RNA–Protein interactions for RNA: ENST00000575176.5

SMG6-216, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-216ENST00000575176 CARMIL1Q5VZK9 1371 aa15□□□□□ -0.01
SMG6-216ENST00000575176 IQGAP2Q13576 1575 aa14.99□□□□□ -0.01
SMG6-216ENST00000575176 RAPGEF2Q9Y4G8 1499 aa14.97□□□□□ -0.01
SMG6-216ENST00000575176 TRIM41Q8WV44 630 aa14.95□□□□□ -0.02
SMG6-216ENST00000575176 PRG4Q92954 1404 aaPredicted RBP14.94□□□□□ -0.02
SMG6-216ENST00000575176 DISP1Q96F81 1524 aa14.92□□□□□ -0.02
SMG6-216ENST00000575176 UGGT2Q9NYU1 1516 aa14.92□□□□□ -0.02
SMG6-216ENST00000575176 ADCY10Q96PN6 1610 aa14.92□□□□□ -0.02
SMG6-216ENST00000575176 KIAA0556O60303 1618 aa14.9□□□□□ -0.02
SMG6-216ENST00000575176 CYB5RLQ6IPT4 315 aa14.89□□□□□ -0.03
SMG6-216ENST00000575176 KIF21BO75037 1637 aa14.88□□□□□ -0.03
SMG6-216ENST00000575176 EEA1Q15075 1411 aa14.86□□□□□ -0.03
SMG6-216ENST00000575176 JPH4Q96JJ6 628 aa14.86□□□□□ -0.03
SMG6-216ENST00000575176 KIF13AQ9H1H9 1805 aa14.85□□□□□ -0.03
SMG6-216ENST00000575176 SAMD9Q5K651 1589 aa14.84□□□□□ -0.03
SMG6-216ENST00000575176 CHIC1Q5VXU3 224 aa14.83□□□□□ -0.04
SMG6-216ENST00000575176 MAPKBP1O60336 1514 aa14.79□□□□□ -0.04
SMG6-216ENST00000575176 DIP2BQ9P265 1576 aa14.75□□□□□ -0.05
SMG6-216ENST00000575176 ABCC2Q92887 1545 aa14.75□□□□□ -0.05
SMG6-216ENST00000575176 UHRF1BP1LA0JNW5 1464 aa14.75□□□□□ -0.05
SMG6-216ENST00000575176 ABCA8O94911 1581 aa14.74□□□□□ -0.05
SMG6-216ENST00000575176 TNIKQ9UKE5 1360 aa14.73□□□□□ -0.05
SMG6-216ENST00000575176 CSRNP3Q8WYN3 585 aa14.73□□□□□ -0.05
SMG6-216ENST00000575176 CARMIL2Q6F5E8 1435 aa14.73□□□□□ -0.05
SMG6-216ENST00000575176 ZCCHC11Q5TAX3 1644 aaKnown RBP14.72□□□□□ -0.05
SMG6-216ENST00000575176 KDM5BQ9UGL1 1544 aa14.69□□□□□ -0.06
SMG6-216ENST00000575176 GOLGA3Q08378 1498 aa14.69□□□□□ -0.06
SMG6-216ENST00000575176 PTPRGP23470 1445 aa14.68□□□□□ -0.06
SMG6-216ENST00000575176 PPRC1Q5VV67 1664 aaKnown RBP14.68□□□□□ -0.06
SMG6-216ENST00000575176 PLB1Q6P1J6 1458 aa14.67□□□□□ -0.06
SMG6-216ENST00000575176 UACAQ9BZF9 1416 aa14.66□□□□□ -0.06
SMG6-216ENST00000575176 ABCC10Q5T3U5 1492 aa14.65□□□□□ -0.06
SMG6-216ENST00000575176 EFCAB5A4FU69 1503 aa14.65□□□□□ -0.06
SMG6-216ENST00000575176 RAPGEF6Q8TEU7 1601 aa14.62□□□□□ -0.07
SMG6-216ENST00000575176 GLI2P10070 1586 aa14.61□□□□□ -0.07
SMG6-216ENST00000575176 MAP3K4Q9Y6R4 1608 aa14.6□□□□□ -0.07
SMG6-216ENST00000575176 LRRIQ1Q96JM4 1722 aa14.6□□□□□ -0.07
SMG6-216ENST00000575176 FAM9AQ8IZU1 332 aaPredicted RBP14.59□□□□□ -0.07
SMG6-216ENST00000575176 ARHGAP35Q9NRY4 1499 aa14.57□□□□□ -0.08
SMG6-216ENST00000575176 FHOD3Q2V2M9 1422 aa14.57□□□□□ -0.08
SMG6-216ENST00000575176 ASXL2Q76L83 1435 aa14.57□□□□□ -0.08
SMG6-216ENST00000575176 NUP153P49790 1475 aaKnown RBP14.56□□□□□ -0.08
SMG6-216ENST00000575176 TSPOAP1O95153 1857 aa14.55□□□□□ -0.08
SMG6-216ENST00000575176 EPRSP07814 1512 aaKnown RBP14.54□□□□□ -0.08
SMG6-216ENST00000575176 WDR7Q9Y4E6 1490 aa14.52□□□□□ -0.08
SMG6-216ENST00000575176 CFAP43Q8NDM7 1665 aa14.51□□□□□ -0.09
SMG6-216ENST00000575176 ATP10BO94823 1461 aa14.5□□□□□ -0.09
SMG6-216ENST00000575176 TRHP20396 242 aaPredicted RBP14.5□□□□□ -0.09
SMG6-216ENST00000575176 TTBK1Q5TCY1 1321 aaPredicted RBP14.48□□□□□ -0.09
SMG6-216ENST00000575176 ABCA9Q8IUA7 1624 aa14.48□□□□□ -0.09
SMG6-216ENST00000575176 PCF11O94913 1555 aaKnown RBP14.47□□□□□ -0.09
SMG6-216ENST00000575176 HECW1Q76N89 1606 aa14.45□□□□□ -0.1
SMG6-216ENST00000575176 P3H3Q8IVL6 736 aa14.44□□□□□ -0.1
SMG6-216ENST00000575176 CDK13Q14004 1512 aaKnown RBP14.44□□□□□ -0.1
SMG6-216ENST00000575176 KDM6BO15054 1643 aa14.43□□□□□ -0.1
SMG6-216ENST00000575176 FAM69CQ0P6D2 419 aa14.41□□□□□ -0.1
SMG6-216ENST00000575176 TTC37Q6PGP7 1564 aa14.41□□□□□ -0.1
SMG6-216ENST00000575176 NPM1P06748 294 aaKnown RBP eCLIP14.4□□□□□ -0.1
SMG6-216ENST00000575176 MAGI3Q5TCQ9 1506 aa14.39□□□□□ -0.11
SMG6-216ENST00000575176 COL17A1Q9UMD9 1497 aaPredicted RBP14.38□□□□□ -0.11
SMG6-216ENST00000575176 FMN1Q68DA7 1419 aa14.38□□□□□ -0.11
SMG6-216ENST00000575176 KIF14Q15058 1648 aa14.37□□□□□ -0.11
SMG6-216ENST00000575176 EHMT2Q96KQ7 1210 aa14.37□□□□□ -0.11
SMG6-216ENST00000575176 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.36□□□□□ -0.11
SMG6-216ENST00000575176 FRMPD1Q5SYB0 1578 aa14.35□□□□□ -0.11
SMG6-216ENST00000575176 UBTFP17480 764 aaKnown RBP14.35□□□□□ -0.11
SMG6-216ENST00000575176 CLIP1P30622 1438 aa14.34□□□□□ -0.11
SMG6-216ENST00000575176 FYCO1Q9BQS8 1478 aa14.34□□□□□ -0.11
SMG6-216ENST00000575176 RANGAP1P46060 587 aaPredicted RBP14.34□□□□□ -0.11
SMG6-216ENST00000575176 CASKIN1Q8WXD9 1431 aa14.33□□□□□ -0.11
SMG6-216ENST00000575176 TEX14Q8IWB6 1497 aa14.32□□□□□ -0.12
SMG6-216ENST00000575176 CEP162Q5TB80 1403 aa14.31□□□□□ -0.12
SMG6-216ENST00000575176 MYO5CQ9NQX4 1742 aa14.3□□□□□ -0.12
SMG6-216ENST00000575176 ARID3CA6NKF2 412 aa14.3□□□□□ -0.12
SMG6-216ENST00000575176 RICTORQ6R327 1708 aa14.29□□□□□ -0.12
SMG6-216ENST00000575176 CD109Q6YHK3 1445 aa14.29□□□□□ -0.12
SMG6-216ENST00000575176 CDC42BPBQ9Y5S2 1711 aa14.27□□□□□ -0.12
SMG6-216ENST00000575176 ARAP3Q8WWN8 1544 aa14.27□□□□□ -0.12
SMG6-216ENST00000575176 CCDC18Q5T9S5 1454 aa14.27□□□□□ -0.12
SMG6-216ENST00000575176 CDC42BPAQ5VT25 1732 aa14.27□□□□□ -0.13
SMG6-216ENST00000575176 PREX2Q70Z35 1606 aa14.26□□□□□ -0.13
SMG6-216ENST00000575176 CFAP74Q9C0B2 1584 aa14.26□□□□□ -0.13
SMG6-216ENST00000575176 TROQ12816 1431 aaPredicted RBP14.24□□□□□ -0.13
SMG6-216ENST00000575176 NEO1Q92859 1461 aa14.24□□□□□ -0.13
SMG6-216ENST00000575176 SIGLEC1Q9BZZ2 1709 aa14.22□□□□□ -0.13
SMG6-216ENST00000575176 ZMYM4Q5VZL5 1548 aa14.2□□□□□ -0.14
SMG6-216ENST00000575176 KCNH8Q96L42 1107 aa14.19□□□□□ -0.14
SMG6-216ENST00000575176 ARHGEF40Q8TER5 1519 aa14.18□□□□□ -0.14
SMG6-216ENST00000575176 FANCAO15360 1455 aa14.18□□□□□ -0.14
SMG6-216ENST00000575176 TIAM1Q13009 1591 aa14.17□□□□□ -0.14
SMG6-216ENST00000575176 ITSN2Q9NZM3 1697 aa14.17□□□□□ -0.14
SMG6-216ENST00000575176 PLCH2O75038 1416 aa14.16□□□□□ -0.14
SMG6-216ENST00000575176 LOC105371045A0A1W2PR82 267 aa14.16□□□□□ -0.14
SMG6-216ENST00000575176 ABCC1P33527 1531 aa14.15□□□□□ -0.14
SMG6-216ENST00000575176 EHBP1L1Q8N3D4 1523 aa14.15□□□□□ -0.14
SMG6-216ENST00000575176 KDM5CP41229 1560 aa14.15□□□□□ -0.14
SMG6-216ENST00000575176 VPS8Q8N3P4 1428 aa14.15□□□□□ -0.14
SMG6-216ENST00000575176 SAMD9LQ8IVG5 1584 aa14.14□□□□□ -0.15
SMG6-216ENST00000575176 AKNAQ7Z591 1439 aa14.13□□□□□ -0.15
SMG6-216ENST00000575176 PHLDB1Q86UU1 1377 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms