RNA–Protein interactions for RNA: ENST00000576553.1

POLR2A-206, Transcript of RNA polymerase II subunit A, humanhuman

TSL 2

Gene POLR2A, Length 602 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2A-206ENST00000576553 ERCC6L2Q5T890 1561 aa35.32■■■■□ 3.24
POLR2A-206ENST00000576553 KIAA0586Q9BVV6 1533 aa35.3■■■■□ 3.24
POLR2A-206ENST00000576553 PRG4Q92954 1404 aaPredicted RBP35.29■■■■□ 3.24
POLR2A-206ENST00000576553 RAPGEF2Q9Y4G8 1499 aa35.19■■■■□ 3.22
POLR2A-206ENST00000576553 TRHP20396 242 aaPredicted RBP35.05■■■■□ 3.2
POLR2A-206ENST00000576553 IQGAP2Q13576 1575 aa35.04■■■■□ 3.2
POLR2A-206ENST00000576553 PRXQ9BXM0 1461 aa34.97■■■■□ 3.19
POLR2A-206ENST00000576553 CARMIL2Q6F5E8 1435 aa34.97■■■■□ 3.19
POLR2A-206ENST00000576553 EEA1Q15075 1411 aa34.93■■■■□ 3.18
POLR2A-206ENST00000576553 CSRNP3Q8WYN3 585 aa34.9■■■■□ 3.18
POLR2A-206ENST00000576553 UGGT2Q9NYU1 1516 aa34.85■■■■□ 3.17
POLR2A-206ENST00000576553 TNIKQ9UKE5 1360 aa34.85■■■■□ 3.17
POLR2A-206ENST00000576553 PTPRGP23470 1445 aa34.84■■■■□ 3.17
POLR2A-206ENST00000576553 CTTNBP2Q8WZ74 1663 aa34.83■■■■□ 3.17
POLR2A-206ENST00000576553 CHIC1Q5VXU3 224 aa34.83■■■■□ 3.17
POLR2A-206ENST00000576553 DISP1Q96F81 1524 aa34.8■■■■□ 3.16
POLR2A-206ENST00000576553 NPM1P06748 294 aaKnown RBP eCLIP34.79■■■■□ 3.16
POLR2A-206ENST00000576553 TTBK1Q5TCY1 1321 aaPredicted RBP34.75■■■■□ 3.15
POLR2A-206ENST00000576553 ADCY10Q96PN6 1610 aa34.74■■■■□ 3.15
POLR2A-206ENST00000576553 KIAA0556O60303 1618 aa34.7■■■■□ 3.15
POLR2A-206ENST00000576553 FAM9AQ8IZU1 332 aaPredicted RBP34.69■■■■□ 3.14
POLR2A-206ENST00000576553 GOLGA3Q08378 1498 aa34.68■■■■□ 3.14
POLR2A-206ENST00000576553 MAPKBP1O60336 1514 aa34.62■■■■□ 3.13
POLR2A-206ENST00000576553 UACAQ9BZF9 1416 aa34.6■■■■□ 3.13
POLR2A-206ENST00000576553 UHRF1BP1LA0JNW5 1464 aa34.58■■■■□ 3.13
POLR2A-206ENST00000576553 ABCC2Q92887 1545 aa34.56■■■■□ 3.12
POLR2A-206ENST00000576553 KIF21BO75037 1637 aa34.53■■■■□ 3.12
POLR2A-206ENST00000576553 ABCC10Q5T3U5 1492 aa34.5■■■■□ 3.11
POLR2A-206ENST00000576553 KIF13AQ9H1H9 1805 aa34.47■■■■□ 3.11
POLR2A-206ENST00000576553 FAM69CQ0P6D2 419 aa34.45■■■■□ 3.11
POLR2A-206ENST00000576553 DIP2BQ9P265 1576 aa34.4■■■■□ 3.1
POLR2A-206ENST00000576553 KDM5BQ9UGL1 1544 aa34.4■■■■□ 3.1
POLR2A-206ENST00000576553 PLB1Q6P1J6 1458 aa34.38■■■■□ 3.09
POLR2A-206ENST00000576553 SAMD9Q5K651 1589 aa34.37■■■■□ 3.09
POLR2A-206ENST00000576553 P3H3Q8IVL6 736 aa34.36■■■■□ 3.09
POLR2A-206ENST00000576553 ASXL2Q76L83 1435 aa34.36■■■■□ 3.09
POLR2A-206ENST00000576553 ABCA8O94911 1581 aa34.34■■■■□ 3.09
POLR2A-206ENST00000576553 ZCCHC11Q5TAX3 1644 aaKnown RBP34.3■■■■□ 3.08
POLR2A-206ENST00000576553 UBTFP17480 764 aaKnown RBP34.29■■■■□ 3.08
POLR2A-206ENST00000576553 RANGAP1P46060 587 aaPredicted RBP34.29■■■■□ 3.08
POLR2A-206ENST00000576553 EHMT2Q96KQ7 1210 aa34.25■■■■□ 3.07
POLR2A-206ENST00000576553 EFCAB5A4FU69 1503 aa34.21■■■■□ 3.07
POLR2A-206ENST00000576553 GLI2P10070 1586 aa34.19■■■■□ 3.06
POLR2A-206ENST00000576553 FHOD3Q2V2M9 1422 aa34.16■■■■□ 3.06
POLR2A-206ENST00000576553 EPRSP07814 1512 aaKnown RBP34.15■■■■□ 3.06
POLR2A-206ENST00000576553 WDR7Q9Y4E6 1490 aa34.15■■■■□ 3.06
POLR2A-206ENST00000576553 RAPGEF6Q8TEU7 1601 aa34.12■■■■□ 3.05
POLR2A-206ENST00000576553 TSPOAP1O95153 1857 aa34.1■■■■□ 3.05
POLR2A-206ENST00000576553 ATP10BO94823 1461 aa34.06■■■■□ 3.04
POLR2A-206ENST00000576553 ARID3CA6NKF2 412 aa34.04■■■■□ 3.04
POLR2A-206ENST00000576553 MAP3K4Q9Y6R4 1608 aa34■■■■□ 3.03
POLR2A-206ENST00000576553 KCNH8Q96L42 1107 aa33.99■■■■□ 3.03
POLR2A-206ENST00000576553 NUP153P49790 1475 aaKnown RBP33.98■■■■□ 3.03
POLR2A-206ENST00000576553 ARHGAP35Q9NRY4 1499 aa33.96■■■■□ 3.03
POLR2A-206ENST00000576553 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP33.96■■■■□ 3.03
POLR2A-206ENST00000576553 HNRNPUL2Q1KMD3 747 aaKnown RBP33.96■■■■□ 3.03
POLR2A-206ENST00000576553 KDM6BO15054 1643 aa33.95■■■■□ 3.03
POLR2A-206ENST00000576553 PPRC1Q5VV67 1664 aaKnown RBP33.95■■■■□ 3.03
POLR2A-206ENST00000576553 TEX14Q8IWB6 1497 aa33.94■■■■□ 3.02
POLR2A-206ENST00000576553 FMN1Q68DA7 1419 aa33.92■■■■□ 3.02
POLR2A-206ENST00000576553 CFAP43Q8NDM7 1665 aa33.89■■■■□ 3.02
POLR2A-206ENST00000576553 CD109Q6YHK3 1445 aa33.87■■■■□ 3.01
POLR2A-206ENST00000576553 MAGI3Q5TCQ9 1506 aa33.82■■■■□ 3
POLR2A-206ENST00000576553 PLEKHD1A6NEE1 506 aa33.8■■■■□ 3
POLR2A-206ENST00000576553 HECW1Q76N89 1606 aa33.77■■■■□ 3
POLR2A-206ENST00000576553 ATP1B4Q9UN42 357 aaPredicted RBP33.76■■■□□ 2.99
POLR2A-206ENST00000576553 ABCA9Q8IUA7 1624 aa33.75■■■□□ 2.99
POLR2A-206ENST00000576553 CLIP1P30622 1438 aa33.7■■■□□ 2.99
POLR2A-206ENST00000576553 CDK13Q14004 1512 aaKnown RBP33.7■■■□□ 2.99
POLR2A-206ENST00000576553 COL17A1Q9UMD9 1497 aaPredicted RBP33.67■■■□□ 2.98
POLR2A-206ENST00000576553 CDK11AQ9UQ88 783 aaPredicted RBP33.64■■■□□ 2.98
POLR2A-206ENST00000576553 PHLDB1Q86UU1 1377 aa33.6■■■□□ 2.97
POLR2A-206ENST00000576553 CASKIN1Q8WXD9 1431 aa33.6■■■□□ 2.97
POLR2A-206ENST00000576553 PCF11O94913 1555 aaKnown RBP33.55■■■□□ 2.96
POLR2A-206ENST00000576553 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP33.54■■■□□ 2.96
POLR2A-206ENST00000576553 NEO1Q92859 1461 aa33.54■■■□□ 2.96
POLR2A-206ENST00000576553 ARAP3Q8WWN8 1544 aa33.53■■■□□ 2.96
POLR2A-206ENST00000576553 CCDC18Q5T9S5 1454 aa33.52■■■□□ 2.96
POLR2A-206ENST00000576553 AEBP2Q6ZN18 517 aaPredicted RBP33.52■■■□□ 2.96
POLR2A-206ENST00000576553 FYCO1Q9BQS8 1478 aa33.5■■■□□ 2.95
POLR2A-206ENST00000576553 TTC37Q6PGP7 1564 aa33.47■■■□□ 2.95
POLR2A-206ENST00000576553 TROQ12816 1431 aaPredicted RBP33.47■■■□□ 2.95
POLR2A-206ENST00000576553 CEP162Q5TB80 1403 aa33.47■■■□□ 2.95
POLR2A-206ENST00000576553 LRRIQ1Q96JM4 1722 aa33.47■■■□□ 2.95
POLR2A-206ENST00000576553 CFAP74Q9C0B2 1584 aa33.42■■■□□ 2.94
POLR2A-206ENST00000576553 KIF14Q15058 1648 aa33.42■■■□□ 2.94
POLR2A-206ENST00000576553 FANCAO15360 1455 aa33.41■■■□□ 2.94
POLR2A-206ENST00000576553 LOC105371045A0A1W2PR82 267 aa33.38■■■□□ 2.93
POLR2A-206ENST00000576553 PLCH2O75038 1416 aa33.37■■■□□ 2.93
POLR2A-206ENST00000576553 AKNAQ7Z591 1439 aa33.36■■■□□ 2.93
POLR2A-206ENST00000576553 RAPGEF3O95398 923 aa33.33■■■□□ 2.93
POLR2A-206ENST00000576553 MYO5CQ9NQX4 1742 aa33.31■■■□□ 2.92
POLR2A-206ENST00000576553 DENND4BO75064 1496 aaPredicted RBP33.31■■■□□ 2.92
POLR2A-206ENST00000576553 EFCAB2Q5VUJ9 269 aa33.28■■■□□ 2.92
POLR2A-206ENST00000576553 KDM4FA0A1W2PPD8 638 aa33.27■■■□□ 2.92
POLR2A-206ENST00000576553 FRMPD1Q5SYB0 1578 aa33.24■■■□□ 2.91
POLR2A-206ENST00000576553 ADGRL1O94910 1474 aa33.23■■■□□ 2.91
POLR2A-206ENST00000576553 ARHGAP5Q13017 1502 aa33.21■■■□□ 2.91
POLR2A-206ENST00000576553 RICTORQ6R327 1708 aa33.19■■■□□ 2.9
POLR2A-206ENST00000576553 SCAPERQ9BY12 1400 aa33.19■■■□□ 2.9
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms