RNA–Protein interactions for RNA: ENST00000576353.5

SNF8-217, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 700 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-217ENST00000576353 KIAA0586Q9BVV6 1533 aa39.58■■■■□ 3.93
SNF8-217ENST00000576353 PRG4Q92954 1404 aaPredicted RBP39.53■■■■□ 3.92
SNF8-217ENST00000576353 RAPGEF2Q9Y4G8 1499 aa39.53■■■■□ 3.92
SNF8-217ENST00000576353 ERCC6L2Q5T890 1561 aa39.5■■■■□ 3.91
SNF8-217ENST00000576353 CHIC1Q5VXU3 224 aa39.43■■■■□ 3.9
SNF8-217ENST00000576353 CSRNP3Q8WYN3 585 aa39.36■■■■□ 3.89
SNF8-217ENST00000576353 PRXQ9BXM0 1461 aa39.35■■■■□ 3.89
SNF8-217ENST00000576353 EEA1Q15075 1411 aa39.34■■■■□ 3.89
SNF8-217ENST00000576353 IQGAP2Q13576 1575 aa39.27■■■■□ 3.88
SNF8-217ENST00000576353 CARMIL2Q6F5E8 1435 aa39.2■■■■□ 3.87
SNF8-217ENST00000576353 FAM9AQ8IZU1 332 aaPredicted RBP39.16■■■■□ 3.86
SNF8-217ENST00000576353 TRHP20396 242 aaPredicted RBP39.1■■■■□ 3.85
SNF8-217ENST00000576353 UGGT2Q9NYU1 1516 aa39.08■■■■□ 3.85
SNF8-217ENST00000576353 TNIKQ9UKE5 1360 aa39.08■■■■□ 3.85
SNF8-217ENST00000576353 PTPRGP23470 1445 aa39.07■■■■□ 3.85
SNF8-217ENST00000576353 DISP1Q96F81 1524 aa39.02■■■■□ 3.84
SNF8-217ENST00000576353 CTTNBP2Q8WZ74 1663 aa39.01■■■■□ 3.84
SNF8-217ENST00000576353 TTBK1Q5TCY1 1321 aaPredicted RBP38.99■■■■□ 3.83
SNF8-217ENST00000576353 NPM1P06748 294 aaKnown RBP eCLIP38.96■■■■□ 3.83
SNF8-217ENST00000576353 GOLGA3Q08378 1498 aa38.92■■■■□ 3.82
SNF8-217ENST00000576353 KIAA0556O60303 1618 aa38.88■■■■□ 3.81
SNF8-217ENST00000576353 ADCY10Q96PN6 1610 aa38.85■■■■□ 3.81
SNF8-217ENST00000576353 KIF21BO75037 1637 aa38.84■■■■□ 3.81
SNF8-217ENST00000576353 UACAQ9BZF9 1416 aa38.79■■■■□ 3.8
SNF8-217ENST00000576353 UHRF1BP1LA0JNW5 1464 aa38.73■■■■□ 3.79
SNF8-217ENST00000576353 ABCC2Q92887 1545 aa38.69■■■■□ 3.78
SNF8-217ENST00000576353 MAPKBP1O60336 1514 aa38.68■■■■□ 3.78
SNF8-217ENST00000576353 UBTFP17480 764 aaKnown RBP38.66■■■■□ 3.78
SNF8-217ENST00000576353 P3H3Q8IVL6 736 aa38.65■■■■□ 3.78
SNF8-217ENST00000576353 EHMT2Q96KQ7 1210 aa38.64■■■■□ 3.78
SNF8-217ENST00000576353 RANGAP1P46060 587 aaPredicted RBP38.61■■■■□ 3.77
SNF8-217ENST00000576353 SAMD9Q5K651 1589 aa38.57■■■■□ 3.76
SNF8-217ENST00000576353 ABCC10Q5T3U5 1492 aa38.56■■■■□ 3.76
SNF8-217ENST00000576353 PLB1Q6P1J6 1458 aa38.56■■■■□ 3.76
SNF8-217ENST00000576353 FAM69CQ0P6D2 419 aa38.55■■■■□ 3.76
SNF8-217ENST00000576353 KDM5BQ9UGL1 1544 aa38.53■■■■□ 3.76
SNF8-217ENST00000576353 ABCA8O94911 1581 aa38.49■■■■□ 3.75
SNF8-217ENST00000576353 ASXL2Q76L83 1435 aa38.47■■■■□ 3.75
SNF8-217ENST00000576353 EFCAB5A4FU69 1503 aa38.43■■■■□ 3.74
SNF8-217ENST00000576353 DIP2BQ9P265 1576 aa38.41■■■■□ 3.74
SNF8-217ENST00000576353 KIF13AQ9H1H9 1805 aa38.41■■■■□ 3.74
SNF8-217ENST00000576353 FHOD3Q2V2M9 1422 aa38.39■■■■□ 3.74
SNF8-217ENST00000576353 ZCCHC11Q5TAX3 1644 aaKnown RBP38.38■■■■□ 3.73
SNF8-217ENST00000576353 RAPGEF6Q8TEU7 1601 aa38.24■■■■□ 3.71
SNF8-217ENST00000576353 WDR7Q9Y4E6 1490 aa38.24■■■■□ 3.71
SNF8-217ENST00000576353 ARID3CA6NKF2 412 aa38.23■■■■□ 3.71
SNF8-217ENST00000576353 GLI2P10070 1586 aa38.23■■■■□ 3.71
SNF8-217ENST00000576353 EPRSP07814 1512 aaKnown RBP38.22■■■■□ 3.71
SNF8-217ENST00000576353 ATP10BO94823 1461 aa38.22■■■■□ 3.71
SNF8-217ENST00000576353 ARHGAP35Q9NRY4 1499 aa38.21■■■■□ 3.71
SNF8-217ENST00000576353 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP38.14■■■■□ 3.7
SNF8-217ENST00000576353 HNRNPUL2Q1KMD3 747 aaKnown RBP38.14■■■■□ 3.7
SNF8-217ENST00000576353 NUP153P49790 1475 aaKnown RBP38.14■■■■□ 3.7
SNF8-217ENST00000576353 FMN1Q68DA7 1419 aa38.13■■■■□ 3.7
SNF8-217ENST00000576353 KCNH8Q96L42 1107 aa38.13■■■■□ 3.69
SNF8-217ENST00000576353 TSPOAP1O95153 1857 aa38.03■■■■□ 3.68
SNF8-217ENST00000576353 MAP3K4Q9Y6R4 1608 aa37.98■■■■□ 3.67
SNF8-217ENST00000576353 CLIP1P30622 1438 aa37.98■■■■□ 3.67
SNF8-217ENST00000576353 PLEKHD1A6NEE1 506 aa37.98■■■■□ 3.67
SNF8-217ENST00000576353 ATP1B4Q9UN42 357 aaPredicted RBP37.98■■■■□ 3.67
SNF8-217ENST00000576353 CD109Q6YHK3 1445 aa37.95■■■■□ 3.67
SNF8-217ENST00000576353 TEX14Q8IWB6 1497 aa37.93■■■■□ 3.66
SNF8-217ENST00000576353 PPRC1Q5VV67 1664 aaKnown RBP37.89■■■■□ 3.66
SNF8-217ENST00000576353 HECW1Q76N89 1606 aa37.87■■■■□ 3.65
SNF8-217ENST00000576353 KDM6BO15054 1643 aa37.86■■■■□ 3.65
SNF8-217ENST00000576353 CFAP43Q8NDM7 1665 aa37.85■■■■□ 3.65
SNF8-217ENST00000576353 MAGI3Q5TCQ9 1506 aa37.85■■■■□ 3.65
SNF8-217ENST00000576353 CDK13Q14004 1512 aaKnown RBP37.82■■■■□ 3.65
SNF8-217ENST00000576353 LOC105371045A0A1W2PR82 267 aa37.81■■■■□ 3.64
SNF8-217ENST00000576353 CDK11AQ9UQ88 783 aaPredicted RBP37.81■■■■□ 3.64
SNF8-217ENST00000576353 CASKIN1Q8WXD9 1431 aa37.79■■■■□ 3.64
SNF8-217ENST00000576353 ABCA9Q8IUA7 1624 aa37.77■■■■□ 3.64
SNF8-217ENST00000576353 CEP162Q5TB80 1403 aa37.75■■■■□ 3.63
SNF8-217ENST00000576353 PCF11O94913 1555 aaKnown RBP37.68■■■■□ 3.62
SNF8-217ENST00000576353 FYCO1Q9BQS8 1478 aa37.67■■■■□ 3.62
SNF8-217ENST00000576353 COL17A1Q9UMD9 1497 aaPredicted RBP37.66■■■■□ 3.62
SNF8-217ENST00000576353 CCDC18Q5T9S5 1454 aa37.65■■■■□ 3.62
SNF8-217ENST00000576353 PHLDB1Q86UU1 1377 aa37.64■■■■□ 3.62
SNF8-217ENST00000576353 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP37.6■■■■□ 3.61
SNF8-217ENST00000576353 TROQ12816 1431 aaPredicted RBP37.59■■■■□ 3.61
SNF8-217ENST00000576353 NEO1Q92859 1461 aa37.55■■■■□ 3.6
SNF8-217ENST00000576353 LRRIQ1Q96JM4 1722 aa37.54■■■■□ 3.6
SNF8-217ENST00000576353 ARAP3Q8WWN8 1544 aa37.52■■■■□ 3.6
SNF8-217ENST00000576353 TTC37Q6PGP7 1564 aa37.5■■■■□ 3.59
SNF8-217ENST00000576353 KIF14Q15058 1648 aa37.46■■■■□ 3.59
SNF8-217ENST00000576353 PLCH2O75038 1416 aa37.45■■■■□ 3.59
SNF8-217ENST00000576353 FANCAO15360 1455 aa37.45■■■■□ 3.59
SNF8-217ENST00000576353 AKNAQ7Z591 1439 aa37.4■■■■□ 3.58
SNF8-217ENST00000576353 EFCAB2Q5VUJ9 269 aa37.37■■■■□ 3.57
SNF8-217ENST00000576353 CFAP74Q9C0B2 1584 aa37.37■■■■□ 3.57
SNF8-217ENST00000576353 RAPGEF3O95398 923 aa37.36■■■■□ 3.57
SNF8-217ENST00000576353 VPS8Q8N3P4 1428 aa37.32■■■■□ 3.56
SNF8-217ENST00000576353 MTUS2Q5JR59 1369 aa37.3■■■■□ 3.56
SNF8-217ENST00000576353 DENND4BO75064 1496 aaPredicted RBP37.3■■■■□ 3.56
SNF8-217ENST00000576353 MYO5CQ9NQX4 1742 aa37.28■■■■□ 3.56
SNF8-217ENST00000576353 AEBP2Q6ZN18 517 aaPredicted RBP37.26■■■■□ 3.56
SNF8-217ENST00000576353 ADGRL1O94910 1474 aa37.24■■■■□ 3.55
SNF8-217ENST00000576353 ARHGAP5Q13017 1502 aa37.24■■■■□ 3.55
SNF8-217ENST00000576353 SCAPERQ9BY12 1400 aa37.21■■■■□ 3.55
SNF8-217ENST00000576353 FRMPD1Q5SYB0 1578 aa37.17■■■■□ 3.54
Retrieved 100 of 20,778 RNA–protein pairs in 327.5 ms