RNA–Protein interactions for RNA: ENST00000574224.1

ABCC1-205, Transcript of ATP binding cassette subfamily C member 1, humanhuman

TSL 1 (best)

Gene ABCC1, Length 1,543 nt, Biotype retained intron, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCC1-205ENST00000574224 RAPGEF2Q9Y4G8 1499 aa19.63■□□□□ 0.73
ABCC1-205ENST00000574224 FAM9AQ8IZU1 332 aaPredicted RBP19.59■□□□□ 0.73
ABCC1-205ENST00000574224 JPH4Q96JJ6 628 aa19.59■□□□□ 0.73
ABCC1-205ENST00000574224 KIAA0586Q9BVV6 1533 aa19.59■□□□□ 0.73
ABCC1-205ENST00000574224 ARAP1Q96P48 1450 aa19.59■□□□□ 0.73
ABCC1-205ENST00000574224 CSRNP3Q8WYN3 585 aa19.58■□□□□ 0.73
ABCC1-205ENST00000574224 PRG4Q92954 1404 aaPredicted RBP19.56■□□□□ 0.72
ABCC1-205ENST00000574224 PRXQ9BXM0 1461 aa19.52■□□□□ 0.72
ABCC1-205ENST00000574224 SHROOM2Q13796 1616 aa19.51■□□□□ 0.71
ABCC1-205ENST00000574224 ERCC6L2Q5T890 1561 aa19.47■□□□□ 0.71
ABCC1-205ENST00000574224 IQGAP2Q13576 1575 aa19.47■□□□□ 0.71
ABCC1-205ENST00000574224 CARMIL2Q6F5E8 1435 aa19.46■□□□□ 0.71
ABCC1-205ENST00000574224 KIF21BO75037 1637 aa19.4■□□□□ 0.7
ABCC1-205ENST00000574224 TTBK1Q5TCY1 1321 aaPredicted RBP19.4■□□□□ 0.7
ABCC1-205ENST00000574224 GOLGA3Q08378 1498 aa19.37■□□□□ 0.69
ABCC1-205ENST00000574224 TNIKQ9UKE5 1360 aa19.36■□□□□ 0.69
ABCC1-205ENST00000574224 EHMT2Q96KQ7 1210 aa19.35■□□□□ 0.69
ABCC1-205ENST00000574224 PTPRGP23470 1445 aa19.35■□□□□ 0.69
ABCC1-205ENST00000574224 UGGT2Q9NYU1 1516 aa19.34■□□□□ 0.69
ABCC1-205ENST00000574224 CTTNBP2Q8WZ74 1663 aa19.32■□□□□ 0.68
ABCC1-205ENST00000574224 UBTFP17480 764 aaKnown RBP19.31■□□□□ 0.68
ABCC1-205ENST00000574224 NPM1P06748 294 aaKnown RBP eCLIP19.3■□□□□ 0.68
ABCC1-205ENST00000574224 TRHP20396 242 aaPredicted RBP19.3■□□□□ 0.68
ABCC1-205ENST00000574224 DISP1Q96F81 1524 aa19.29■□□□□ 0.68
ABCC1-205ENST00000574224 RANGAP1P46060 587 aaPredicted RBP19.29■□□□□ 0.68
ABCC1-205ENST00000574224 KIAA0556O60303 1618 aa19.27■□□□□ 0.67
ABCC1-205ENST00000574224 CEP162Q5TB80 1403 aa19.23■□□□□ 0.67
ABCC1-205ENST00000574224 P3H3Q8IVL6 736 aa19.21■□□□□ 0.67
ABCC1-205ENST00000574224 TRIM26Q12899 539 aaPredicted RBP19.2■□□□□ 0.66
ABCC1-205ENST00000574224 UACAQ9BZF9 1416 aa19.2■□□□□ 0.66
ABCC1-205ENST00000574224 PCGF6Q9BYE7 350 aa19.17■□□□□ 0.66
ABCC1-205ENST00000574224 ADCY10Q96PN6 1610 aa19.16■□□□□ 0.66
ABCC1-205ENST00000574224 ABCC2Q92887 1545 aa19.13■□□□□ 0.65
ABCC1-205ENST00000574224 UHRF1BP1LA0JNW5 1464 aa19.13■□□□□ 0.65
ABCC1-205ENST00000574224 EFCAB5A4FU69 1503 aa19.11■□□□□ 0.65
ABCC1-205ENST00000574224 SAMD9Q5K651 1589 aa19.11■□□□□ 0.65
ABCC1-205ENST00000574224 PLB1Q6P1J6 1458 aa19.1■□□□□ 0.65
ABCC1-205ENST00000574224 FHOD3Q2V2M9 1422 aa19.1■□□□□ 0.65
ABCC1-205ENST00000574224 MAPKBP1O60336 1514 aa19.08■□□□□ 0.64
ABCC1-205ENST00000574224 FAM69CQ0P6D2 419 aa19.05■□□□□ 0.64
ABCC1-205ENST00000574224 ARID3CA6NKF2 412 aa19.03■□□□□ 0.64
ABCC1-205ENST00000574224 KDM5BQ9UGL1 1544 aa19.03■□□□□ 0.64
ABCC1-205ENST00000574224 ABCA8O94911 1581 aa19.03■□□□□ 0.64
ABCC1-205ENST00000574224 CLIP1P30622 1438 aa19.02■□□□□ 0.63
ABCC1-205ENST00000574224 ASXL2Q76L83 1435 aa19.02■□□□□ 0.63
ABCC1-205ENST00000574224 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.01■□□□□ 0.63
ABCC1-205ENST00000574224 HNRNPUL2Q1KMD3 747 aaKnown RBP19.01■□□□□ 0.63
ABCC1-205ENST00000574224 ABCC10Q5T3U5 1492 aa19■□□□□ 0.63
ABCC1-205ENST00000574224 ARHGAP35Q9NRY4 1499 aa18.99■□□□□ 0.63
ABCC1-205ENST00000574224 FMN1Q68DA7 1419 aa18.98■□□□□ 0.63
ABCC1-205ENST00000574224 ATP1B4Q9UN42 357 aaPredicted RBP18.96■□□□□ 0.63
ABCC1-205ENST00000574224 ZCCHC11Q5TAX3 1644 aaKnown RBP18.96■□□□□ 0.63
ABCC1-205ENST00000574224 RAPGEF6Q8TEU7 1601 aa18.95■□□□□ 0.62
ABCC1-205ENST00000574224 WDR7Q9Y4E6 1490 aa18.93■□□□□ 0.62
ABCC1-205ENST00000574224 DIP2BQ9P265 1576 aa18.93■□□□□ 0.62
ABCC1-205ENST00000574224 HRCP23327 699 aa18.93■□□□□ 0.62
ABCC1-205ENST00000574224 VPS8Q8N3P4 1428 aa18.92■□□□□ 0.62
ABCC1-205ENST00000574224 KCNH8Q96L42 1107 aa18.9■□□□□ 0.62
ABCC1-205ENST00000574224 ATP10BO94823 1461 aa18.9■□□□□ 0.62
ABCC1-205ENST00000574224 NUP153P49790 1475 aaKnown RBP18.9■□□□□ 0.62
ABCC1-205ENST00000574224 EPRSP07814 1512 aaKnown RBP18.88■□□□□ 0.61
ABCC1-205ENST00000574224 PLEKHD1A6NEE1 506 aa18.85■□□□□ 0.61
ABCC1-205ENST00000574224 HECW1Q76N89 1606 aa18.84■□□□□ 0.61
ABCC1-205ENST00000574224 KIF13AQ9H1H9 1805 aa18.84■□□□□ 0.61
ABCC1-205ENST00000574224 GLI2P10070 1586 aa18.83■□□□□ 0.6
ABCC1-205ENST00000574224 CDK11AQ9UQ88 783 aaPredicted RBP18.83■□□□□ 0.6
ABCC1-205ENST00000574224 CASKIN1Q8WXD9 1431 aa18.78■□□□□ 0.6
ABCC1-205ENST00000574224 CDK13Q14004 1512 aaKnown RBP18.78■□□□□ 0.6
ABCC1-205ENST00000574224 CD109Q6YHK3 1445 aa18.77■□□□□ 0.6
ABCC1-205ENST00000574224 TEX14Q8IWB6 1497 aa18.77■□□□□ 0.6
ABCC1-205ENST00000574224 PCF11O94913 1555 aaKnown RBP18.75■□□□□ 0.59
ABCC1-205ENST00000574224 FYCO1Q9BQS8 1478 aa18.75■□□□□ 0.59
ABCC1-205ENST00000574224 CCDC18Q5T9S5 1454 aa18.73■□□□□ 0.59
ABCC1-205ENST00000574224 APLP2Q06481 763 aa18.73■□□□□ 0.59
ABCC1-205ENST00000574224 TSPOAP1O95153 1857 aa18.72■□□□□ 0.59
ABCC1-205ENST00000574224 MAP3K4Q9Y6R4 1608 aa18.71■□□□□ 0.59
ABCC1-205ENST00000574224 PPARGC1BQ86YN6 1023 aaKnown RBP18.7■□□□□ 0.58
ABCC1-205ENST00000574224 MAGI3Q5TCQ9 1506 aa18.68■□□□□ 0.58
ABCC1-205ENST00000574224 CFAP43Q8NDM7 1665 aa18.68■□□□□ 0.58
ABCC1-205ENST00000574224 ZEB1P37275 1124 aaPredicted RBP18.68■□□□□ 0.58
ABCC1-205ENST00000574224 TROQ12816 1431 aaPredicted RBP18.66■□□□□ 0.58
ABCC1-205ENST00000574224 KDM6BO15054 1643 aa18.66■□□□□ 0.58
ABCC1-205ENST00000574224 ABCA9Q8IUA7 1624 aa18.66■□□□□ 0.58
ABCC1-205ENST00000574224 PPRC1Q5VV67 1664 aaKnown RBP18.61■□□□□ 0.57
ABCC1-205ENST00000574224 KIF14Q15058 1648 aa18.61■□□□□ 0.57
ABCC1-205ENST00000574224 MAP3K1Q13233 1512 aa18.61■□□□□ 0.57
ABCC1-205ENST00000574224 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.61■□□□□ 0.57
ABCC1-205ENST00000574224 MTUS2Q5JR59 1369 aa18.61■□□□□ 0.57
ABCC1-205ENST00000574224 PHLDB1Q86UU1 1377 aa18.6■□□□□ 0.57
ABCC1-205ENST00000574224 NEO1Q92859 1461 aa18.57■□□□□ 0.56
ABCC1-205ENST00000574224 TTC37Q6PGP7 1564 aa18.57■□□□□ 0.56
ABCC1-205ENST00000574224 FANCAO15360 1455 aa18.56■□□□□ 0.56
ABCC1-205ENST00000574224 PLCH2O75038 1416 aa18.54■□□□□ 0.56
ABCC1-205ENST00000574224 LRRIQ1Q96JM4 1722 aa18.54■□□□□ 0.56
ABCC1-205ENST00000574224 EFCAB2Q5VUJ9 269 aa18.54■□□□□ 0.56
ABCC1-205ENST00000574224 COL17A1Q9UMD9 1497 aaPredicted RBP18.53■□□□□ 0.56
ABCC1-205ENST00000574224 TIAM1Q13009 1591 aa18.52■□□□□ 0.56
ABCC1-205ENST00000574224 AKNAQ7Z591 1439 aa18.51■□□□□ 0.55
ABCC1-205ENST00000574224 CFAP74Q9C0B2 1584 aa18.5■□□□□ 0.55
ABCC1-205ENST00000574224 ARHGAP5Q13017 1502 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms