RNA–Protein interactions for RNA: ENST00000573990.1

SPNS2-207, Transcript of sphingolipid transporter 2, humanhuman

TSL 3

Gene SPNS2, Length 761 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS2-207ENST00000573990 JPH4Q96JJ6 628 aa33.23■■■□□ 2.91
SPNS2-207ENST00000573990 PRG4Q92954 1404 aaPredicted RBP33.19■■■□□ 2.9
SPNS2-207ENST00000573990 KIAA0586Q9BVV6 1533 aa33.11■■■□□ 2.89
SPNS2-207ENST00000573990 TRHP20396 242 aaPredicted RBP33.09■■■□□ 2.89
SPNS2-207ENST00000573990 RAPGEF2Q9Y4G8 1499 aa32.97■■■□□ 2.87
SPNS2-207ENST00000573990 IQGAP2Q13576 1575 aa32.85■■■□□ 2.85
SPNS2-207ENST00000573990 TTBK1Q5TCY1 1321 aaPredicted RBP32.81■■■□□ 2.84
SPNS2-207ENST00000573990 PRXQ9BXM0 1461 aa32.77■■■□□ 2.84
SPNS2-207ENST00000573990 CARMIL2Q6F5E8 1435 aa32.75■■■□□ 2.83
SPNS2-207ENST00000573990 PTPRGP23470 1445 aa32.73■■■□□ 2.83
SPNS2-207ENST00000573990 CSRNP3Q8WYN3 585 aa32.72■■■□□ 2.83
SPNS2-207ENST00000573990 DISP1Q96F81 1524 aa32.7■■■□□ 2.83
SPNS2-207ENST00000573990 TNIKQ9UKE5 1360 aa32.7■■■□□ 2.82
SPNS2-207ENST00000573990 ADCY10Q96PN6 1610 aa32.69■■■□□ 2.82
SPNS2-207ENST00000573990 UGGT2Q9NYU1 1516 aa32.67■■■□□ 2.82
SPNS2-207ENST00000573990 NPM1P06748 294 aaKnown RBP eCLIP32.66■■■□□ 2.82
SPNS2-207ENST00000573990 CHIC1Q5VXU3 224 aa32.66■■■□□ 2.82
SPNS2-207ENST00000573990 FAM9AQ8IZU1 332 aaPredicted RBP32.66■■■□□ 2.82
SPNS2-207ENST00000573990 CTTNBP2Q8WZ74 1663 aa32.63■■■□□ 2.81
SPNS2-207ENST00000573990 EEA1Q15075 1411 aa32.56■■■□□ 2.8
SPNS2-207ENST00000573990 KIAA0556O60303 1618 aa32.55■■■□□ 2.8
SPNS2-207ENST00000573990 MAPKBP1O60336 1514 aa32.49■■■□□ 2.79
SPNS2-207ENST00000573990 KIF13AQ9H1H9 1805 aa32.49■■■□□ 2.79
SPNS2-207ENST00000573990 UACAQ9BZF9 1416 aa32.48■■■□□ 2.79
SPNS2-207ENST00000573990 FAM69CQ0P6D2 419 aa32.46■■■□□ 2.79
SPNS2-207ENST00000573990 ABCC2Q92887 1545 aa32.44■■■□□ 2.78
SPNS2-207ENST00000573990 ABCC10Q5T3U5 1492 aa32.43■■■□□ 2.78
SPNS2-207ENST00000573990 UHRF1BP1LA0JNW5 1464 aa32.42■■■□□ 2.78
SPNS2-207ENST00000573990 GOLGA3Q08378 1498 aa32.42■■■□□ 2.78
SPNS2-207ENST00000573990 P3H3Q8IVL6 736 aa32.4■■■□□ 2.78
SPNS2-207ENST00000573990 DIP2BQ9P265 1576 aa32.36■■■□□ 2.77
SPNS2-207ENST00000573990 PLB1Q6P1J6 1458 aa32.34■■■□□ 2.77
SPNS2-207ENST00000573990 RANGAP1P46060 587 aaPredicted RBP32.33■■■□□ 2.77
SPNS2-207ENST00000573990 EHMT2Q96KQ7 1210 aa32.33■■■□□ 2.77
SPNS2-207ENST00000573990 ASXL2Q76L83 1435 aa32.31■■■□□ 2.76
SPNS2-207ENST00000573990 KDM5BQ9UGL1 1544 aa32.29■■■□□ 2.76
SPNS2-207ENST00000573990 KIF21BO75037 1637 aa32.29■■■□□ 2.76
SPNS2-207ENST00000573990 ABCA8O94911 1581 aa32.24■■■□□ 2.75
SPNS2-207ENST00000573990 ZCCHC11Q5TAX3 1644 aaKnown RBP32.24■■■□□ 2.75
SPNS2-207ENST00000573990 SAMD9Q5K651 1589 aa32.21■■■□□ 2.75
SPNS2-207ENST00000573990 TSPOAP1O95153 1857 aa32.16■■■□□ 2.74
SPNS2-207ENST00000573990 ARID3CA6NKF2 412 aa32.15■■■□□ 2.74
SPNS2-207ENST00000573990 UBTFP17480 764 aaKnown RBP32.15■■■□□ 2.74
SPNS2-207ENST00000573990 EPRSP07814 1512 aaKnown RBP32.1■■■□□ 2.73
SPNS2-207ENST00000573990 FHOD3Q2V2M9 1422 aa32.1■■■□□ 2.73
SPNS2-207ENST00000573990 GLI2P10070 1586 aa32.1■■■□□ 2.73
SPNS2-207ENST00000573990 WDR7Q9Y4E6 1490 aa32.04■■■□□ 2.72
SPNS2-207ENST00000573990 KCNH8Q96L42 1107 aa32.03■■■□□ 2.72
SPNS2-207ENST00000573990 ATP10BO94823 1461 aa32.02■■■□□ 2.72
SPNS2-207ENST00000573990 RAPGEF6Q8TEU7 1601 aa31.99■■■□□ 2.71
SPNS2-207ENST00000573990 PPRC1Q5VV67 1664 aaKnown RBP31.99■■■□□ 2.71
SPNS2-207ENST00000573990 EFCAB5A4FU69 1503 aa31.96■■■□□ 2.71
SPNS2-207ENST00000573990 MAP3K4Q9Y6R4 1608 aa31.95■■■□□ 2.71
SPNS2-207ENST00000573990 KDM6BO15054 1643 aa31.93■■■□□ 2.7
SPNS2-207ENST00000573990 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.91■■■□□ 2.7
SPNS2-207ENST00000573990 HNRNPUL2Q1KMD3 747 aaKnown RBP31.91■■■□□ 2.7
SPNS2-207ENST00000573990 NUP153P49790 1475 aaKnown RBP31.91■■■□□ 2.7
SPNS2-207ENST00000573990 ARHGAP35Q9NRY4 1499 aa31.85■■■□□ 2.69
SPNS2-207ENST00000573990 CD109Q6YHK3 1445 aa31.83■■■□□ 2.69
SPNS2-207ENST00000573990 TEX14Q8IWB6 1497 aa31.79■■■□□ 2.68
SPNS2-207ENST00000573990 COL17A1Q9UMD9 1497 aaPredicted RBP31.79■■■□□ 2.68
SPNS2-207ENST00000573990 CFAP43Q8NDM7 1665 aa31.78■■■□□ 2.68
SPNS2-207ENST00000573990 ATP1B4Q9UN42 357 aaPredicted RBP31.74■■■□□ 2.67
SPNS2-207ENST00000573990 MAGI3Q5TCQ9 1506 aa31.74■■■□□ 2.67
SPNS2-207ENST00000573990 PLEKHD1A6NEE1 506 aa31.71■■■□□ 2.67
SPNS2-207ENST00000573990 FMN1Q68DA7 1419 aa31.7■■■□□ 2.67
SPNS2-207ENST00000573990 CDK13Q14004 1512 aaKnown RBP31.69■■■□□ 2.66
SPNS2-207ENST00000573990 ABCA9Q8IUA7 1624 aa31.67■■■□□ 2.66
SPNS2-207ENST00000573990 AEBP2Q6ZN18 517 aaPredicted RBP31.64■■■□□ 2.66
SPNS2-207ENST00000573990 HECW1Q76N89 1606 aa31.59■■■□□ 2.65
SPNS2-207ENST00000573990 CLIP1P30622 1438 aa31.55■■■□□ 2.64
SPNS2-207ENST00000573990 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP31.51■■■□□ 2.63
SPNS2-207ENST00000573990 LRRIQ1Q96JM4 1722 aa31.49■■■□□ 2.63
SPNS2-207ENST00000573990 KDM4FA0A1W2PPD8 638 aa31.48■■■□□ 2.63
SPNS2-207ENST00000573990 ARAP3Q8WWN8 1544 aa31.48■■■□□ 2.63
SPNS2-207ENST00000573990 CASKIN1Q8WXD9 1431 aa31.46■■■□□ 2.63
SPNS2-207ENST00000573990 PCF11O94913 1555 aaKnown RBP31.46■■■□□ 2.63
SPNS2-207ENST00000573990 TTC37Q6PGP7 1564 aa31.46■■■□□ 2.63
SPNS2-207ENST00000573990 CDK11AQ9UQ88 783 aaPredicted RBP31.43■■■□□ 2.62
SPNS2-207ENST00000573990 NEO1Q92859 1461 aa31.43■■■□□ 2.62
SPNS2-207ENST00000573990 PHLDB1Q86UU1 1377 aa31.43■■■□□ 2.62
SPNS2-207ENST00000573990 LOC105371045A0A1W2PR82 267 aa31.42■■■□□ 2.62
SPNS2-207ENST00000573990 RAPGEF3O95398 923 aa31.42■■■□□ 2.62
SPNS2-207ENST00000573990 TROQ12816 1431 aaPredicted RBP31.36■■■□□ 2.61
SPNS2-207ENST00000573990 KIF14Q15058 1648 aa31.35■■■□□ 2.61
SPNS2-207ENST00000573990 FANCAO15360 1455 aa31.35■■■□□ 2.61
SPNS2-207ENST00000573990 AKNAQ7Z591 1439 aa31.34■■■□□ 2.61
SPNS2-207ENST00000573990 FYCO1Q9BQS8 1478 aa31.33■■■□□ 2.61
SPNS2-207ENST00000573990 PLCH2O75038 1416 aa31.32■■■□□ 2.6
SPNS2-207ENST00000573990 CEP162Q5TB80 1403 aa31.32■■■□□ 2.6
SPNS2-207ENST00000573990 CCDC18Q5T9S5 1454 aa31.31■■■□□ 2.6
SPNS2-207ENST00000573990 ADGRL1O94910 1474 aa31.29■■■□□ 2.6
SPNS2-207ENST00000573990 FRMPD1Q5SYB0 1578 aa31.29■■■□□ 2.6
SPNS2-207ENST00000573990 CFAP74Q9C0B2 1584 aa31.26■■■□□ 2.59
SPNS2-207ENST00000573990 DENND4BO75064 1496 aaPredicted RBP31.25■■■□□ 2.59
SPNS2-207ENST00000573990 MYO5CQ9NQX4 1742 aa31.22■■■□□ 2.59
SPNS2-207ENST00000573990 EFCAB2Q5VUJ9 269 aa31.21■■■□□ 2.59
SPNS2-207ENST00000573990 RICTORQ6R327 1708 aa31.19■■■□□ 2.58
SPNS2-207ENST00000573990 SCAPERQ9BY12 1400 aa31.18■■■□□ 2.58
SPNS2-207ENST00000573990 ARHGAP5Q13017 1502 aa31.14■■■□□ 2.58
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms