RNA–Protein interactions for RNA: ENST00000574070.5

CLDN7-207, Transcript of claudin 7, humanhuman

TSL 1 (best)

Gene CLDN7, Length 485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN7-207ENST00000574070 NUP160Q12769 1436 aa28.98■■■□□ 2.23
CLDN7-207ENST00000574070 RAPGEF2Q9Y4G8 1499 aa28.83■■■□□ 2.21
CLDN7-207ENST00000574070 FAM9AQ8IZU1 332 aaPredicted RBP28.81■■■□□ 2.2
CLDN7-207ENST00000574070 CSRNP3Q8WYN3 585 aa28.78■■■□□ 2.2
CLDN7-207ENST00000574070 EEA1Q15075 1411 aa28.77■■■□□ 2.2
CLDN7-207ENST00000574070 JPH4Q96JJ6 628 aa28.76■■■□□ 2.19
CLDN7-207ENST00000574070 KIAA0586Q9BVV6 1533 aa28.74■■■□□ 2.19
CLDN7-207ENST00000574070 SHROOM2Q13796 1616 aa28.72■■■□□ 2.19
CLDN7-207ENST00000574070 PRXQ9BXM0 1461 aa28.69■■■□□ 2.18
CLDN7-207ENST00000574070 PRG4Q92954 1404 aaPredicted RBP28.69■■■□□ 2.18
CLDN7-207ENST00000574070 ERCC6L2Q5T890 1561 aa28.67■■■□□ 2.18
CLDN7-207ENST00000574070 IQGAP2Q13576 1575 aa28.61■■■□□ 2.17
CLDN7-207ENST00000574070 CTTNBP2Q8WZ74 1663 aa28.52■■■□□ 2.16
CLDN7-207ENST00000574070 KIF13AQ9H1H9 1805 aa28.5■■■□□ 2.15
CLDN7-207ENST00000574070 CARMIL2Q6F5E8 1435 aa28.5■■■□□ 2.15
CLDN7-207ENST00000574070 EHMT2Q96KQ7 1210 aa28.48■■■□□ 2.15
CLDN7-207ENST00000574070 TTBK1Q5TCY1 1321 aaPredicted RBP28.47■■■□□ 2.15
CLDN7-207ENST00000574070 KIF21BO75037 1637 aa28.44■■■□□ 2.14
CLDN7-207ENST00000574070 UGGT2Q9NYU1 1516 aa28.43■■■□□ 2.14
CLDN7-207ENST00000574070 TNIKQ9UKE5 1360 aa28.38■■■□□ 2.13
CLDN7-207ENST00000574070 DISP1Q96F81 1524 aa28.38■■■□□ 2.13
CLDN7-207ENST00000574070 PTPRGP23470 1445 aa28.37■■■□□ 2.13
CLDN7-207ENST00000574070 UBTFP17480 764 aaKnown RBP28.36■■■□□ 2.13
CLDN7-207ENST00000574070 RANGAP1P46060 587 aaPredicted RBP28.34■■■□□ 2.13
CLDN7-207ENST00000574070 GOLGA3Q08378 1498 aa28.34■■■□□ 2.13
CLDN7-207ENST00000574070 KIAA0556O60303 1618 aa28.33■■■□□ 2.13
CLDN7-207ENST00000574070 NPM1P06748 294 aaKnown RBP eCLIP28.28■■■□□ 2.12
CLDN7-207ENST00000574070 FAM69CQ0P6D2 419 aa28.26■■■□□ 2.11
CLDN7-207ENST00000574070 P3H3Q8IVL6 736 aa28.25■■■□□ 2.11
CLDN7-207ENST00000574070 ABCC10Q5T3U5 1492 aa28.25■■■□□ 2.11
CLDN7-207ENST00000574070 MAPKBP1O60336 1514 aa28.21■■■□□ 2.11
CLDN7-207ENST00000574070 ADCY10Q96PN6 1610 aa28.18■■■□□ 2.1
CLDN7-207ENST00000574070 DIP2BQ9P265 1576 aa28.17■■■□□ 2.1
CLDN7-207ENST00000574070 UACAQ9BZF9 1416 aa28.17■■■□□ 2.1
CLDN7-207ENST00000574070 SAMD9Q5K651 1589 aa28.14■■■□□ 2.1
CLDN7-207ENST00000574070 KDM6BO15054 1643 aa28.12■■■□□ 2.09
CLDN7-207ENST00000574070 UHRF1BP1LA0JNW5 1464 aa28.08■■■□□ 2.09
CLDN7-207ENST00000574070 ABCC2Q92887 1545 aa28.08■■■□□ 2.09
CLDN7-207ENST00000574070 TSPOAP1O95153 1857 aa28.08■■■□□ 2.09
CLDN7-207ENST00000574070 FHOD3Q2V2M9 1422 aa28.06■■■□□ 2.08
CLDN7-207ENST00000574070 PLB1Q6P1J6 1458 aa28.06■■■□□ 2.08
CLDN7-207ENST00000574070 EFCAB5A4FU69 1503 aa28.06■■■□□ 2.08
CLDN7-207ENST00000574070 ABCA8O94911 1581 aa27.99■■■□□ 2.07
CLDN7-207ENST00000574070 KDM4FA0A1W2PPD8 638 aa27.99■■■□□ 2.07
CLDN7-207ENST00000574070 KDM5BQ9UGL1 1544 aa27.94■■■□□ 2.06
CLDN7-207ENST00000574070 ARHGAP35Q9NRY4 1499 aa27.94■■■□□ 2.06
CLDN7-207ENST00000574070 ARID3CA6NKF2 412 aa27.93■■■□□ 2.06
CLDN7-207ENST00000574070 ZCCHC11Q5TAX3 1644 aaKnown RBP27.92■■■□□ 2.06
CLDN7-207ENST00000574070 ASXL2Q76L83 1435 aa27.9■■■□□ 2.06
CLDN7-207ENST00000574070 RAPGEF6Q8TEU7 1601 aa27.89■■■□□ 2.06
CLDN7-207ENST00000574070 LOC105371045A0A1W2PR82 267 aa27.86■■■□□ 2.05
CLDN7-207ENST00000574070 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.86■■■□□ 2.05
CLDN7-207ENST00000574070 HNRNPUL2Q1KMD3 747 aaKnown RBP27.86■■■□□ 2.05
CLDN7-207ENST00000574070 CLIP1P30622 1438 aa27.84■■■□□ 2.05
CLDN7-207ENST00000574070 ATP1B4Q9UN42 357 aaPredicted RBP27.83■■■□□ 2.05
CLDN7-207ENST00000574070 FMN1Q68DA7 1419 aa27.83■■■□□ 2.05
CLDN7-207ENST00000574070 ATP10BO94823 1461 aa27.79■■■□□ 2.04
CLDN7-207ENST00000574070 NUP153P49790 1475 aaKnown RBP27.77■■■□□ 2.04
CLDN7-207ENST00000574070 ILDR1Q86SU0 546 aaPredicted RBP27.77■■■□□ 2.04
CLDN7-207ENST00000574070 WDR7Q9Y4E6 1490 aa27.76■■■□□ 2.04
CLDN7-207ENST00000574070 GLI2P10070 1586 aa27.75■■■□□ 2.03
CLDN7-207ENST00000574070 KCNH8Q96L42 1107 aa27.74■■■□□ 2.03
CLDN7-207ENST00000574070 PPRC1Q5VV67 1664 aaKnown RBP27.72■■■□□ 2.03
CLDN7-207ENST00000574070 CEP162Q5TB80 1403 aa27.72■■■□□ 2.03
CLDN7-207ENST00000574070 EPRSP07814 1512 aaKnown RBP27.72■■■□□ 2.03
CLDN7-207ENST00000574070 ADGRL1O94910 1474 aa27.7■■■□□ 2.03
CLDN7-207ENST00000574070 HECW1Q76N89 1606 aa27.69■■■□□ 2.02
CLDN7-207ENST00000574070 PLEKHD1A6NEE1 506 aa27.65■■■□□ 2.02
CLDN7-207ENST00000574070 CDK13Q14004 1512 aaKnown RBP27.62■■■□□ 2.01
CLDN7-207ENST00000574070 TEX14Q8IWB6 1497 aa27.6■■■□□ 2.01
CLDN7-207ENST00000574070 PCF11O94913 1555 aaKnown RBP27.6■■■□□ 2.01
CLDN7-207ENST00000574070 CASKIN1Q8WXD9 1431 aa27.59■■■□□ 2.01
CLDN7-207ENST00000574070 MAP3K4Q9Y6R4 1608 aa27.57■■■□□ 2
CLDN7-207ENST00000574070 CDK11AQ9UQ88 783 aaPredicted RBP27.56■■■□□ 2
CLDN7-207ENST00000574070 FYCO1Q9BQS8 1478 aa27.53■■■□□ 2
CLDN7-207ENST00000574070 COL17A1Q9UMD9 1497 aaPredicted RBP27.52■■■□□ 2
CLDN7-207ENST00000574070 CD109Q6YHK3 1445 aa27.52■■■□□ 2
CLDN7-207ENST00000574070 HECW2Q9P2P5 1572 aa27.52■■■□□ 2
CLDN7-207ENST00000574070 CFAP43Q8NDM7 1665 aa27.51■■□□□ 1.99
CLDN7-207ENST00000574070 CCDC18Q5T9S5 1454 aa27.5■■□□□ 1.99
CLDN7-207ENST00000574070 LRRIQ1Q96JM4 1722 aa27.47■■□□□ 1.99
CLDN7-207ENST00000574070 ABCA9Q8IUA7 1624 aa27.44■■□□□ 1.98
CLDN7-207ENST00000574070 MAGI3Q5TCQ9 1506 aa27.41■■□□□ 1.98
CLDN7-207ENST00000574070 TROQ12816 1431 aaPredicted RBP27.4■■□□□ 1.98
CLDN7-207ENST00000574070 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.37■■□□□ 1.97
CLDN7-207ENST00000574070 VPS8Q8N3P4 1428 aa27.37■■□□□ 1.97
CLDN7-207ENST00000574070 KIF14Q15058 1648 aa27.34■■□□□ 1.97
CLDN7-207ENST00000574070 TTC37Q6PGP7 1564 aa27.33■■□□□ 1.97
CLDN7-207ENST00000574070 MTUS2Q5JR59 1369 aa27.28■■□□□ 1.96
CLDN7-207ENST00000574070 NEO1Q92859 1461 aa27.24■■□□□ 1.95
CLDN7-207ENST00000574070 PHLDB1Q86UU1 1377 aa27.23■■□□□ 1.95
CLDN7-207ENST00000574070 FANCAO15360 1455 aa27.22■■□□□ 1.95
CLDN7-207ENST00000574070 PLCH2O75038 1416 aa27.22■■□□□ 1.95
CLDN7-207ENST00000574070 MYO5CQ9NQX4 1742 aa27.21■■□□□ 1.95
CLDN7-207ENST00000574070 APLP2Q06481 763 aa27.2■■□□□ 1.94
CLDN7-207ENST00000574070 CFAP74Q9C0B2 1584 aa27.19■■□□□ 1.94
CLDN7-207ENST00000574070 AKNAQ7Z591 1439 aa27.17■■□□□ 1.94
CLDN7-207ENST00000574070 EHBP1L1Q8N3D4 1523 aa27.17■■□□□ 1.94
CLDN7-207ENST00000574070 EFCAB2Q5VUJ9 269 aa27.17■■□□□ 1.94
CLDN7-207ENST00000574070 TIAM1Q13009 1591 aa27.17■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms