RNA–Protein interactions for RNA: ENST00000574054.1

CHRNB1-206, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

TSL 2

Gene CHRNB1, Length 583 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-206ENST00000574054 RUSC2Q8N2Y8 1516 aa36.69■■■■□ 3.46
CHRNB1-206ENST00000574054 CUL7Q14999 1698 aa36.62■■■■□ 3.45
CHRNB1-206ENST00000574054 KIAA0586Q9BVV6 1533 aa36.53■■■■□ 3.44
CHRNB1-206ENST00000574054 CARMIL1Q5VZK9 1371 aa36.51■■■■□ 3.43
CHRNB1-206ENST00000574054 NPM1P06748 294 aaKnown RBP eCLIP36.32■■■■□ 3.4
CHRNB1-206ENST00000574054 ADCY10Q96PN6 1610 aa36.26■■■■□ 3.4
CHRNB1-206ENST00000574054 TTBK1Q5TCY1 1321 aaPredicted RBP36.23■■■■□ 3.39
CHRNB1-206ENST00000574054 IQGAP2Q13576 1575 aa36.22■■■■□ 3.39
CHRNB1-206ENST00000574054 KIF13AQ9H1H9 1805 aa36.2■■■■□ 3.39
CHRNB1-206ENST00000574054 PTPRGP23470 1445 aa36.2■■■■□ 3.39
CHRNB1-206ENST00000574054 CARMIL2Q6F5E8 1435 aa36.2■■■■□ 3.39
CHRNB1-206ENST00000574054 RAPGEF2Q9Y4G8 1499 aa36.18■■■■□ 3.38
CHRNB1-206ENST00000574054 MAPKBP1O60336 1514 aa36.16■■■■□ 3.38
CHRNB1-206ENST00000574054 FAM69CQ0P6D2 419 aa36.15■■■■□ 3.38
CHRNB1-206ENST00000574054 TNIKQ9UKE5 1360 aa36.14■■■■□ 3.38
CHRNB1-206ENST00000574054 ABCC10Q5T3U5 1492 aa36.12■■■■□ 3.37
CHRNB1-206ENST00000574054 DIP2BQ9P265 1576 aa36.03■■■■□ 3.36
CHRNB1-206ENST00000574054 DISP1Q96F81 1524 aa36.02■■■■□ 3.36
CHRNB1-206ENST00000574054 UGGT2Q9NYU1 1516 aa35.97■■■■□ 3.35
CHRNB1-206ENST00000574054 ABCC2Q92887 1545 aa35.95■■■■□ 3.35
CHRNB1-206ENST00000574054 AEBP2Q6ZN18 517 aaPredicted RBP35.92■■■■□ 3.34
CHRNB1-206ENST00000574054 UACAQ9BZF9 1416 aa35.91■■■■□ 3.34
CHRNB1-206ENST00000574054 UHRF1BP1LA0JNW5 1464 aa35.88■■■■□ 3.33
CHRNB1-206ENST00000574054 KIAA0556O60303 1618 aa35.87■■■■□ 3.33
CHRNB1-206ENST00000574054 ASXL2Q76L83 1435 aa35.83■■■■□ 3.33
CHRNB1-206ENST00000574054 PRXQ9BXM0 1461 aa35.83■■■■□ 3.33
CHRNB1-206ENST00000574054 CTTNBP2Q8WZ74 1663 aa35.83■■■■□ 3.33
CHRNB1-206ENST00000574054 TSPOAP1O95153 1857 aa35.8■■■■□ 3.32
CHRNB1-206ENST00000574054 PLB1Q6P1J6 1458 aa35.8■■■■□ 3.32
CHRNB1-206ENST00000574054 GOLGA3Q08378 1498 aa35.73■■■■□ 3.31
CHRNB1-206ENST00000574054 KDM5BQ9UGL1 1544 aa35.72■■■■□ 3.31
CHRNB1-206ENST00000574054 KDM6BO15054 1643 aa35.69■■■■□ 3.3
CHRNB1-206ENST00000574054 ZCCHC11Q5TAX3 1644 aaKnown RBP35.66■■■■□ 3.3
CHRNB1-206ENST00000574054 GLI2P10070 1586 aa35.65■■■■□ 3.3
CHRNB1-206ENST00000574054 CSRNP3Q8WYN3 585 aa35.64■■■■□ 3.3
CHRNB1-206ENST00000574054 EPRSP07814 1512 aaKnown RBP35.6■■■■□ 3.29
CHRNB1-206ENST00000574054 PPRC1Q5VV67 1664 aaKnown RBP35.53■■■■□ 3.28
CHRNB1-206ENST00000574054 ABCA8O94911 1581 aa35.52■■■■□ 3.28
CHRNB1-206ENST00000574054 P3H3Q8IVL6 736 aa35.51■■■■□ 3.28
CHRNB1-206ENST00000574054 WDR7Q9Y4E6 1490 aa35.5■■■■□ 3.27
CHRNB1-206ENST00000574054 EEA1Q15075 1411 aa35.49■■■■□ 3.27
CHRNB1-206ENST00000574054 FAM9AQ8IZU1 332 aaPredicted RBP35.46■■■■□ 3.27
CHRNB1-206ENST00000574054 MAP3K4Q9Y6R4 1608 aa35.46■■■■□ 3.27
CHRNB1-206ENST00000574054 TEX14Q8IWB6 1497 aa35.41■■■■□ 3.26
CHRNB1-206ENST00000574054 KCNH8Q96L42 1107 aa35.39■■■■□ 3.26
CHRNB1-206ENST00000574054 ARID3CA6NKF2 412 aa35.38■■■■□ 3.25
CHRNB1-206ENST00000574054 RANGAP1P46060 587 aaPredicted RBP35.35■■■■□ 3.25
CHRNB1-206ENST00000574054 SAMD9Q5K651 1589 aa35.34■■■■□ 3.25
CHRNB1-206ENST00000574054 COL17A1Q9UMD9 1497 aaPredicted RBP35.31■■■■□ 3.24
CHRNB1-206ENST00000574054 CD109Q6YHK3 1445 aa35.29■■■■□ 3.24
CHRNB1-206ENST00000574054 KDM4FA0A1W2PPD8 638 aa35.27■■■■□ 3.24
CHRNB1-206ENST00000574054 ATP10BO94823 1461 aa35.25■■■■□ 3.23
CHRNB1-206ENST00000574054 CFAP43Q8NDM7 1665 aa35.23■■■■□ 3.23
CHRNB1-206ENST00000574054 MAGI3Q5TCQ9 1506 aa35.2■■■■□ 3.23
CHRNB1-206ENST00000574054 RAPGEF6Q8TEU7 1601 aa35.19■■■■□ 3.22
CHRNB1-206ENST00000574054 KIF21BO75037 1637 aa35.18■■■■□ 3.22
CHRNB1-206ENST00000574054 FHOD3Q2V2M9 1422 aa35.18■■■■□ 3.22
CHRNB1-206ENST00000574054 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP35.15■■■■□ 3.22
CHRNB1-206ENST00000574054 HNRNPUL2Q1KMD3 747 aaKnown RBP35.15■■■■□ 3.22
CHRNB1-206ENST00000574054 CHIC1Q5VXU3 224 aa35.14■■■■□ 3.22
CHRNB1-206ENST00000574054 EHMT2Q96KQ7 1210 aa35.12■■■■□ 3.21
CHRNB1-206ENST00000574054 NUP153P49790 1475 aaKnown RBP35.07■■■■□ 3.2
CHRNB1-206ENST00000574054 ADGRL1O94910 1474 aa35.05■■■■□ 3.2
CHRNB1-206ENST00000574054 EFCAB5A4FU69 1503 aa35.04■■■■□ 3.2
CHRNB1-206ENST00000574054 UBTFP17480 764 aaKnown RBP35.02■■■■□ 3.2
CHRNB1-206ENST00000574054 ABCA9Q8IUA7 1624 aa35■■■■□ 3.19
CHRNB1-206ENST00000574054 ARAP3Q8WWN8 1544 aa34.91■■■■□ 3.18
CHRNB1-206ENST00000574054 PLEKHD1A6NEE1 506 aa34.9■■■■□ 3.18
CHRNB1-206ENST00000574054 PHLDB1Q86UU1 1377 aa34.87■■■■□ 3.17
CHRNB1-206ENST00000574054 NEO1Q92859 1461 aa34.83■■■■□ 3.17
CHRNB1-206ENST00000574054 RAPGEF3O95398 923 aa34.79■■■■□ 3.16
CHRNB1-206ENST00000574054 CDK13Q14004 1512 aaKnown RBP34.78■■■■□ 3.16
CHRNB1-206ENST00000574054 ATP1B4Q9UN42 357 aaPredicted RBP34.78■■■■□ 3.16
CHRNB1-206ENST00000574054 ARHGAP35Q9NRY4 1499 aa34.77■■■■□ 3.16
CHRNB1-206ENST00000574054 FMN1Q68DA7 1419 aa34.75■■■■□ 3.15
CHRNB1-206ENST00000574054 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP34.71■■■■□ 3.15
CHRNB1-206ENST00000574054 TTC37Q6PGP7 1564 aa34.68■■■■□ 3.14
CHRNB1-206ENST00000574054 HECW1Q76N89 1606 aa34.68■■■■□ 3.14
CHRNB1-206ENST00000574054 FANCAO15360 1455 aa34.65■■■■□ 3.14
CHRNB1-206ENST00000574054 FRMPD1Q5SYB0 1578 aa34.65■■■■□ 3.14
CHRNB1-206ENST00000574054 AKNAQ7Z591 1439 aa34.64■■■■□ 3.14
CHRNB1-206ENST00000574054 DENND4BO75064 1496 aaPredicted RBP34.62■■■■□ 3.13
CHRNB1-206ENST00000574054 CFAP74Q9C0B2 1584 aa34.61■■■■□ 3.13
CHRNB1-206ENST00000574054 CDK11AQ9UQ88 783 aaPredicted RBP34.58■■■■□ 3.13
CHRNB1-206ENST00000574054 ARID4BQ4LE39 1312 aaPredicted RBP34.54■■■■□ 3.12
CHRNB1-206ENST00000574054 RICTORQ6R327 1708 aa34.51■■■■□ 3.12
CHRNB1-206ENST00000574054 PLCH2O75038 1416 aa34.5■■■■□ 3.11
CHRNB1-206ENST00000574054 HECW2Q9P2P5 1572 aa34.49■■■■□ 3.11
CHRNB1-206ENST00000574054 ARHGEF40Q8TER5 1519 aa34.49■■■■□ 3.11
CHRNB1-206ENST00000574054 TROQ12816 1431 aaPredicted RBP34.46■■■■□ 3.11
CHRNB1-206ENST00000574054 CLIP1P30622 1438 aa34.44■■■■□ 3.1
CHRNB1-206ENST00000574054 KIF14Q15058 1648 aa34.44■■■■□ 3.1
CHRNB1-206ENST00000574054 ADAMTSL3P82987 1691 aa34.43■■■■□ 3.1
CHRNB1-206ENST00000574054 SCAPERQ9BY12 1400 aa34.42■■■■□ 3.1
CHRNB1-206ENST00000574054 MYO5CQ9NQX4 1742 aa34.41■■■■□ 3.1
CHRNB1-206ENST00000574054 ZMYM4Q5VZL5 1548 aa34.4■■■■□ 3.1
CHRNB1-206ENST00000574054 EFCAB2Q5VUJ9 269 aa34.4■■■■□ 3.1
CHRNB1-206ENST00000574054 LRRIQ1Q96JM4 1722 aa34.4■■■■□ 3.1
CHRNB1-206ENST00000574054 PCF11O94913 1555 aaKnown RBP34.4■■■■□ 3.1
CHRNB1-206ENST00000574054 CASKIN1Q8WXD9 1431 aa34.39■■■■□ 3.1
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms