RNA–Protein interactions for RNA: ENST00000575087.5

ACTG1-208, Transcript of actin gamma 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene ACTG1, Length 2,001 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTG1-208ENST00000575087 TDRD9Q8NDG6 1382 aaKnown RBP25.22■■□□□ 1.63
ACTG1-208ENST00000575087 GAPVD1Q14C86 1478 aa25.21■■□□□ 1.63
ACTG1-208ENST00000575087 EFCAB5A4FU69 1503 aa25.19■■□□□ 1.62
ACTG1-208ENST00000575087 PCF11O94913 1555 aaKnown RBP25.18■■□□□ 1.62
ACTG1-208ENST00000575087 CFAP43Q8NDM7 1665 aa25.16■■□□□ 1.62
ACTG1-208ENST00000575087 FHAD1B1AJZ9 1412 aa25.16■■□□□ 1.62
ACTG1-208ENST00000575087 FHOD3Q2V2M9 1422 aa25.13■■□□□ 1.61
ACTG1-208ENST00000575087 LRRC9Q6ZRR7 1453 aa25.1■■□□□ 1.61
ACTG1-208ENST00000575087 MRC2Q9UBG0 1479 aa25.1■■□□□ 1.61
ACTG1-208ENST00000575087 P3H3Q8IVL6 736 aa25.1■■□□□ 1.61
ACTG1-208ENST00000575087 PBRM1Q86U86 1689 aa25.09■■□□□ 1.61
ACTG1-208ENST00000575087 CCNB3Q8WWL7 1395 aa25.08■■□□□ 1.6
ACTG1-208ENST00000575087 AQRO60306 1485 aaKnown RBP eCLIP25.05■■□□□ 1.64e-13■■■■■ 34.6
ACTG1-208ENST00000575087 FYCO1Q9BQS8 1478 aa25.05■■□□□ 1.6
ACTG1-208ENST00000575087 SAMD9Q5K651 1589 aa25.05■■□□□ 1.6
ACTG1-208ENST00000575087 CASKIN1Q8WXD9 1431 aa25.02■■□□□ 1.6
ACTG1-208ENST00000575087 SNAPC4Q5SXM2 1469 aa24.97■■□□□ 1.59
ACTG1-208ENST00000575087 WDR62O43379 1518 aa24.97■■□□□ 1.59
ACTG1-208ENST00000575087 ADAMTS12P58397 1594 aa24.96■■□□□ 1.59
ACTG1-208ENST00000575087 DHX57Q6P158 1386 aaKnown RBP24.95■■□□□ 1.59
ACTG1-208ENST00000575087 PHLDB1Q86UU1 1377 aa24.95■■□□□ 1.59
ACTG1-208ENST00000575087 FMN1Q68DA7 1419 aa24.95■■□□□ 1.58
ACTG1-208ENST00000575087 SCAF1Q9H7N4 1312 aaKnown RBP24.93■■□□□ 1.58
ACTG1-208ENST00000575087 LRRIQ1Q96JM4 1722 aa24.92■■□□□ 1.58
ACTG1-208ENST00000575087 IFT140Q96RY7 1462 aa24.89■■□□□ 1.57
ACTG1-208ENST00000575087 ATP1B4Q9UN42 357 aaPredicted RBP24.88■■□□□ 1.57
ACTG1-208ENST00000575087 GRIN2BQ13224 1484 aa24.88■■□□□ 1.57
ACTG1-208ENST00000575087 CLSPNQ9HAW4 1339 aa24.86■■□□□ 1.57
ACTG1-208ENST00000575087 ZNF608Q9ULD9 1512 aaPredicted RBP24.86■■□□□ 1.57
ACTG1-208ENST00000575087 IQGAP2Q13576 1575 aa24.82■■□□□ 1.56
ACTG1-208ENST00000575087 ITGAEP38570 1179 aa24.82■■□□□ 1.56
ACTG1-208ENST00000575087 THOC2Q8NI27 1593 aaKnown RBP24.82■■□□□ 1.56
ACTG1-208ENST00000575087 ZNF316A6NFI3 1004 aaPredicted RBP24.81■■□□□ 1.56
ACTG1-208ENST00000575087 DIEXFQ68CQ4 756 aaKnown RBP24.79■■□□□ 1.56
ACTG1-208ENST00000575087 EIF4G3O43432 1585 aaKnown RBP24.76■■□□□ 1.55
ACTG1-208ENST00000575087 RAB3GAP2Q9H2M9 1393 aa24.75■■□□□ 1.55
ACTG1-208ENST00000575087 ERCC6Q03468 1493 aa24.73■■□□□ 1.55
ACTG1-208ENST00000575087 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.71■■□□□ 1.555e-7■□□□□ 8.4
ACTG1-208ENST00000575087 FAM50AQ14320 339 aaKnown RBP24.71■■□□□ 1.55
ACTG1-208ENST00000575087 SETD5Q9C0A6 1442 aa24.7■■□□□ 1.55
ACTG1-208ENST00000575087 UGGT2Q9NYU1 1516 aa24.69■■□□□ 1.54
ACTG1-208ENST00000575087 MTUS2Q5JR59 1369 aa24.69■■□□□ 1.54
ACTG1-208ENST00000575087 FGD6Q6ZV73 1430 aa24.68■■□□□ 1.54
ACTG1-208ENST00000575087 EHBP1L1Q8N3D4 1523 aa24.67■■□□□ 1.54
ACTG1-208ENST00000575087 SUPT6HQ7KZ85 1726 aaKnown RBP24.67■■□□□ 1.54
ACTG1-208ENST00000575087 HECW1Q76N89 1606 aa24.66■■□□□ 1.54
ACTG1-208ENST00000575087 MAPKBP1O60336 1514 aa24.66■■□□□ 1.54
ACTG1-208ENST00000575087 MAGI3Q5TCQ9 1506 aa24.65■■□□□ 1.54
ACTG1-208ENST00000575087 NCOA2Q15596 1464 aa24.64■■□□□ 1.54
ACTG1-208ENST00000575087 CCDC18Q5T9S5 1454 aa24.64■■□□□ 1.53
ACTG1-208ENST00000575087 GRIN2AQ12879 1464 aa24.63■■□□□ 1.53
ACTG1-208ENST00000575087 KIAA0586Q9BVV6 1533 aa24.62■■□□□ 1.53
ACTG1-208ENST00000575087 ARHGEF11O15085 1522 aa24.61■■□□□ 1.53
ACTG1-208ENST00000575087 KIAA0556O60303 1618 aa24.58■■□□□ 1.53
ACTG1-208ENST00000575087 MYOM3Q5VTT5 1437 aa24.58■■□□□ 1.53
ACTG1-208ENST00000575087 EPRSP07814 1512 aaKnown RBP24.57■■□□□ 1.52
ACTG1-208ENST00000575087 DISP1Q96F81 1524 aa24.57■■□□□ 1.52
ACTG1-208ENST00000575087 MAGI1Q96QZ7 1491 aaPredicted RBP24.57■■□□□ 1.52
ACTG1-208ENST00000575087 CDK13Q14004 1512 aaKnown RBP24.53■■□□□ 1.52
ACTG1-208ENST00000575087 ACIN1Q9UKV3 1341 aaKnown RBP24.52■■□□□ 1.52
ACTG1-208ENST00000575087 PTPRKQ15262 1439 aa24.52■■□□□ 1.52
ACTG1-208ENST00000575087 PTPN23Q9H3S7 1636 aa24.51■■□□□ 1.51
ACTG1-208ENST00000575087 CEP170Q5SW79 1584 aa24.51■■□□□ 1.51
ACTG1-208ENST00000575087 MYT1Q01538 1121 aa24.51■■□□□ 1.51
ACTG1-208ENST00000575087 SYNJ2O15056 1496 aa24.5■■□□□ 1.51
ACTG1-208ENST00000575087 TCOF1Q13428 1488 aaKnown RBP24.44■■□□□ 1.5
ACTG1-208ENST00000575087 HFM1A2PYH4 1435 aa24.44■■□□□ 1.5
ACTG1-208ENST00000575087 RAPGEF6Q8TEU7 1601 aa24.43■■□□□ 1.5
ACTG1-208ENST00000575087 NUP153P49790 1475 aaKnown RBP24.4■■□□□ 1.5
ACTG1-208ENST00000575087 NUP160Q12769 1436 aa24.39■■□□□ 1.49
ACTG1-208ENST00000575087 CHMP7Q8WUX9 453 aaPredicted RBP24.39■■□□□ 1.49
ACTG1-208ENST00000575087 NAIPQ13075 1403 aa24.38■■□□□ 1.49
ACTG1-208ENST00000575087 ARID3CA6NKF2 412 aa24.35■■□□□ 1.49
ACTG1-208ENST00000575087 NEUROD1Q13562 356 aa24.35■■□□□ 1.49
ACTG1-208ENST00000575087 MIER1Q8N108 512 aa24.34■■□□□ 1.49
ACTG1-208ENST00000575087 MIA2Q96PC5 1412 aa24.34■■□□□ 1.49
ACTG1-208ENST00000575087 SIN3AQ96ST3 1273 aa24.34■■□□□ 1.49
ACTG1-208ENST00000575087 CENPBP07199 599 aaPredicted RBP24.33■■□□□ 1.49
ACTG1-208ENST00000575087 GCC2Q8IWJ2 1684 aa24.32■■□□□ 1.48
ACTG1-208ENST00000575087 UACAQ9BZF9 1416 aa24.31■■□□□ 1.48
ACTG1-208ENST00000575087 FBLN2P98095 1184 aa24.29■■□□□ 1.48
ACTG1-208ENST00000575087 PLB1Q6P1J6 1458 aa24.26■■□□□ 1.47
ACTG1-208ENST00000575087 AKNAQ7Z591 1439 aa24.25■■□□□ 1.47
ACTG1-208ENST00000575087 CARMIL2Q6F5E8 1435 aa24.23■■□□□ 1.47
ACTG1-208ENST00000575087 JPH4Q96JJ6 628 aa24.23■■□□□ 1.47
ACTG1-208ENST00000575087 TIMELESSQ9UNS1 1208 aa24.22■■□□□ 1.47
ACTG1-208ENST00000575087 KDM6BO15054 1643 aa24.21■■□□□ 1.47
ACTG1-208ENST00000575087 GTF3C3Q9Y5Q9 886 aa24.2■■□□□ 1.46
ACTG1-208ENST00000575087 TROQ12816 1431 aaPredicted RBP24.19■■□□□ 1.46
ACTG1-208ENST00000575087 ADCY10Q96PN6 1610 aa24.19■■□□□ 1.46
ACTG1-208ENST00000575087 DNMT1P26358 1616 aaKnown RBP24.18■■□□□ 1.46
ACTG1-208ENST00000575087 PRG4Q92954 1404 aaPredicted RBP24.18■■□□□ 1.46
ACTG1-208ENST00000575087 RRP7BPQ9NSQ0 103 aa24.18■■□□□ 1.46
ACTG1-208ENST00000575087 CHIC2Q9UKJ5 165 aa24.18■■□□□ 1.46
ACTG1-208ENST00000575087 ABCA8O94911 1581 aa24.17■■□□□ 1.46
ACTG1-208ENST00000575087 CDK11AQ9UQ88 783 aaPredicted RBP24.16■■□□□ 1.46
ACTG1-208ENST00000575087 KIF14Q15058 1648 aa24.15■■□□□ 1.46
ACTG1-208ENST00000575087 DAPK1P53355 1430 aa24.15■■□□□ 1.46
ACTG1-208ENST00000575087 DENND4BO75064 1496 aaPredicted RBP24.13■■□□□ 1.45
ACTG1-208ENST00000575087 ITSN2Q9NZM3 1697 aa24.13■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms