RNA–Protein interactions for RNA: ENST00000575483.5

CDC27-217, Transcript of cell division cycle 27, humanhuman

TSL 5

Gene CDC27, Length 781 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-217ENST00000575483 ERCC6L2Q5T890 1561 aa24.97■■□□□ 1.59
CDC27-217ENST00000575483 ERICH3Q5RHP9 1530 aa24.95■■□□□ 1.58
CDC27-217ENST00000575483 TRHP20396 242 aaPredicted RBP24.94■■□□□ 1.58
CDC27-217ENST00000575483 FHAD1B1AJZ9 1412 aa24.93■■□□□ 1.58
CDC27-217ENST00000575483 SHROOM2Q13796 1616 aa24.92■■□□□ 1.58
CDC27-217ENST00000575483 RUSC2Q8N2Y8 1516 aa24.73■■□□□ 1.55
CDC27-217ENST00000575483 MSH5O43196 834 aa24.69■■□□□ 1.54
CDC27-217ENST00000575483 PRG4Q92954 1404 aaPredicted RBP24.66■■□□□ 1.54
CDC27-217ENST00000575483 JPH4Q96JJ6 628 aa24.61■■□□□ 1.53
CDC27-217ENST00000575483 KIF13AQ9H1H9 1805 aa24.59■■□□□ 1.53
CDC27-217ENST00000575483 IGF1RP08069 1367 aa24.59■■□□□ 1.53
CDC27-217ENST00000575483 CUL7Q14999 1698 aa24.59■■□□□ 1.53
CDC27-217ENST00000575483 KIF27Q86VH2 1401 aa24.55■■□□□ 1.52
CDC27-217ENST00000575483 KIAA0586Q9BVV6 1533 aa24.52■■□□□ 1.52
CDC27-217ENST00000575483 ADCY10Q96PN6 1610 aa24.48■■□□□ 1.51
CDC27-217ENST00000575483 MAPKBP1O60336 1514 aa24.45■■□□□ 1.5
CDC27-217ENST00000575483 ABCC10Q5T3U5 1492 aa24.38■■□□□ 1.49
CDC27-217ENST00000575483 CARMIL1Q5VZK9 1371 aa24.38■■□□□ 1.49
CDC27-217ENST00000575483 DIP2BQ9P265 1576 aa24.37■■□□□ 1.49
CDC27-217ENST00000575483 IQGAP2Q13576 1575 aa24.3■■□□□ 1.48
CDC27-217ENST00000575483 FAM69CQ0P6D2 419 aa24.26■■□□□ 1.47
CDC27-217ENST00000575483 PTPRGP23470 1445 aa24.25■■□□□ 1.47
CDC27-217ENST00000575483 NPM1P06748 294 aaKnown RBP eCLIP24.24■■□□□ 1.47
CDC27-217ENST00000575483 DISP1Q96F81 1524 aa24.22■■□□□ 1.47
CDC27-217ENST00000575483 TNIKQ9UKE5 1360 aa24.21■■□□□ 1.47
CDC27-217ENST00000575483 CARMIL2Q6F5E8 1435 aa24.2■■□□□ 1.46
CDC27-217ENST00000575483 ABCC2Q92887 1545 aa24.2■■□□□ 1.46
CDC27-217ENST00000575483 RAPGEF2Q9Y4G8 1499 aa24.18■■□□□ 1.46
CDC27-217ENST00000575483 UGGT2Q9NYU1 1516 aa24.17■■□□□ 1.46
CDC27-217ENST00000575483 UHRF1BP1LA0JNW5 1464 aa24.17■■□□□ 1.46
CDC27-217ENST00000575483 TSPOAP1O95153 1857 aa24.16■■□□□ 1.46
CDC27-217ENST00000575483 KDM6BO15054 1643 aa24.11■■□□□ 1.45
CDC27-217ENST00000575483 KIAA0556O60303 1618 aa24.1■■□□□ 1.45
CDC27-217ENST00000575483 PPRC1Q5VV67 1664 aaKnown RBP24.1■■□□□ 1.45
CDC27-217ENST00000575483 UACAQ9BZF9 1416 aa24.1■■□□□ 1.45
CDC27-217ENST00000575483 GLI2P10070 1586 aa24.09■■□□□ 1.45
CDC27-217ENST00000575483 ASXL2Q76L83 1435 aa24.09■■□□□ 1.45
CDC27-217ENST00000575483 CTTNBP2Q8WZ74 1663 aa24.07■■□□□ 1.44
CDC27-217ENST00000575483 TTBK1Q5TCY1 1321 aaPredicted RBP24.07■■□□□ 1.44
CDC27-217ENST00000575483 KDM5BQ9UGL1 1544 aa24.06■■□□□ 1.44
CDC27-217ENST00000575483 PLB1Q6P1J6 1458 aa24.06■■□□□ 1.44
CDC27-217ENST00000575483 ZCCHC11Q5TAX3 1644 aaKnown RBP24.02■■□□□ 1.44
CDC27-217ENST00000575483 PRXQ9BXM0 1461 aa23.99■■□□□ 1.43
CDC27-217ENST00000575483 MAP3K4Q9Y6R4 1608 aa23.98■■□□□ 1.43
CDC27-217ENST00000575483 EPRSP07814 1512 aaKnown RBP23.97■■□□□ 1.43
CDC27-217ENST00000575483 ABCA8O94911 1581 aa23.91■■□□□ 1.42
CDC27-217ENST00000575483 GOLGA3Q08378 1498 aa23.88■■□□□ 1.41
CDC27-217ENST00000575483 COL17A1Q9UMD9 1497 aaPredicted RBP23.88■■□□□ 1.41
CDC27-217ENST00000575483 KDM4FA0A1W2PPD8 638 aa23.88■■□□□ 1.41
CDC27-217ENST00000575483 WDR7Q9Y4E6 1490 aa23.86■■□□□ 1.41
CDC27-217ENST00000575483 TEX14Q8IWB6 1497 aa23.8■■□□□ 1.4
CDC27-217ENST00000575483 CFAP43Q8NDM7 1665 aa23.76■■□□□ 1.39
CDC27-217ENST00000575483 SAMD9Q5K651 1589 aa23.74■■□□□ 1.39
CDC27-217ENST00000575483 MAGI3Q5TCQ9 1506 aa23.73■■□□□ 1.39
CDC27-217ENST00000575483 ADGRL1O94910 1474 aa23.69■■□□□ 1.38
CDC27-217ENST00000575483 CD109Q6YHK3 1445 aa23.67■■□□□ 1.38
CDC27-217ENST00000575483 CSRNP3Q8WYN3 585 aa23.66■■□□□ 1.38
CDC27-217ENST00000575483 ATP10BO94823 1461 aa23.66■■□□□ 1.38
CDC27-217ENST00000575483 EEA1Q15075 1411 aa23.61■■□□□ 1.37
CDC27-217ENST00000575483 RAPGEF6Q8TEU7 1601 aa23.6■■□□□ 1.37
CDC27-217ENST00000575483 KCNH8Q96L42 1107 aa23.6■■□□□ 1.37
CDC27-217ENST00000575483 ABCA9Q8IUA7 1624 aa23.59■■□□□ 1.37
CDC27-217ENST00000575483 P3H3Q8IVL6 736 aa23.59■■□□□ 1.37
CDC27-217ENST00000575483 PPP4R3CPQ6ZMV5 832 aa23.57■■□□□ 1.36
CDC27-217ENST00000575483 ARAP3Q8WWN8 1544 aa23.55■■□□□ 1.36
CDC27-217ENST00000575483 NUP153P49790 1475 aaKnown RBP23.54■■□□□ 1.36
CDC27-217ENST00000575483 ARID3CA6NKF2 412 aa23.52■■□□□ 1.36
CDC27-217ENST00000575483 SCAF1Q9H7N4 1312 aaKnown RBP23.51■■□□□ 1.35
CDC27-217ENST00000575483 KIF21BO75037 1637 aa23.51■■□□□ 1.35
CDC27-217ENST00000575483 FHOD3Q2V2M9 1422 aa23.49■■□□□ 1.35
CDC27-217ENST00000575483 EFCAB5A4FU69 1503 aa23.43■■□□□ 1.34
CDC27-217ENST00000575483 PHLDB1Q86UU1 1377 aa23.42■■□□□ 1.34
CDC27-217ENST00000575483 FAM9AQ8IZU1 332 aaPredicted RBP23.42■■□□□ 1.34
CDC27-217ENST00000575483 FRMPD1Q5SYB0 1578 aa23.42■■□□□ 1.34
CDC27-217ENST00000575483 NEO1Q92859 1461 aa23.42■■□□□ 1.34
CDC27-217ENST00000575483 HECW2Q9P2P5 1572 aa23.4■■□□□ 1.34
CDC27-217ENST00000575483 RANGAP1P46060 587 aaPredicted RBP23.35■■□□□ 1.33
CDC27-217ENST00000575483 ADAMTSL3P82987 1691 aa23.33■■□□□ 1.33
CDC27-217ENST00000575483 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.33■■□□□ 1.32
CDC27-217ENST00000575483 TTC37Q6PGP7 1564 aa23.31■■□□□ 1.32
CDC27-217ENST00000575483 RICTORQ6R327 1708 aa23.31■■□□□ 1.32
CDC27-217ENST00000575483 RAPGEF3O95398 923 aa23.31■■□□□ 1.32
CDC27-217ENST00000575483 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.29■■□□□ 1.32
CDC27-217ENST00000575483 HNRNPUL2Q1KMD3 747 aaKnown RBP23.29■■□□□ 1.32
CDC27-217ENST00000575483 CDK13Q14004 1512 aaKnown RBP23.28■■□□□ 1.32
CDC27-217ENST00000575483 BCORL1Q5H9F3 1711 aa23.25■■□□□ 1.31
CDC27-217ENST00000575483 ARHGEF40Q8TER5 1519 aa23.25■■□□□ 1.31
CDC27-217ENST00000575483 PLEKHD1A6NEE1 506 aa23.25■■□□□ 1.31
CDC27-217ENST00000575483 CFAP74Q9C0B2 1584 aa23.25■■□□□ 1.31
CDC27-217ENST00000575483 FANCAO15360 1455 aa23.24■■□□□ 1.31
CDC27-217ENST00000575483 ARHGAP35Q9NRY4 1499 aa23.24■■□□□ 1.31
CDC27-217ENST00000575483 AKNAQ7Z591 1439 aa23.23■■□□□ 1.31
CDC27-217ENST00000575483 MAPK8IP2Q13387 824 aaPredicted RBP23.22■■□□□ 1.31
CDC27-217ENST00000575483 DENND4BO75064 1496 aaPredicted RBP23.21■■□□□ 1.31
CDC27-217ENST00000575483 PTPRMP28827 1452 aa23.21■■□□□ 1.31
CDC27-217ENST00000575483 ZMYM4Q5VZL5 1548 aa23.21■■□□□ 1.31
CDC27-217ENST00000575483 SIGLEC1Q9BZZ2 1709 aa23.19■■□□□ 1.3
CDC27-217ENST00000575483 HECW1Q76N89 1606 aa23.19■■□□□ 1.3
CDC27-217ENST00000575483 MADDQ8WXG6 1647 aa23.19■■□□□ 1.3
CDC27-217ENST00000575483 FMN1Q68DA7 1419 aa23.16■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms