RNA–Protein interactions for RNA: ENST00000576036.5

LITAF-218, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 4 BASIC

Gene LITAF, Length 603 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-218ENST00000576036 CTTNBP2Q8WZ74 1663 aa26.09■■□□□ 1.77
LITAF-218ENST00000576036 KIAA0586Q9BVV6 1533 aa26.06■■□□□ 1.76
LITAF-218ENST00000576036 RIMBP3CA6NJZ7 1639 aa26.05■■□□□ 1.76
LITAF-218ENST00000576036 RIMBP3BA6NNM3 1639 aa26.05■■□□□ 1.76
LITAF-218ENST00000576036 RIMBP3Q9UFD9 1639 aa26.05■■□□□ 1.76
LITAF-218ENST00000576036 ARHGEF11O15085 1522 aa26.04■■□□□ 1.76
LITAF-218ENST00000576036 ERCC6L2Q5T890 1561 aa26.01■■□□□ 1.75
LITAF-218ENST00000576036 IQGAP2Q13576 1575 aa26■■□□□ 1.75
LITAF-218ENST00000576036 GOLGA3Q08378 1498 aa25.91■■□□□ 1.74
LITAF-218ENST00000576036 JPH4Q96JJ6 628 aa25.9■■□□□ 1.74
LITAF-218ENST00000576036 UGGT2Q9NYU1 1516 aa25.88■■□□□ 1.73
LITAF-218ENST00000576036 ARAP1Q96P48 1450 aa25.88■■□□□ 1.73
LITAF-218ENST00000576036 PRG4Q92954 1404 aaPredicted RBP25.88■■□□□ 1.73
LITAF-218ENST00000576036 DISP1Q96F81 1524 aa25.83■■□□□ 1.72
LITAF-218ENST00000576036 EHMT2Q96KQ7 1210 aa25.8■■□□□ 1.72
LITAF-218ENST00000576036 KIAA0556O60303 1618 aa25.79■■□□□ 1.72
LITAF-218ENST00000576036 SAMD9Q5K651 1589 aa25.75■■□□□ 1.71
LITAF-218ENST00000576036 UBTFP17480 764 aaKnown RBP25.69■■□□□ 1.7
LITAF-218ENST00000576036 CARMIL2Q6F5E8 1435 aa25.69■■□□□ 1.7
LITAF-218ENST00000576036 CYB5RLQ6IPT4 315 aa25.64■■□□□ 1.7
LITAF-218ENST00000576036 TNIKQ9UKE5 1360 aa25.62■■□□□ 1.69
LITAF-218ENST00000576036 EFCAB5A4FU69 1503 aa25.61■■□□□ 1.69
LITAF-218ENST00000576036 LOC105371045A0A1W2PR82 267 aa25.58■■□□□ 1.69
LITAF-218ENST00000576036 ARHGAP35Q9NRY4 1499 aa25.57■■□□□ 1.68
LITAF-218ENST00000576036 ADCY10Q96PN6 1610 aa25.56■■□□□ 1.68
LITAF-218ENST00000576036 PTPRGP23470 1445 aa25.56■■□□□ 1.68
LITAF-218ENST00000576036 RANGAP1P46060 587 aaPredicted RBP25.55■■□□□ 1.68
LITAF-218ENST00000576036 FHOD3Q2V2M9 1422 aa25.53■■□□□ 1.68
LITAF-218ENST00000576036 P3H3Q8IVL6 736 aa25.52■■□□□ 1.68
LITAF-218ENST00000576036 ABCA8O94911 1581 aa25.49■■□□□ 1.67
LITAF-218ENST00000576036 TTBK1Q5TCY1 1321 aaPredicted RBP25.47■■□□□ 1.67
LITAF-218ENST00000576036 PLB1Q6P1J6 1458 aa25.47■■□□□ 1.67
LITAF-218ENST00000576036 ABCC2Q92887 1545 aa25.45■■□□□ 1.66
LITAF-218ENST00000576036 UHRF1BP1LA0JNW5 1464 aa25.45■■□□□ 1.66
LITAF-218ENST00000576036 UACAQ9BZF9 1416 aa25.45■■□□□ 1.66
LITAF-218ENST00000576036 CLIP1P30622 1438 aa25.43■■□□□ 1.66
LITAF-218ENST00000576036 CEP162Q5TB80 1403 aa25.43■■□□□ 1.66
LITAF-218ENST00000576036 RAPGEF6Q8TEU7 1601 aa25.4■■□□□ 1.66
LITAF-218ENST00000576036 ZCCHC11Q5TAX3 1644 aaKnown RBP25.35■■□□□ 1.65
LITAF-218ENST00000576036 KDM5BQ9UGL1 1544 aa25.33■■□□□ 1.65
LITAF-218ENST00000576036 NUP153P49790 1475 aaKnown RBP25.3■■□□□ 1.64
LITAF-218ENST00000576036 LRRIQ1Q96JM4 1722 aa25.3■■□□□ 1.64
LITAF-218ENST00000576036 PCF11O94913 1555 aaKnown RBP25.29■■□□□ 1.64
LITAF-218ENST00000576036 FMN1Q68DA7 1419 aa25.29■■□□□ 1.64
LITAF-218ENST00000576036 MAPKBP1O60336 1514 aa25.28■■□□□ 1.64
LITAF-218ENST00000576036 ATP10BO94823 1461 aa25.23■■□□□ 1.63
LITAF-218ENST00000576036 HECW1Q76N89 1606 aa25.23■■□□□ 1.63
LITAF-218ENST00000576036 KIF13AQ9H1H9 1805 aa25.2■■□□□ 1.62
LITAF-218ENST00000576036 CASKIN1Q8WXD9 1431 aa25.19■■□□□ 1.62
LITAF-218ENST00000576036 CDK13Q14004 1512 aaKnown RBP25.17■■□□□ 1.62
LITAF-218ENST00000576036 ASXL2Q76L83 1435 aa25.16■■□□□ 1.62
LITAF-218ENST00000576036 FYCO1Q9BQS8 1478 aa25.15■■□□□ 1.62
LITAF-218ENST00000576036 ARID3CA6NKF2 412 aa25.15■■□□□ 1.62
LITAF-218ENST00000576036 NPM1P06748 294 aaKnown RBP eCLIP25.15■■□□□ 1.62
LITAF-218ENST00000576036 DIP2BQ9P265 1576 aa25.14■■□□□ 1.62
LITAF-218ENST00000576036 EPRSP07814 1512 aaKnown RBP25.14■■□□□ 1.62
LITAF-218ENST00000576036 VPS8Q8N3P4 1428 aa25.1■■□□□ 1.61
LITAF-218ENST00000576036 ABCC10Q5T3U5 1492 aa25.09■■□□□ 1.61
LITAF-218ENST00000576036 WDR7Q9Y4E6 1490 aa25.09■■□□□ 1.61
LITAF-218ENST00000576036 GLI2P10070 1586 aa25.03■■□□□ 1.6
LITAF-218ENST00000576036 CCDC18Q5T9S5 1454 aa25.02■■□□□ 1.6
LITAF-218ENST00000576036 MAGI3Q5TCQ9 1506 aa25.02■■□□□ 1.6
LITAF-218ENST00000576036 CFAP43Q8NDM7 1665 aa25.01■■□□□ 1.59
LITAF-218ENST00000576036 ATP1B4Q9UN42 357 aaPredicted RBP25.01■■□□□ 1.59
LITAF-218ENST00000576036 MAP3K4Q9Y6R4 1608 aa24.97■■□□□ 1.59
LITAF-218ENST00000576036 PPRC1Q5VV67 1664 aaKnown RBP24.96■■□□□ 1.59
LITAF-218ENST00000576036 TRHP20396 242 aaPredicted RBP24.95■■□□□ 1.58
LITAF-218ENST00000576036 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.94■■□□□ 1.58
LITAF-218ENST00000576036 HNRNPUL2Q1KMD3 747 aaKnown RBP24.94■■□□□ 1.58
LITAF-218ENST00000576036 TSPOAP1O95153 1857 aa24.94■■□□□ 1.58
LITAF-218ENST00000576036 ABCA9Q8IUA7 1624 aa24.94■■□□□ 1.58
LITAF-218ENST00000576036 KIF14Q15058 1648 aa24.93■■□□□ 1.58
LITAF-218ENST00000576036 TIAM1Q13009 1591 aa24.93■■□□□ 1.58
LITAF-218ENST00000576036 FAM69CQ0P6D2 419 aa24.92■■□□□ 1.58
LITAF-218ENST00000576036 TROQ12816 1431 aaPredicted RBP24.9■■□□□ 1.58
LITAF-218ENST00000576036 TTC37Q6PGP7 1564 aa24.89■■□□□ 1.58
LITAF-218ENST00000576036 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.88■■□□□ 1.57
LITAF-218ENST00000576036 PLEKHD1A6NEE1 506 aa24.88■■□□□ 1.57
LITAF-218ENST00000576036 KCNH8Q96L42 1107 aa24.88■■□□□ 1.57
LITAF-218ENST00000576036 MAP3K1Q13233 1512 aa24.86■■□□□ 1.57
LITAF-218ENST00000576036 EHBP1L1Q8N3D4 1523 aa24.81■■□□□ 1.56
LITAF-218ENST00000576036 CDK11AQ9UQ88 783 aaPredicted RBP24.81■■□□□ 1.56
LITAF-218ENST00000576036 MYO5CQ9NQX4 1742 aa24.78■■□□□ 1.56
LITAF-218ENST00000576036 CD109Q6YHK3 1445 aa24.78■■□□□ 1.56
LITAF-218ENST00000576036 LRRC9Q6ZRR7 1453 aa24.77■■□□□ 1.56
LITAF-218ENST00000576036 CDC42BPAQ5VT25 1732 aa24.76■■□□□ 1.55
LITAF-218ENST00000576036 MTUS2Q5JR59 1369 aa24.74■■□□□ 1.55
LITAF-218ENST00000576036 CDC42BPBQ9Y5S2 1711 aa24.74■■□□□ 1.55
LITAF-218ENST00000576036 KANK4Q5T7N3 995 aaPredicted RBP24.72■■□□□ 1.55
LITAF-218ENST00000576036 SUPT6HQ7KZ85 1726 aaKnown RBP24.72■■□□□ 1.55
LITAF-218ENST00000576036 PREX2Q70Z35 1606 aa24.72■■□□□ 1.55
LITAF-218ENST00000576036 ARAP3Q8WWN8 1544 aa24.68■■□□□ 1.54
LITAF-218ENST00000576036 TEX14Q8IWB6 1497 aa24.68■■□□□ 1.54
LITAF-218ENST00000576036 PLCH2O75038 1416 aa24.67■■□□□ 1.54
LITAF-218ENST00000576036 NCOA2Q15596 1464 aa24.65■■□□□ 1.54
LITAF-218ENST00000576036 GPATCH8Q9UKJ3 1502 aaKnown RBP24.63■■□□□ 1.53
LITAF-218ENST00000576036 COL17A1Q9UMD9 1497 aaPredicted RBP24.62■■□□□ 1.53
LITAF-218ENST00000576036 CFAP74Q9C0B2 1584 aa24.62■■□□□ 1.53
LITAF-218ENST00000576036 ITSN2Q9NZM3 1697 aa24.61■■□□□ 1.53
LITAF-218ENST00000576036 FANCAO15360 1455 aa24.6■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms