RNA–Protein interactions for RNA: ENST00000575599.5

RPAIN-216, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-216ENST00000575599 TRIM41Q8WV44 630 aa22.63■■□□□ 1.21
RPAIN-216ENST00000575599 CEP170Q5SW79 1584 aa22.59■■□□□ 1.21
RPAIN-216ENST00000575599 IGF1RP08069 1367 aa22.57■■□□□ 1.2
RPAIN-216ENST00000575599 NUP160Q12769 1436 aa22.56■■□□□ 1.2
RPAIN-216ENST00000575599 CUL7Q14999 1698 aa22.56■■□□□ 1.2
RPAIN-216ENST00000575599 ARAP1Q96P48 1450 aa22.49■■□□□ 1.19
RPAIN-216ENST00000575599 RUSC2Q8N2Y8 1516 aa22.48■■□□□ 1.19
RPAIN-216ENST00000575599 CYB5RLQ6IPT4 315 aa22.47■■□□□ 1.19
RPAIN-216ENST00000575599 CARMIL1Q5VZK9 1371 aa22.46■■□□□ 1.19
RPAIN-216ENST00000575599 SHROOM2Q13796 1616 aa22.41■■□□□ 1.18
RPAIN-216ENST00000575599 ERCC6L2Q5T890 1561 aa22.39■■□□□ 1.18
RPAIN-216ENST00000575599 KIAA0586Q9BVV6 1533 aa22.33■■□□□ 1.16
RPAIN-216ENST00000575599 RAPGEF2Q9Y4G8 1499 aa22.32■■□□□ 1.16
RPAIN-216ENST00000575599 JPH4Q96JJ6 628 aa22.32■■□□□ 1.16
RPAIN-216ENST00000575599 PRG4Q92954 1404 aaPredicted RBP22.32■■□□□ 1.16
RPAIN-216ENST00000575599 IQGAP2Q13576 1575 aa22.23■■□□□ 1.15
RPAIN-216ENST00000575599 PRXQ9BXM0 1461 aa22.22■■□□□ 1.15
RPAIN-216ENST00000575599 EEA1Q15075 1411 aa22.19■■□□□ 1.14
RPAIN-216ENST00000575599 CSRNP3Q8WYN3 585 aa22.18■■□□□ 1.14
RPAIN-216ENST00000575599 FAM9AQ8IZU1 332 aaPredicted RBP22.16■■□□□ 1.14
RPAIN-216ENST00000575599 CTTNBP2Q8WZ74 1663 aa22.16■■□□□ 1.14
RPAIN-216ENST00000575599 CARMIL2Q6F5E8 1435 aa22.11■■□□□ 1.13
RPAIN-216ENST00000575599 UGGT2Q9NYU1 1516 aa22.08■■□□□ 1.13
RPAIN-216ENST00000575599 TTBK1Q5TCY1 1321 aaPredicted RBP22.08■■□□□ 1.12
RPAIN-216ENST00000575599 TRHP20396 242 aaPredicted RBP22.06■■□□□ 1.12
RPAIN-216ENST00000575599 DISP1Q96F81 1524 aa22.06■■□□□ 1.12
RPAIN-216ENST00000575599 TNIKQ9UKE5 1360 aa22.04■■□□□ 1.12
RPAIN-216ENST00000575599 KIAA0556O60303 1618 aa22.03■■□□□ 1.12
RPAIN-216ENST00000575599 PTPRGP23470 1445 aa22.03■■□□□ 1.12
RPAIN-216ENST00000575599 ADCY10Q96PN6 1610 aa22■■□□□ 1.11
RPAIN-216ENST00000575599 KIF21BO75037 1637 aa21.99■■□□□ 1.11
RPAIN-216ENST00000575599 GOLGA3Q08378 1498 aa21.96■■□□□ 1.11
RPAIN-216ENST00000575599 NPM1P06748 294 aaKnown RBP eCLIP21.93■■□□□ 1.1
RPAIN-216ENST00000575599 EHMT2Q96KQ7 1210 aa21.93■■□□□ 1.1
RPAIN-216ENST00000575599 UACAQ9BZF9 1416 aa21.88■■□□□ 1.09
RPAIN-216ENST00000575599 RANGAP1P46060 587 aaPredicted RBP21.87■■□□□ 1.09
RPAIN-216ENST00000575599 MAPKBP1O60336 1514 aa21.85■■□□□ 1.09
RPAIN-216ENST00000575599 ABCC2Q92887 1545 aa21.85■■□□□ 1.09
RPAIN-216ENST00000575599 UHRF1BP1LA0JNW5 1464 aa21.85■■□□□ 1.09
RPAIN-216ENST00000575599 P3H3Q8IVL6 736 aa21.85■■□□□ 1.09
RPAIN-216ENST00000575599 SAMD9Q5K651 1589 aa21.84■■□□□ 1.09
RPAIN-216ENST00000575599 UBTFP17480 764 aaKnown RBP21.82■■□□□ 1.08
RPAIN-216ENST00000575599 PLB1Q6P1J6 1458 aa21.81■■□□□ 1.08
RPAIN-216ENST00000575599 KIF13AQ9H1H9 1805 aa21.79■■□□□ 1.08
RPAIN-216ENST00000575599 ABCA8O94911 1581 aa21.77■■□□□ 1.08
RPAIN-216ENST00000575599 ABCC10Q5T3U5 1492 aa21.76■■□□□ 1.07
RPAIN-216ENST00000575599 ZCCHC11Q5TAX3 1644 aaKnown RBP21.75■■□□□ 1.07
RPAIN-216ENST00000575599 KDM5BQ9UGL1 1544 aa21.75■■□□□ 1.07
RPAIN-216ENST00000575599 DIP2BQ9P265 1576 aa21.75■■□□□ 1.07
RPAIN-216ENST00000575599 FHOD3Q2V2M9 1422 aa21.74■■□□□ 1.07
RPAIN-216ENST00000575599 FAM69CQ0P6D2 419 aa21.74■■□□□ 1.07
RPAIN-216ENST00000575599 EFCAB5A4FU69 1503 aa21.73■■□□□ 1.07
RPAIN-216ENST00000575599 ASXL2Q76L83 1435 aa21.73■■□□□ 1.07
RPAIN-216ENST00000575599 RAPGEF6Q8TEU7 1601 aa21.67■■□□□ 1.06
RPAIN-216ENST00000575599 ARID3CA6NKF2 412 aa21.65■■□□□ 1.06
RPAIN-216ENST00000575599 ARHGAP35Q9NRY4 1499 aa21.62■■□□□ 1.05
RPAIN-216ENST00000575599 WDR7Q9Y4E6 1490 aa21.61■■□□□ 1.05
RPAIN-216ENST00000575599 TSPOAP1O95153 1857 aa21.6■■□□□ 1.05
RPAIN-216ENST00000575599 EPRSP07814 1512 aaKnown RBP21.59■■□□□ 1.05
RPAIN-216ENST00000575599 GLI2P10070 1586 aa21.58■■□□□ 1.05
RPAIN-216ENST00000575599 ATP10BO94823 1461 aa21.58■■□□□ 1.04
RPAIN-216ENST00000575599 NUP153P49790 1475 aaKnown RBP21.57■■□□□ 1.04
RPAIN-216ENST00000575599 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.54■■□□□ 1.04
RPAIN-216ENST00000575599 HNRNPUL2Q1KMD3 747 aaKnown RBP21.54■■□□□ 1.04
RPAIN-216ENST00000575599 FMN1Q68DA7 1419 aa21.52■■□□□ 1.04
RPAIN-216ENST00000575599 KCNH8Q96L42 1107 aa21.51■■□□□ 1.03
RPAIN-216ENST00000575599 MAP3K4Q9Y6R4 1608 aa21.51■■□□□ 1.03
RPAIN-216ENST00000575599 PPRC1Q5VV67 1664 aaKnown RBP21.49■■□□□ 1.03
RPAIN-216ENST00000575599 CLIP1P30622 1438 aa21.47■■□□□ 1.03
RPAIN-216ENST00000575599 ATP1B4Q9UN42 357 aaPredicted RBP21.47■■□□□ 1.03
RPAIN-216ENST00000575599 HECW1Q76N89 1606 aa21.46■■□□□ 1.03
RPAIN-216ENST00000575599 CACNB1Q02641 598 aaPredicted RBP21.45■■□□□ 1.02
RPAIN-216ENST00000575599 CDK13Q14004 1512 aaKnown RBP21.44■■□□□ 1.02
RPAIN-216ENST00000575599 CFAP43Q8NDM7 1665 aa21.44■■□□□ 1.02
RPAIN-216ENST00000575599 KDM6BO15054 1643 aa21.43■■□□□ 1.02
RPAIN-216ENST00000575599 TEX14Q8IWB6 1497 aa21.41■■□□□ 1.02
RPAIN-216ENST00000575599 CD109Q6YHK3 1445 aa21.41■■□□□ 1.02
RPAIN-216ENST00000575599 PCF11O94913 1555 aaKnown RBP21.39■■□□□ 1.02
RPAIN-216ENST00000575599 PLEKHD1A6NEE1 506 aa21.38■■□□□ 1.01
RPAIN-216ENST00000575599 LOC105371045A0A1W2PR82 267 aa21.37■■□□□ 1.01
RPAIN-216ENST00000575599 ABCA9Q8IUA7 1624 aa21.37■■□□□ 1.01
RPAIN-216ENST00000575599 CEP162Q5TB80 1403 aa21.36■■□□□ 1.01
RPAIN-216ENST00000575599 MAGI3Q5TCQ9 1506 aa21.35■■□□□ 1.01
RPAIN-216ENST00000575599 LRRIQ1Q96JM4 1722 aa21.34■■□□□ 1.01
RPAIN-216ENST00000575599 CASKIN1Q8WXD9 1431 aa21.34■■□□□ 1.01
RPAIN-216ENST00000575599 DMRT2Q9Y5R5 561 aa21.32■■□□□ 1
RPAIN-216ENST00000575599 FYCO1Q9BQS8 1478 aa21.31■■□□□ 1
RPAIN-216ENST00000575599 CCDC18Q5T9S5 1454 aa21.28■■□□□ 1
RPAIN-216ENST00000575599 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.27■■□□□ 1
RPAIN-216ENST00000575599 COL17A1Q9UMD9 1497 aaPredicted RBP21.27■■□□□ 1
RPAIN-216ENST00000575599 CDK11AQ9UQ88 783 aaPredicted RBP21.27■■□□□ 1
RPAIN-216ENST00000575599 TTC37Q6PGP7 1564 aa21.27■□□□□ 0.99
RPAIN-216ENST00000575599 TROQ12816 1431 aaPredicted RBP21.23■□□□□ 0.99
RPAIN-216ENST00000575599 KIF14Q15058 1648 aa21.22■□□□□ 0.99
RPAIN-216ENST00000575599 MAPK8IP2Q13387 824 aaPredicted RBP21.2■□□□□ 0.98
RPAIN-216ENST00000575599 NEO1Q92859 1461 aa21.18■□□□□ 0.98
RPAIN-216ENST00000575599 ARAP3Q8WWN8 1544 aa21.16■□□□□ 0.98
RPAIN-216ENST00000575599 FANCAO15360 1455 aa21.16■□□□□ 0.98
RPAIN-216ENST00000575599 CFAP74Q9C0B2 1584 aa21.15■□□□□ 0.98
RPAIN-216ENST00000575599 PHLDB1Q86UU1 1377 aa21.15■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms