RNA–Protein interactions for RNA: ENST00000574545.1

SCARF1-208, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 894 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-208ENST00000574545 RUSC2Q8N2Y8 1516 aa33.84■■■■□ 3.01
SCARF1-208ENST00000574545 PRG4Q92954 1404 aaPredicted RBP33.81■■■■□ 3
SCARF1-208ENST00000574545 KIAA0586Q9BVV6 1533 aa33.78■■■■□ 3
SCARF1-208ENST00000574545 TRHP20396 242 aaPredicted RBP33.71■■■□□ 2.99
SCARF1-208ENST00000574545 RAPGEF2Q9Y4G8 1499 aa33.57■■■□□ 2.97
SCARF1-208ENST00000574545 IQGAP2Q13576 1575 aa33.46■■■□□ 2.95
SCARF1-208ENST00000574545 PRXQ9BXM0 1461 aa33.4■■■□□ 2.94
SCARF1-208ENST00000574545 CARMIL2Q6F5E8 1435 aa33.37■■■□□ 2.93
SCARF1-208ENST00000574545 PTPRGP23470 1445 aa33.36■■■□□ 2.93
SCARF1-208ENST00000574545 ADCY10Q96PN6 1610 aa33.35■■■□□ 2.93
SCARF1-208ENST00000574545 TNIKQ9UKE5 1360 aa33.34■■■□□ 2.93
SCARF1-208ENST00000574545 DISP1Q96F81 1524 aa33.34■■■□□ 2.93
SCARF1-208ENST00000574545 UGGT2Q9NYU1 1516 aa33.33■■■□□ 2.93
SCARF1-208ENST00000574545 NPM1P06748 294 aaKnown RBP eCLIP33.27■■■□□ 2.92
SCARF1-208ENST00000574545 CSRNP3Q8WYN3 585 aa33.25■■■□□ 2.91
SCARF1-208ENST00000574545 MAPKBP1O60336 1514 aa33.23■■■□□ 2.91
SCARF1-208ENST00000574545 TTBK1Q5TCY1 1321 aaPredicted RBP33.21■■■□□ 2.91
SCARF1-208ENST00000574545 CTTNBP2Q8WZ74 1663 aa33.2■■■□□ 2.9
SCARF1-208ENST00000574545 KIF13AQ9H1H9 1805 aa33.18■■■□□ 2.9
SCARF1-208ENST00000574545 KIAA0556O60303 1618 aa33.17■■■□□ 2.9
SCARF1-208ENST00000574545 ABCC10Q5T3U5 1492 aa33.17■■■□□ 2.9
SCARF1-208ENST00000574545 EEA1Q15075 1411 aa33.16■■■□□ 2.9
SCARF1-208ENST00000574545 UHRF1BP1LA0JNW5 1464 aa33.13■■■□□ 2.89
SCARF1-208ENST00000574545 UACAQ9BZF9 1416 aa33.12■■■□□ 2.89
SCARF1-208ENST00000574545 ABCC2Q92887 1545 aa33.11■■■□□ 2.89
SCARF1-208ENST00000574545 CHIC1Q5VXU3 224 aa33.1■■■□□ 2.89
SCARF1-208ENST00000574545 FAM69CQ0P6D2 419 aa33.09■■■□□ 2.89
SCARF1-208ENST00000574545 DIP2BQ9P265 1576 aa33.05■■■□□ 2.88
SCARF1-208ENST00000574545 GOLGA3Q08378 1498 aa33.05■■■□□ 2.88
SCARF1-208ENST00000574545 KDM5BQ9UGL1 1544 aa32.98■■■□□ 2.87
SCARF1-208ENST00000574545 FAM9AQ8IZU1 332 aaPredicted RBP32.98■■■□□ 2.87
SCARF1-208ENST00000574545 ASXL2Q76L83 1435 aa32.95■■■□□ 2.87
SCARF1-208ENST00000574545 PLB1Q6P1J6 1458 aa32.93■■■□□ 2.86
SCARF1-208ENST00000574545 ABCA8O94911 1581 aa32.87■■■□□ 2.85
SCARF1-208ENST00000574545 ZCCHC11Q5TAX3 1644 aaKnown RBP32.84■■■□□ 2.85
SCARF1-208ENST00000574545 KIF21BO75037 1637 aa32.84■■■□□ 2.85
SCARF1-208ENST00000574545 SAMD9Q5K651 1589 aa32.83■■■□□ 2.85
SCARF1-208ENST00000574545 P3H3Q8IVL6 736 aa32.82■■■□□ 2.84
SCARF1-208ENST00000574545 GLI2P10070 1586 aa32.82■■■□□ 2.84
SCARF1-208ENST00000574545 EPRSP07814 1512 aaKnown RBP32.77■■■□□ 2.84
SCARF1-208ENST00000574545 TSPOAP1O95153 1857 aa32.73■■■□□ 2.83
SCARF1-208ENST00000574545 WDR7Q9Y4E6 1490 aa32.69■■■□□ 2.82
SCARF1-208ENST00000574545 PPRC1Q5VV67 1664 aaKnown RBP32.66■■■□□ 2.82
SCARF1-208ENST00000574545 RANGAP1P46060 587 aaPredicted RBP32.64■■■□□ 2.82
SCARF1-208ENST00000574545 ATP10BO94823 1461 aa32.62■■■□□ 2.81
SCARF1-208ENST00000574545 MAP3K4Q9Y6R4 1608 aa32.62■■■□□ 2.81
SCARF1-208ENST00000574545 FHOD3Q2V2M9 1422 aa32.61■■■□□ 2.81
SCARF1-208ENST00000574545 KDM6BO15054 1643 aa32.59■■■□□ 2.81
SCARF1-208ENST00000574545 UBTFP17480 764 aaKnown RBP32.57■■■□□ 2.8
SCARF1-208ENST00000574545 EFCAB5A4FU69 1503 aa32.56■■■□□ 2.8
SCARF1-208ENST00000574545 RAPGEF6Q8TEU7 1601 aa32.56■■■□□ 2.8
SCARF1-208ENST00000574545 EHMT2Q96KQ7 1210 aa32.55■■■□□ 2.8
SCARF1-208ENST00000574545 ARID3CA6NKF2 412 aa32.54■■■□□ 2.8
SCARF1-208ENST00000574545 KCNH8Q96L42 1107 aa32.54■■■□□ 2.8
SCARF1-208ENST00000574545 NUP153P49790 1475 aaKnown RBP32.5■■■□□ 2.79
SCARF1-208ENST00000574545 COL17A1Q9UMD9 1497 aaPredicted RBP32.48■■■□□ 2.79
SCARF1-208ENST00000574545 TEX14Q8IWB6 1497 aa32.47■■■□□ 2.79
SCARF1-208ENST00000574545 CD109Q6YHK3 1445 aa32.45■■■□□ 2.79
SCARF1-208ENST00000574545 CFAP43Q8NDM7 1665 aa32.44■■■□□ 2.78
SCARF1-208ENST00000574545 MAGI3Q5TCQ9 1506 aa32.44■■■□□ 2.78
SCARF1-208ENST00000574545 ARHGAP35Q9NRY4 1499 aa32.41■■■□□ 2.78
SCARF1-208ENST00000574545 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP32.35■■■□□ 2.77
SCARF1-208ENST00000574545 HNRNPUL2Q1KMD3 747 aaKnown RBP32.35■■■□□ 2.77
SCARF1-208ENST00000574545 ABCA9Q8IUA7 1624 aa32.31■■■□□ 2.76
SCARF1-208ENST00000574545 AEBP2Q6ZN18 517 aaPredicted RBP32.3■■■□□ 2.76
SCARF1-208ENST00000574545 FMN1Q68DA7 1419 aa32.28■■■□□ 2.76
SCARF1-208ENST00000574545 PLEKHD1A6NEE1 506 aa32.27■■■□□ 2.76
SCARF1-208ENST00000574545 CDK13Q14004 1512 aaKnown RBP32.2■■■□□ 2.74
SCARF1-208ENST00000574545 KDM4FA0A1W2PPD8 638 aa32.18■■■□□ 2.74
SCARF1-208ENST00000574545 ARAP3Q8WWN8 1544 aa32.17■■■□□ 2.74
SCARF1-208ENST00000574545 PHLDB1Q86UU1 1377 aa32.16■■■□□ 2.74
SCARF1-208ENST00000574545 HECW1Q76N89 1606 aa32.14■■■□□ 2.74
SCARF1-208ENST00000574545 NEO1Q92859 1461 aa32.1■■■□□ 2.73
SCARF1-208ENST00000574545 ATP1B4Q9UN42 357 aaPredicted RBP32.1■■■□□ 2.73
SCARF1-208ENST00000574545 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP32.1■■■□□ 2.73
SCARF1-208ENST00000574545 CLIP1P30622 1438 aa32.02■■■□□ 2.72
SCARF1-208ENST00000574545 CASKIN1Q8WXD9 1431 aa32.02■■■□□ 2.72
SCARF1-208ENST00000574545 TTC37Q6PGP7 1564 aa32.02■■■□□ 2.72
SCARF1-208ENST00000574545 CDK11AQ9UQ88 783 aaPredicted RBP32.01■■■□□ 2.71
SCARF1-208ENST00000574545 LRRIQ1Q96JM4 1722 aa32■■■□□ 2.71
SCARF1-208ENST00000574545 RAPGEF3O95398 923 aa31.99■■■□□ 2.71
SCARF1-208ENST00000574545 PCF11O94913 1555 aaKnown RBP31.95■■■□□ 2.71
SCARF1-208ENST00000574545 AKNAQ7Z591 1439 aa31.95■■■□□ 2.71
SCARF1-208ENST00000574545 ADGRL1O94910 1474 aa31.95■■■□□ 2.7
SCARF1-208ENST00000574545 TROQ12816 1431 aaPredicted RBP31.94■■■□□ 2.7
SCARF1-208ENST00000574545 FANCAO15360 1455 aa31.94■■■□□ 2.7
SCARF1-208ENST00000574545 PLCH2O75038 1416 aa31.93■■■□□ 2.7
SCARF1-208ENST00000574545 FRMPD1Q5SYB0 1578 aa31.91■■■□□ 2.7
SCARF1-208ENST00000574545 CCDC18Q5T9S5 1454 aa31.88■■■□□ 2.69
SCARF1-208ENST00000574545 KIF14Q15058 1648 aa31.88■■■□□ 2.69
SCARF1-208ENST00000574545 FYCO1Q9BQS8 1478 aa31.87■■■□□ 2.69
SCARF1-208ENST00000574545 CFAP74Q9C0B2 1584 aa31.86■■■□□ 2.69
SCARF1-208ENST00000574545 DENND4BO75064 1496 aaPredicted RBP31.86■■■□□ 2.69
SCARF1-208ENST00000574545 RICTORQ6R327 1708 aa31.81■■■□□ 2.68
SCARF1-208ENST00000574545 EFCAB2Q5VUJ9 269 aa31.79■■■□□ 2.68
SCARF1-208ENST00000574545 MYO5CQ9NQX4 1742 aa31.78■■■□□ 2.68
SCARF1-208ENST00000574545 CEP162Q5TB80 1403 aa31.77■■■□□ 2.68
SCARF1-208ENST00000574545 SCAPERQ9BY12 1400 aa31.75■■■□□ 2.67
SCARF1-208ENST00000574545 LOC105371045A0A1W2PR82 267 aa31.73■■■□□ 2.67
SCARF1-208ENST00000574545 ZMYM4Q5VZL5 1548 aa31.72■■■□□ 2.67
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms