RNA–Protein interactions for RNA: ENST00000573548.1

RNF213-216, Transcript of ring finger protein 213, humanhuman

TSL 2

Gene RNF213, Length 616 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF213-216ENST00000573548 NUP160Q12769 1436 aa21.59■■□□□ 1.05
RNF213-216ENST00000573548 SHROOM2Q13796 1616 aa21.53■■□□□ 1.04
RNF213-216ENST00000573548 UBTFP17480 764 aaKnown RBP21.52■■□□□ 1.04
RNF213-216ENST00000573548 PRXQ9BXM0 1461 aa21.52■■□□□ 1.03
RNF213-216ENST00000573548 RAPGEF2Q9Y4G8 1499 aa21.51■■□□□ 1.03
RNF213-216ENST00000573548 ERCC6L2Q5T890 1561 aa21.49■■□□□ 1.03
RNF213-216ENST00000573548 CUL7Q14999 1698 aa21.49■■□□□ 1.03
RNF213-216ENST00000573548 GOLGA3Q08378 1498 aa21.48■■□□□ 1.03
RNF213-216ENST00000573548 EHMT2Q96KQ7 1210 aa21.48■■□□□ 1.03
RNF213-216ENST00000573548 LOC105371045A0A1W2PR82 267 aa21.47■■□□□ 1.03
RNF213-216ENST00000573548 KIF21BO75037 1637 aa21.45■■□□□ 1.02
RNF213-216ENST00000573548 TRHP20396 242 aaPredicted RBP21.36■■□□□ 1.01
RNF213-216ENST00000573548 TNIKQ9UKE5 1360 aa21.36■■□□□ 1.01
RNF213-216ENST00000573548 PRG4Q92954 1404 aaPredicted RBP21.34■■□□□ 1.01
RNF213-216ENST00000573548 KIAA0586Q9BVV6 1533 aa21.28■■□□□ 1
RNF213-216ENST00000573548 JPH4Q96JJ6 628 aa21.24■□□□□ 0.99
RNF213-216ENST00000573548 IQGAP2Q13576 1575 aa21.19■□□□□ 0.98
RNF213-216ENST00000573548 RANGAP1P46060 587 aaPredicted RBP21.18■□□□□ 0.98
RNF213-216ENST00000573548 ADCY10Q96PN6 1610 aa21.15■□□□□ 0.98
RNF213-216ENST00000573548 CEP162Q5TB80 1403 aa21.13■□□□□ 0.97
RNF213-216ENST00000573548 CLIP1P30622 1438 aa21.12■□□□□ 0.97
RNF213-216ENST00000573548 KIF13AQ9H1H9 1805 aa21.11■□□□□ 0.97
RNF213-216ENST00000573548 CTTNBP2Q8WZ74 1663 aa21.08■□□□□ 0.96
RNF213-216ENST00000573548 MAPKBP1O60336 1514 aa21.08■□□□□ 0.96
RNF213-216ENST00000573548 CARMIL2Q6F5E8 1435 aa21.07■□□□□ 0.96
RNF213-216ENST00000573548 EFCAB5A4FU69 1503 aa21.02■□□□□ 0.96
RNF213-216ENST00000573548 UGGT2Q9NYU1 1516 aa21.01■□□□□ 0.95
RNF213-216ENST00000573548 DIP2BQ9P265 1576 aa21.01■□□□□ 0.95
RNF213-216ENST00000573548 KIAA0556O60303 1618 aa21■□□□□ 0.95
RNF213-216ENST00000573548 DISP1Q96F81 1524 aa21■□□□□ 0.95
RNF213-216ENST00000573548 PTPRGP23470 1445 aa21■□□□□ 0.95
RNF213-216ENST00000573548 P3H3Q8IVL6 736 aa20.99■□□□□ 0.95
RNF213-216ENST00000573548 ABCC10Q5T3U5 1492 aa20.97■□□□□ 0.95
RNF213-216ENST00000573548 NPM1P06748 294 aaKnown RBP eCLIP20.97■□□□□ 0.95
RNF213-216ENST00000573548 ARHGAP35Q9NRY4 1499 aa20.95■□□□□ 0.94
RNF213-216ENST00000573548 ABCC2Q92887 1545 aa20.94■□□□□ 0.94
RNF213-216ENST00000573548 TTBK1Q5TCY1 1321 aaPredicted RBP20.93■□□□□ 0.94
RNF213-216ENST00000573548 FMN1Q68DA7 1419 aa20.91■□□□□ 0.94
RNF213-216ENST00000573548 UHRF1BP1LA0JNW5 1464 aa20.9■□□□□ 0.94
RNF213-216ENST00000573548 AEBP2Q6ZN18 517 aaPredicted RBP20.9■□□□□ 0.94
RNF213-216ENST00000573548 APLP2Q06481 763 aa20.89■□□□□ 0.93
RNF213-216ENST00000573548 SAMD9Q5K651 1589 aa20.89■□□□□ 0.93
RNF213-216ENST00000573548 FHOD3Q2V2M9 1422 aa20.88■□□□□ 0.93
RNF213-216ENST00000573548 UACAQ9BZF9 1416 aa20.87■□□□□ 0.93
RNF213-216ENST00000573548 FAM69CQ0P6D2 419 aa20.86■□□□□ 0.93
RNF213-216ENST00000573548 VPS8Q8N3P4 1428 aa20.86■□□□□ 0.93
RNF213-216ENST00000573548 ZCCHC11Q5TAX3 1644 aaKnown RBP20.83■□□□□ 0.93
RNF213-216ENST00000573548 ATP1B4Q9UN42 357 aaPredicted RBP20.83■□□□□ 0.93
RNF213-216ENST00000573548 TSPOAP1O95153 1857 aa20.83■□□□□ 0.92
RNF213-216ENST00000573548 ASXL2Q76L83 1435 aa20.81■□□□□ 0.92
RNF213-216ENST00000573548 KDM5BQ9UGL1 1544 aa20.81■□□□□ 0.92
RNF213-216ENST00000573548 PLB1Q6P1J6 1458 aa20.81■□□□□ 0.92
RNF213-216ENST00000573548 KDM6BO15054 1643 aa20.77■□□□□ 0.92
RNF213-216ENST00000573548 GLI2P10070 1586 aa20.76■□□□□ 0.91
RNF213-216ENST00000573548 CASKIN1Q8WXD9 1431 aa20.75■□□□□ 0.91
RNF213-216ENST00000573548 ABCA8O94911 1581 aa20.75■□□□□ 0.91
RNF213-216ENST00000573548 PPRC1Q5VV67 1664 aaKnown RBP20.73■□□□□ 0.91
RNF213-216ENST00000573548 FYCO1Q9BQS8 1478 aa20.71■□□□□ 0.91
RNF213-216ENST00000573548 MAP3K4Q9Y6R4 1608 aa20.71■□□□□ 0.91
RNF213-216ENST00000573548 EPRSP07814 1512 aaKnown RBP20.7■□□□□ 0.9
RNF213-216ENST00000573548 WDR7Q9Y4E6 1490 aa20.69■□□□□ 0.9
RNF213-216ENST00000573548 CDK11AQ9UQ88 783 aaPredicted RBP20.68■□□□□ 0.9
RNF213-216ENST00000573548 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.67■□□□□ 0.9
RNF213-216ENST00000573548 HNRNPUL2Q1KMD3 747 aaKnown RBP20.67■□□□□ 0.9
RNF213-216ENST00000573548 CCDC18Q5T9S5 1454 aa20.62■□□□□ 0.89
RNF213-216ENST00000573548 HECW1Q76N89 1606 aa20.62■□□□□ 0.89
RNF213-216ENST00000573548 RAPGEF6Q8TEU7 1601 aa20.6■□□□□ 0.89
RNF213-216ENST00000573548 PCF11O94913 1555 aaKnown RBP20.6■□□□□ 0.89
RNF213-216ENST00000573548 TEX14Q8IWB6 1497 aa20.6■□□□□ 0.89
RNF213-216ENST00000573548 CFAP43Q8NDM7 1665 aa20.6■□□□□ 0.89
RNF213-216ENST00000573548 MAP3K1Q13233 1512 aa20.59■□□□□ 0.89
RNF213-216ENST00000573548 ARID3CA6NKF2 412 aa20.57■□□□□ 0.88
RNF213-216ENST00000573548 PLEKHD1A6NEE1 506 aa20.56■□□□□ 0.88
RNF213-216ENST00000573548 NUP153P49790 1475 aaKnown RBP20.55■□□□□ 0.88
RNF213-216ENST00000573548 MTUS2Q5JR59 1369 aa20.53■□□□□ 0.88
RNF213-216ENST00000573548 TIAM1Q13009 1591 aa20.5■□□□□ 0.87
RNF213-216ENST00000573548 ATP10BO94823 1461 aa20.5■□□□□ 0.87
RNF213-216ENST00000573548 MAGI3Q5TCQ9 1506 aa20.48■□□□□ 0.87
RNF213-216ENST00000573548 PPARGC1BQ86YN6 1023 aaKnown RBP20.48■□□□□ 0.87
RNF213-216ENST00000573548 CD109Q6YHK3 1445 aa20.47■□□□□ 0.87
RNF213-216ENST00000573548 KANK4Q5T7N3 995 aaPredicted RBP20.47■□□□□ 0.87
RNF213-216ENST00000573548 ABCA9Q8IUA7 1624 aa20.46■□□□□ 0.87
RNF213-216ENST00000573548 LRRC9Q6ZRR7 1453 aa20.46■□□□□ 0.87
RNF213-216ENST00000573548 COL17A1Q9UMD9 1497 aaPredicted RBP20.45■□□□□ 0.86
RNF213-216ENST00000573548 CDK13Q14004 1512 aaKnown RBP20.45■□□□□ 0.86
RNF213-216ENST00000573548 KCNH8Q96L42 1107 aa20.44■□□□□ 0.86
RNF213-216ENST00000573548 TROQ12816 1431 aaPredicted RBP20.41■□□□□ 0.86
RNF213-216ENST00000573548 EHBP1L1Q8N3D4 1523 aa20.39■□□□□ 0.85
RNF213-216ENST00000573548 ADGRL1O94910 1474 aa20.32■□□□□ 0.84
RNF213-216ENST00000573548 LRRIQ1Q96JM4 1722 aa20.31■□□□□ 0.84
RNF213-216ENST00000573548 ARAP3Q8WWN8 1544 aa20.31■□□□□ 0.84
RNF213-216ENST00000573548 TRIM26Q12899 539 aaPredicted RBP20.3■□□□□ 0.84
RNF213-216ENST00000573548 CCNB3Q8WWL7 1395 aa20.3■□□□□ 0.84
RNF213-216ENST00000573548 KDM4FA0A1W2PPD8 638 aa20.29■□□□□ 0.84
RNF213-216ENST00000573548 NEO1Q92859 1461 aa20.29■□□□□ 0.84
RNF213-216ENST00000573548 TTC37Q6PGP7 1564 aa20.29■□□□□ 0.84
RNF213-216ENST00000573548 CFAP74Q9C0B2 1584 aa20.29■□□□□ 0.84
RNF213-216ENST00000573548 SUPT6HQ7KZ85 1726 aaKnown RBP20.28■□□□□ 0.84
RNF213-216ENST00000573548 NCOA2Q15596 1464 aa20.28■□□□□ 0.84
RNF213-216ENST00000573548 KIF14Q15058 1648 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms