RNA–Protein interactions for RNA: ENST00000574003.1

RPAIN-214, Transcript of RPA interacting protein, humanhuman

TSL 4 BASIC

Gene RPAIN, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-214ENST00000574003 RUSC2Q8N2Y8 1516 aa19.54■□□□□ 0.72
RPAIN-214ENST00000574003 CUL7Q14999 1698 aa19.51■□□□□ 0.71
RPAIN-214ENST00000574003 CARMIL1Q5VZK9 1371 aa19.5■□□□□ 0.71
RPAIN-214ENST00000574003 KIAA0586Q9BVV6 1533 aa19.45■□□□□ 0.7
RPAIN-214ENST00000574003 TTBK1Q5TCY1 1321 aaPredicted RBP19.37■□□□□ 0.69
RPAIN-214ENST00000574003 RAPGEF2Q9Y4G8 1499 aa19.32■□□□□ 0.68
RPAIN-214ENST00000574003 ADCY10Q96PN6 1610 aa19.29■□□□□ 0.68
RPAIN-214ENST00000574003 IQGAP2Q13576 1575 aa19.29■□□□□ 0.68
RPAIN-214ENST00000574003 PTPRGP23470 1445 aa19.25■□□□□ 0.67
RPAIN-214ENST00000574003 NPM1P06748 294 aaKnown RBP eCLIP19.23■□□□□ 0.67
RPAIN-214ENST00000574003 KIF13AQ9H1H9 1805 aa19.23■□□□□ 0.67
RPAIN-214ENST00000574003 TNIKQ9UKE5 1360 aa19.22■□□□□ 0.67
RPAIN-214ENST00000574003 DISP1Q96F81 1524 aa19.22■□□□□ 0.67
RPAIN-214ENST00000574003 CARMIL2Q6F5E8 1435 aa19.22■□□□□ 0.67
RPAIN-214ENST00000574003 PRXQ9BXM0 1461 aa19.19■□□□□ 0.66
RPAIN-214ENST00000574003 FAM69CQ0P6D2 419 aa19.18■□□□□ 0.66
RPAIN-214ENST00000574003 UGGT2Q9NYU1 1516 aa19.18■□□□□ 0.66
RPAIN-214ENST00000574003 MAPKBP1O60336 1514 aa19.15■□□□□ 0.66
RPAIN-214ENST00000574003 ABCC10Q5T3U5 1492 aa19.15■□□□□ 0.66
RPAIN-214ENST00000574003 CTTNBP2Q8WZ74 1663 aa19.14■□□□□ 0.66
RPAIN-214ENST00000574003 KIAA0556O60303 1618 aa19.14■□□□□ 0.65
RPAIN-214ENST00000574003 FAM9AQ8IZU1 332 aaPredicted RBP19.13■□□□□ 0.65
RPAIN-214ENST00000574003 CSRNP3Q8WYN3 585 aa19.12■□□□□ 0.65
RPAIN-214ENST00000574003 DIP2BQ9P265 1576 aa19.11■□□□□ 0.65
RPAIN-214ENST00000574003 UACAQ9BZF9 1416 aa19.1■□□□□ 0.65
RPAIN-214ENST00000574003 ABCC2Q92887 1545 aa19.1■□□□□ 0.65
RPAIN-214ENST00000574003 UHRF1BP1LA0JNW5 1464 aa19.06■□□□□ 0.64
RPAIN-214ENST00000574003 TSPOAP1O95153 1857 aa19.05■□□□□ 0.64
RPAIN-214ENST00000574003 P3H3Q8IVL6 736 aa19.05■□□□□ 0.64
RPAIN-214ENST00000574003 ASXL2Q76L83 1435 aa19.05■□□□□ 0.64
RPAIN-214ENST00000574003 PLB1Q6P1J6 1458 aa19.03■□□□□ 0.64
RPAIN-214ENST00000574003 CHIC1Q5VXU3 224 aa19.02■□□□□ 0.64
RPAIN-214ENST00000574003 GOLGA3Q08378 1498 aa19.01■□□□□ 0.63
RPAIN-214ENST00000574003 RANGAP1P46060 587 aaPredicted RBP19■□□□□ 0.63
RPAIN-214ENST00000574003 ZCCHC11Q5TAX3 1644 aaKnown RBP19■□□□□ 0.63
RPAIN-214ENST00000574003 KDM5BQ9UGL1 1544 aa19■□□□□ 0.63
RPAIN-214ENST00000574003 EHMT2Q96KQ7 1210 aa18.98■□□□□ 0.63
RPAIN-214ENST00000574003 EEA1Q15075 1411 aa18.98■□□□□ 0.63
RPAIN-214ENST00000574003 ARID3CA6NKF2 412 aa18.97■□□□□ 0.63
RPAIN-214ENST00000574003 ABCA8O94911 1581 aa18.96■□□□□ 0.63
RPAIN-214ENST00000574003 EPRSP07814 1512 aaKnown RBP18.92■□□□□ 0.62
RPAIN-214ENST00000574003 GLI2P10070 1586 aa18.91■□□□□ 0.62
RPAIN-214ENST00000574003 PPRC1Q5VV67 1664 aaKnown RBP18.91■□□□□ 0.62
RPAIN-214ENST00000574003 KDM6BO15054 1643 aa18.89■□□□□ 0.62
RPAIN-214ENST00000574003 SAMD9Q5K651 1589 aa18.89■□□□□ 0.61
RPAIN-214ENST00000574003 KCNH8Q96L42 1107 aa18.87■□□□□ 0.61
RPAIN-214ENST00000574003 WDR7Q9Y4E6 1490 aa18.87■□□□□ 0.61
RPAIN-214ENST00000574003 KIF21BO75037 1637 aa18.86■□□□□ 0.61
RPAIN-214ENST00000574003 FHOD3Q2V2M9 1422 aa18.85■□□□□ 0.61
RPAIN-214ENST00000574003 AEBP2Q6ZN18 517 aaPredicted RBP18.84■□□□□ 0.61
RPAIN-214ENST00000574003 MAP3K4Q9Y6R4 1608 aa18.84■□□□□ 0.61
RPAIN-214ENST00000574003 ATP10BO94823 1461 aa18.82■□□□□ 0.6
RPAIN-214ENST00000574003 COL17A1Q9UMD9 1497 aaPredicted RBP18.8■□□□□ 0.6
RPAIN-214ENST00000574003 UBTFP17480 764 aaKnown RBP18.79■□□□□ 0.6
RPAIN-214ENST00000574003 RAPGEF6Q8TEU7 1601 aa18.78■□□□□ 0.6
RPAIN-214ENST00000574003 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.75■□□□□ 0.59
RPAIN-214ENST00000574003 HNRNPUL2Q1KMD3 747 aaKnown RBP18.75■□□□□ 0.59
RPAIN-214ENST00000574003 CD109Q6YHK3 1445 aa18.74■□□□□ 0.59
RPAIN-214ENST00000574003 NUP153P49790 1475 aaKnown RBP18.74■□□□□ 0.59
RPAIN-214ENST00000574003 TEX14Q8IWB6 1497 aa18.72■□□□□ 0.59
RPAIN-214ENST00000574003 CFAP43Q8NDM7 1665 aa18.7■□□□□ 0.58
RPAIN-214ENST00000574003 EFCAB5A4FU69 1503 aa18.69■□□□□ 0.58
RPAIN-214ENST00000574003 MAGI3Q5TCQ9 1506 aa18.69■□□□□ 0.58
RPAIN-214ENST00000574003 KDM4FA0A1W2PPD8 638 aa18.68■□□□□ 0.58
RPAIN-214ENST00000574003 ARHGAP35Q9NRY4 1499 aa18.66■□□□□ 0.58
RPAIN-214ENST00000574003 ATP1B4Q9UN42 357 aaPredicted RBP18.63■□□□□ 0.57
RPAIN-214ENST00000574003 CDK13Q14004 1512 aaKnown RBP18.63■□□□□ 0.57
RPAIN-214ENST00000574003 ABCA9Q8IUA7 1624 aa18.63■□□□□ 0.57
RPAIN-214ENST00000574003 PLEKHD1A6NEE1 506 aa18.6■□□□□ 0.57
RPAIN-214ENST00000574003 ADGRL1O94910 1474 aa18.55■□□□□ 0.56
RPAIN-214ENST00000574003 RAPGEF3O95398 923 aa18.54■□□□□ 0.56
RPAIN-214ENST00000574003 FMN1Q68DA7 1419 aa18.54■□□□□ 0.56
RPAIN-214ENST00000574003 ARAP3Q8WWN8 1544 aa18.53■□□□□ 0.56
RPAIN-214ENST00000574003 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.52■□□□□ 0.56
RPAIN-214ENST00000574003 TTC37Q6PGP7 1564 aa18.51■□□□□ 0.55
RPAIN-214ENST00000574003 HECW1Q76N89 1606 aa18.51■□□□□ 0.55
RPAIN-214ENST00000574003 LRRIQ1Q96JM4 1722 aa18.49■□□□□ 0.55
RPAIN-214ENST00000574003 NEO1Q92859 1461 aa18.48■□□□□ 0.55
RPAIN-214ENST00000574003 FRMPD1Q5SYB0 1578 aa18.46■□□□□ 0.55
RPAIN-214ENST00000574003 PCF11O94913 1555 aaKnown RBP18.45■□□□□ 0.54
RPAIN-214ENST00000574003 PHLDB1Q86UU1 1377 aa18.44■□□□□ 0.54
RPAIN-214ENST00000574003 AKNAQ7Z591 1439 aa18.44■□□□□ 0.54
RPAIN-214ENST00000574003 KIF14Q15058 1648 aa18.44■□□□□ 0.54
RPAIN-214ENST00000574003 FANCAO15360 1455 aa18.44■□□□□ 0.54
RPAIN-214ENST00000574003 CLIP1P30622 1438 aa18.43■□□□□ 0.54
RPAIN-214ENST00000574003 CASKIN1Q8WXD9 1431 aa18.4■□□□□ 0.54
RPAIN-214ENST00000574003 TROQ12816 1431 aaPredicted RBP18.4■□□□□ 0.54
RPAIN-214ENST00000574003 DENND4BO75064 1496 aaPredicted RBP18.39■□□□□ 0.54
RPAIN-214ENST00000574003 CDK11AQ9UQ88 783 aaPredicted RBP18.39■□□□□ 0.53
RPAIN-214ENST00000574003 PLCH2O75038 1416 aa18.39■□□□□ 0.53
RPAIN-214ENST00000574003 RICTORQ6R327 1708 aa18.37■□□□□ 0.53
RPAIN-214ENST00000574003 CFAP74Q9C0B2 1584 aa18.36■□□□□ 0.53
RPAIN-214ENST00000574003 MYO5CQ9NQX4 1742 aa18.35■□□□□ 0.53
RPAIN-214ENST00000574003 SCAPERQ9BY12 1400 aa18.33■□□□□ 0.53
RPAIN-214ENST00000574003 YEATS2Q9ULM3 1422 aa18.32■□□□□ 0.52
RPAIN-214ENST00000574003 ARID4BQ4LE39 1312 aaPredicted RBP18.32■□□□□ 0.52
RPAIN-214ENST00000574003 LOC105371045A0A1W2PR82 267 aa18.32■□□□□ 0.52
RPAIN-214ENST00000574003 EFCAB2Q5VUJ9 269 aa18.32■□□□□ 0.52
RPAIN-214ENST00000574003 CCDC18Q5T9S5 1454 aa18.32■□□□□ 0.52
RPAIN-214ENST00000574003 FYCO1Q9BQS8 1478 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms