RNA–Protein interactions for RNA: ENST00000573395.1

RAB40B-208, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40B, Length 517 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-208ENST00000573395 CUL7Q14999 1698 aa28■■■□□ 2.07
RAB40B-208ENST00000573395 RUSC2Q8N2Y8 1516 aa27.97■■■□□ 2.07
RAB40B-208ENST00000573395 CARMIL1Q5VZK9 1371 aa27.92■■■□□ 2.06
RAB40B-208ENST00000573395 KIAA0586Q9BVV6 1533 aa27.9■■■□□ 2.06
RAB40B-208ENST00000573395 NPM1P06748 294 aaKnown RBP eCLIP27.76■■■□□ 2.03
RAB40B-208ENST00000573395 RAPGEF2Q9Y4G8 1499 aa27.7■■■□□ 2.02
RAB40B-208ENST00000573395 CARMIL2Q6F5E8 1435 aa27.69■■■□□ 2.02
RAB40B-208ENST00000573395 TTBK1Q5TCY1 1321 aaPredicted RBP27.67■■■□□ 2.02
RAB40B-208ENST00000573395 IQGAP2Q13576 1575 aa27.67■■■□□ 2.02
RAB40B-208ENST00000573395 PTPRGP23470 1445 aa27.64■■■□□ 2.02
RAB40B-208ENST00000573395 TNIKQ9UKE5 1360 aa27.6■■■□□ 2.01
RAB40B-208ENST00000573395 ADCY10Q96PN6 1610 aa27.59■■■□□ 2.01
RAB40B-208ENST00000573395 FAM69CQ0P6D2 419 aa27.53■■■□□ 2
RAB40B-208ENST00000573395 MAPKBP1O60336 1514 aa27.52■■■□□ 2
RAB40B-208ENST00000573395 ABCC10Q5T3U5 1492 aa27.5■■□□□ 1.99
RAB40B-208ENST00000573395 UGGT2Q9NYU1 1516 aa27.48■■□□□ 1.99
RAB40B-208ENST00000573395 KIF13AQ9H1H9 1805 aa27.48■■□□□ 1.99
RAB40B-208ENST00000573395 DISP1Q96F81 1524 aa27.47■■□□□ 1.99
RAB40B-208ENST00000573395 PRXQ9BXM0 1461 aa27.43■■□□□ 1.98
RAB40B-208ENST00000573395 UACAQ9BZF9 1416 aa27.41■■□□□ 1.98
RAB40B-208ENST00000573395 ABCC2Q92887 1545 aa27.41■■□□□ 1.98
RAB40B-208ENST00000573395 CTTNBP2Q8WZ74 1663 aa27.4■■□□□ 1.98
RAB40B-208ENST00000573395 DIP2BQ9P265 1576 aa27.4■■□□□ 1.98
RAB40B-208ENST00000573395 KIAA0556O60303 1618 aa27.39■■□□□ 1.98
RAB40B-208ENST00000573395 CSRNP3Q8WYN3 585 aa27.37■■□□□ 1.97
RAB40B-208ENST00000573395 UHRF1BP1LA0JNW5 1464 aa27.37■■□□□ 1.97
RAB40B-208ENST00000573395 GOLGA3Q08378 1498 aa27.36■■□□□ 1.97
RAB40B-208ENST00000573395 ASXL2Q76L83 1435 aa27.31■■□□□ 1.96
RAB40B-208ENST00000573395 PLB1Q6P1J6 1458 aa27.31■■□□□ 1.96
RAB40B-208ENST00000573395 EEA1Q15075 1411 aa27.28■■□□□ 1.96
RAB40B-208ENST00000573395 FAM9AQ8IZU1 332 aaPredicted RBP27.28■■□□□ 1.96
RAB40B-208ENST00000573395 AEBP2Q6ZN18 517 aaPredicted RBP27.24■■□□□ 1.95
RAB40B-208ENST00000573395 KDM5BQ9UGL1 1544 aa27.24■■□□□ 1.95
RAB40B-208ENST00000573395 TSPOAP1O95153 1857 aa27.21■■□□□ 1.95
RAB40B-208ENST00000573395 ZCCHC11Q5TAX3 1644 aaKnown RBP27.18■■□□□ 1.94
RAB40B-208ENST00000573395 P3H3Q8IVL6 736 aa27.17■■□□□ 1.94
RAB40B-208ENST00000573395 GLI2P10070 1586 aa27.15■■□□□ 1.94
RAB40B-208ENST00000573395 KDM6BO15054 1643 aa27.15■■□□□ 1.94
RAB40B-208ENST00000573395 EPRSP07814 1512 aaKnown RBP27.12■■□□□ 1.93
RAB40B-208ENST00000573395 ABCA8O94911 1581 aa27.11■■□□□ 1.93
RAB40B-208ENST00000573395 RANGAP1P46060 587 aaPredicted RBP27.1■■□□□ 1.93
RAB40B-208ENST00000573395 WDR7Q9Y4E6 1490 aa27.08■■□□□ 1.93
RAB40B-208ENST00000573395 CHIC1Q5VXU3 224 aa27.05■■□□□ 1.92
RAB40B-208ENST00000573395 KCNH8Q96L42 1107 aa27.03■■□□□ 1.92
RAB40B-208ENST00000573395 ARID3CA6NKF2 412 aa27.02■■□□□ 1.92
RAB40B-208ENST00000573395 SAMD9Q5K651 1589 aa27.01■■□□□ 1.92
RAB40B-208ENST00000573395 TEX14Q8IWB6 1497 aa27■■□□□ 1.91
RAB40B-208ENST00000573395 MAP3K4Q9Y6R4 1608 aa27■■□□□ 1.91
RAB40B-208ENST00000573395 KIF21BO75037 1637 aa26.99■■□□□ 1.91
RAB40B-208ENST00000573395 PPRC1Q5VV67 1664 aaKnown RBP26.98■■□□□ 1.91
RAB40B-208ENST00000573395 EHMT2Q96KQ7 1210 aa26.95■■□□□ 1.9
RAB40B-208ENST00000573395 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.94■■□□□ 1.9
RAB40B-208ENST00000573395 HNRNPUL2Q1KMD3 747 aaKnown RBP26.94■■□□□ 1.9
RAB40B-208ENST00000573395 UBTFP17480 764 aaKnown RBP26.92■■□□□ 1.9
RAB40B-208ENST00000573395 ATP10BO94823 1461 aa26.92■■□□□ 1.9
RAB40B-208ENST00000573395 FHOD3Q2V2M9 1422 aa26.91■■□□□ 1.9
RAB40B-208ENST00000573395 CD109Q6YHK3 1445 aa26.91■■□□□ 1.9
RAB40B-208ENST00000573395 RAPGEF6Q8TEU7 1601 aa26.9■■□□□ 1.9
RAB40B-208ENST00000573395 CFAP43Q8NDM7 1665 aa26.86■■□□□ 1.89
RAB40B-208ENST00000573395 EFCAB5A4FU69 1503 aa26.85■■□□□ 1.89
RAB40B-208ENST00000573395 MAGI3Q5TCQ9 1506 aa26.84■■□□□ 1.89
RAB40B-208ENST00000573395 COL17A1Q9UMD9 1497 aaPredicted RBP26.82■■□□□ 1.88
RAB40B-208ENST00000573395 NUP153P49790 1475 aaKnown RBP26.79■■□□□ 1.88
RAB40B-208ENST00000573395 PLEKHD1A6NEE1 506 aa26.74■■□□□ 1.87
RAB40B-208ENST00000573395 KDM4FA0A1W2PPD8 638 aa26.73■■□□□ 1.87
RAB40B-208ENST00000573395 ABCA9Q8IUA7 1624 aa26.7■■□□□ 1.86
RAB40B-208ENST00000573395 ATP1B4Q9UN42 357 aaPredicted RBP26.69■■□□□ 1.86
RAB40B-208ENST00000573395 FMN1Q68DA7 1419 aa26.65■■□□□ 1.86
RAB40B-208ENST00000573395 PHLDB1Q86UU1 1377 aa26.64■■□□□ 1.86
RAB40B-208ENST00000573395 ARHGAP35Q9NRY4 1499 aa26.62■■□□□ 1.85
RAB40B-208ENST00000573395 ADGRL1O94910 1474 aa26.62■■□□□ 1.85
RAB40B-208ENST00000573395 ARAP3Q8WWN8 1544 aa26.61■■□□□ 1.85
RAB40B-208ENST00000573395 NEO1Q92859 1461 aa26.58■■□□□ 1.85
RAB40B-208ENST00000573395 CDK13Q14004 1512 aaKnown RBP26.58■■□□□ 1.85
RAB40B-208ENST00000573395 HECW1Q76N89 1606 aa26.56■■□□□ 1.84
RAB40B-208ENST00000573395 CDK11AQ9UQ88 783 aaPredicted RBP26.54■■□□□ 1.84
RAB40B-208ENST00000573395 RAPGEF3O95398 923 aa26.52■■□□□ 1.84
RAB40B-208ENST00000573395 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.5■■□□□ 1.83
RAB40B-208ENST00000573395 FANCAO15360 1455 aa26.47■■□□□ 1.83
RAB40B-208ENST00000573395 TTC37Q6PGP7 1564 aa26.45■■□□□ 1.82
RAB40B-208ENST00000573395 CFAP74Q9C0B2 1584 aa26.45■■□□□ 1.82
RAB40B-208ENST00000573395 AKNAQ7Z591 1439 aa26.44■■□□□ 1.82
RAB40B-208ENST00000573395 DENND4BO75064 1496 aaPredicted RBP26.42■■□□□ 1.82
RAB40B-208ENST00000573395 CLIP1P30622 1438 aa26.39■■□□□ 1.82
RAB40B-208ENST00000573395 PLCH2O75038 1416 aa26.37■■□□□ 1.81
RAB40B-208ENST00000573395 TROQ12816 1431 aaPredicted RBP26.37■■□□□ 1.81
RAB40B-208ENST00000573395 CASKIN1Q8WXD9 1431 aa26.36■■□□□ 1.81
RAB40B-208ENST00000573395 FRMPD1Q5SYB0 1578 aa26.36■■□□□ 1.81
RAB40B-208ENST00000573395 ARID4BQ4LE39 1312 aaPredicted RBP26.36■■□□□ 1.81
RAB40B-208ENST00000573395 KIF14Q15058 1648 aa26.35■■□□□ 1.81
RAB40B-208ENST00000573395 EFCAB2Q5VUJ9 269 aa26.34■■□□□ 1.81
RAB40B-208ENST00000573395 PCF11O94913 1555 aaKnown RBP26.33■■□□□ 1.81
RAB40B-208ENST00000573395 CCDC18Q5T9S5 1454 aa26.33■■□□□ 1.81
RAB40B-208ENST00000573395 SCAPERQ9BY12 1400 aa26.3■■□□□ 1.8
RAB40B-208ENST00000573395 RICTORQ6R327 1708 aa26.29■■□□□ 1.8
RAB40B-208ENST00000573395 MYO5CQ9NQX4 1742 aa26.29■■□□□ 1.8
RAB40B-208ENST00000573395 FYCO1Q9BQS8 1478 aa26.27■■□□□ 1.8
RAB40B-208ENST00000573395 LRRIQ1Q96JM4 1722 aa26.27■■□□□ 1.8
RAB40B-208ENST00000573395 ARHGEF40Q8TER5 1519 aa26.26■■□□□ 1.79
RAB40B-208ENST00000573395 ARHGAP5Q13017 1502 aa26.25■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms