000577028 PRG4Q92954 1404 aaPredicted RBP29.71■■■□□ 2.35
EDC4-213ENST00000577028 JPH4Q96JJ6 628 aa29.66■■■□□ 2.34
EDC4-213ENST00000577028 KIAA0586Q9BVV6 1533 aa29.66■■■□□ 2.34
EDC4-213ENST00000577028 TRHP20396 242 aaPredicted RBP29.61■■■□□ 2.33
EDC4-213ENST00000577028 RAPGEF2Q9Y4G8 1499 aa29.57■■■□□ 2.32
EDC4-213ENST00000577028 IQGAP2Q13576 1575 aa29.56■■■□□ 2.32
EDC4-213ENST00000577028 CTTNBP2Q8WZ74 1663 aa29.51■■■□□ 2.31
EDC4-213ENST00000577028 TTBK1Q5TCY1 1321 aaPredicted RBP29.4■■■□□ 2.3
EDC4-213ENST00000577028 CARMIL2Q6F5E8 1435 aa29.39■■■□□ 2.3
EDC4-213ENST00000577028 ADCY10Q96PN6 1610 aa29.38■■■□□ 2.29
EDC4-213ENST00000577028 PRXQ9BXM0 1461 aa29.35■■■□□ 2.29
EDC4-213ENST00000577028 UGGT2Q9NYU1 1516 aa29.3■■■□□ 2.28
EDC4-213ENST00000577028 DISP1Q96F81 1524 aa29.3■■■□□ 2.28
EDC4-213ENST00000577028 KIAA0556O60303 1618 aa29.29■■■□□ 2.28
EDC4-213ENST00000577028 PTPRGP23470 1445 aa29.28■■■□□ 2.28
EDC4-213ENST00000577028 TNIKQ9UKE5 1360 aa29.28■■■□□ 2.28
EDC4-213ENST00000577028 KIF13AQ9H1H9 1805 aa29.27■■■□□ 2.28
EDC4-213ENST00000577028 EEA1Q15075 1411 aa29.25■■■□□ 2.27
EDC4-213ENST00000577028 NPM1P06748 294 aaKnown RBP eCLIP29.24■■■□□ 2.27
EDC4-213ENST00000577028 FAM9AQ8IZU1 332 aaPredicted RBP29.23■■■□□ 2.27
EDC4-213ENST00000577028 CSRNP3Q8WYN3 585 aa29.23■■■□□ 2.27
EDC4-213ENST00000577028 MAPKBP1O60336 1514 aa29.18■■■□□ 2.26
EDC4-213ENST00000577028 CHIC1Q5VXU3 224 aa29.16■■■□□ 2.26
EDC4-213ENST00000577028 GOLGA3Q08378 1498 aa29.15■■■□□ 2.26
EDC4-213ENST00000577028 ABCC2Q92887 1545 aa29.1■■■□□ 2.25
EDC4-213ENST00000577028 DIP2BQ9P265 1576 aa29.09■■■□□ 2.25
EDC4-213ENST00000577028 UACAQ9BZF9 1416 aa29.09■■■□□ 2.25
EDC4-213ENST00000577028 KIF21BO75037 1637 aa29.08■■■□□ 2.25
EDC4-213ENST00000577028 UHRF1BP1LA0JNW5 1464 aa29.05■■■□□ 2.24
EDC4-213ENST00000577028 ABCC10Q5T3U5 1492 aa29.04■■■□□ 2.24
EDC4-213ENST00000577028 TSPOAP1O95153 1857 aa29.03■■■□□ 2.24
EDC4-213ENST00000577028 ZCCHC11Q5TAX3 1644 aaKnown RBP29.02■■■□□ 2.24
EDC4-213ENST00000577028 FAM69CQ0P6D2 419 aa29.01■■■□□ 2.23
EDC4-213ENST00000577028 SAMD9Q5K651 1589 aa28.98■■■□□ 2.23
EDC4-213ENST00000577028 PLB1Q6P1J6 1458 aa28.97■■■□□ 2.23
EDC4-213ENST00000577028 RANGAP1P46060 587 aaPredicted RBP28.97■■■□□ 2.23
EDC4-213ENST00000577028 EHMT2Q96KQ7 1210 aa28.96■■■□□ 2.23
EDC4-213ENST00000577028 P3H3Q8IVL6 736 aa28.95■■■□□ 2.22
EDC4-213ENST00000577028 ASXL2Q76L83 1435 aa28.94■■■□□ 2.22
EDC4-213ENST00000577028 ABCA8O94911 1581 aa28.93■■■□□ 2.22
EDC4-213ENST00000577028 KDM5BQ9UGL1 1544 aa28.93■■■□□ 2.22
EDC4-213ENST00000577028 RAPGEF6Q8TEU7 1601 aa28.8■■■□□ 2.2
EDC4-213ENST00000577028 UBTFP17480 764 aaKnown RBP28.8■■■□□ 2.2
EDC4-213ENST00000577028 GLI2P10070 1586 aa28.79■■■□□ 2.2
EDC4-213ENST00000577028 FHOD3Q2V2M9 1422 aa28.79■■■□□ 2.2
EDC4-213ENST00000577028 EFCAB5A4FU69 1503 aa28.79■■■□□ 2.2
EDC4-213ENST00000577028 ARID3CA6NKF2 412 aa28.77■■■□□ 2.2
EDC4-213ENST00000577028 EPRSP07814 1512 aaKnown RBP28.77■■■□□ 2.2
EDC4-213ENST00000577028 WDR7Q9Y4E6 1490 aa28.77■■■□□ 2.2
EDC4-213ENST00000577028 PPRC1Q5VV67 1664 aaKnown RBP28.76■■■□□ 2.19
EDC4-213ENST00000577028 KDM6BO15054 1643 aa28.76■■■□□ 2.19
EDC4-213ENST00000577028 MAP3K4Q9Y6R4 1608 aa28.74■■■□□ 2.19
EDC4-213ENST00000577028 CFAP43Q8NDM7 1665 aa28.64■■■□□ 2.18
EDC4-213ENST00000577028 KCNH8Q96L42 1107 aa28.63■■■□□ 2.17
EDC4-213ENST00000577028 ATP10BO94823 1461 aa28.63■■■□□ 2.17
EDC4-213ENST00000577028 NUP153P49790 1475 aaKnown RBP28.6■■■□□ 2.17
EDC4-213ENST00000577028 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.6■■■□□ 2.17
EDC4-213ENST00000577028 HNRNPUL2Q1KMD3 747 aaKnown RBP28.6■■■□□ 2.17
EDC4-213ENST00000577028 TEX14Q8IWB6 1497 aa28.58■■■□□ 2.17
EDC4-213ENST00000577028 ARHGAP35Q9NRY4 1499 aa28.56■■■□□ 2.16
EDC4-213ENST00000577028 CD109Q6YHK3 1445 aa28.51■■■□□ 2.15
EDC4-213ENST00000577028 HECW1Q76N89 1606 aa28.49■■■□□ 2.15
EDC4-213ENST00000577028 ABCA9Q8IUA7 1624 aa28.47■■■□□ 2.15
EDC4-213ENST00000577028 FMN1Q68DA7 1419 aa28.47■■■□□ 2.15
EDC4-213ENST00000577028 CDK13Q14004 1512 aaKnown RBP28.46■■■□□ 2.15
EDC4-213ENST00000577028 ATP1B4Q9UN42 357 aaPredicted RBP28.45■■■□□ 2.14
EDC4-213ENST00000577028 MAGI3Q5TCQ9 1506 aa28.43■■■□□ 2.14
EDC4-213ENST00000577028 LRRIQ1Q96JM4 1722 aa28.38■■■□□ 2.13
EDC4-213ENST00000577028 COL17A1Q9UMD9 1497 aaPredicted RBP28.37■■■□□ 2.13
EDC4-213ENST00000577028 PCF11O94913 1555 aaKnown RBP28.36■■■□□ 2.13
EDC4-213ENST00000577028 PLEKHD1A6NEE1 506 aa28.35■■■□□ 2.13
EDC4-213ENST00000577028 AEBP2Q6ZN18 517 aaPredicted RBP28.34■■■□□ 2.13
EDC4-213ENST00000577028 CLIP1P30622 1438 aa28.32■■■□□ 2.12
EDC4-213ENST00000577028 TTC37Q6PGP7 1564 aa28.31■■■□□ 2.12
EDC4-213ENST00000577028 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.28■■■□□ 2.12
EDC4-213ENST00000577028 CFAP74Q9C0B2 1584 aa28.23■■■□□ 2.11
EDC4-213ENST00000577028 KIF14Q15058 1648 aa28.21■■■□□ 2.11
EDC4-213ENST00000577028 MYO5CQ9NQX4 1742 aa28.21■■■□□ 2.11
EDC4-213ENST00000577028 CASKIN1Q8WXD9 1431 aa28.2■■■□□ 2.11
EDC4-213ENST00000577028 ARAP3Q8WWN8 1544 aa28.2■■■□□ 2.1
EDC4-213ENST00000577028 NEO1Q92859 1461 aa28.2■■■□□ 2.1
EDC4-213ENST00000577028 CDK11AQ9UQ88 783 aaPredicted RBP28.18■■■□□ 2.1
EDC4-213ENST00000577028 CCDC18Q5T9S5 1454 aa28.18■■■□□ 2.1
EDC4-213ENST00000577028 FYCO1Q9BQS8 1478 aa28.18■■■□□ 2.1
EDC4-213ENST00000577028 FANCAO15360 1455 aa28.14■■■□□ 2.09
EDC4-213ENST00000577028 PHLDB1Q86UU1 1377 aa28.13■■■□□ 2.09
EDC4-213ENST00000577028 CEP162Q5TB80 1403 aa28.13■■■□□ 2.09
EDC4-213ENST00000577028 TROQ12816 1431 aaPredicted RBP28.12■■■□□ 2.09
EDC4-213ENST00000577028 FRMPD1Q5SYB0 1578 aa28.11■■■□□ 2.09
EDC4-213ENST00000577028 RICTORQ6R327 1708 aa28.09■■■□□ 2.09
EDC4-213ENST00000577028 ADGRL1O94910 1474 aa28.08■■■□□ 2.09
EDC4-213ENST00000577028 AKNAQ7Z591 1439 aa28.07■■■□□ 2.08
EDC4-213ENST00000577028 RAPGEF3O95398 923 aa28.06■■■□□ 2.08
EDC4-213ENST00000577028 KDM4FA0A1W2PPD8 638 aa28.04■■■□□ 2.08
EDC4-213ENST00000577028 DENND4BO75064 1496 aaPredicted RBP28.02■■■□□ 2.08
EDC4-213ENST00000577028 PLCH2O75038 1416 aa28.02■■■□□ 2.08
EDC4-213ENST00000577028 ARHGAP5Q13017 1502 aa28.02■■■□□ 2.08
EDC4-213ENST00000577028 LOC105371045A0A1W2PR82 267 aa28.01■■■□□ 2.07
EDC4-213ENST00000577028 CDC42BPBQ9Y5S2 1711 aa28■■■□□ 2.07
EDC4-213ENST00000577028 PREX2Q70Z35 1606 aa27.99■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms