RNA–Protein interactions for RNA: ENST00000573203.5

NDE1-207, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 762 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-207ENST00000573203 CLASP1Q7Z460 1538 aa15.69■□□□□ 0.1
NDE1-207ENST00000573203 ADAMTS12P58397 1594 aa15.69■□□□□ 0.1
NDE1-207ENST00000573203 ERICH3Q5RHP9 1530 aa15.68■□□□□ 0.1
NDE1-207ENST00000573203 FHAD1B1AJZ9 1412 aa15.66■□□□□ 0.1
NDE1-207ENST00000573203 GRIN2AQ12879 1464 aa15.65■□□□□ 0.1
NDE1-207ENST00000573203 NCBP3Q53F19 620 aaKnown RBP15.63■□□□□ 0.09
NDE1-207ENST00000573203 CYB5RLQ6IPT4 315 aa15.62■□□□□ 0.09
NDE1-207ENST00000573203 ARAP1Q96P48 1450 aa15.6■□□□□ 0.09
NDE1-207ENST00000573203 KIF27Q86VH2 1401 aa15.6■□□□□ 0.09
NDE1-207ENST00000573203 CEP170Q5SW79 1584 aa15.58■□□□□ 0.09
NDE1-207ENST00000573203 NUP160Q12769 1436 aa15.58■□□□□ 0.08
NDE1-207ENST00000573203 CUL7Q14999 1698 aa15.54■□□□□ 0.08
NDE1-207ENST00000573203 IGF1RP08069 1367 aa15.53■□□□□ 0.08
NDE1-207ENST00000573203 HOXD11P31277 338 aaPredicted RBP15.51■□□□□ 0.07
NDE1-207ENST00000573203 RNF216Q9NWF9 866 aaPredicted RBP15.49■□□□□ 0.07
NDE1-207ENST00000573203 SHROOM2Q13796 1616 aa15.49■□□□□ 0.07
NDE1-207ENST00000573203 ERCC6L2Q5T890 1561 aa15.48■□□□□ 0.07
NDE1-207ENST00000573203 RUSC2Q8N2Y8 1516 aa15.46■□□□□ 0.07
NDE1-207ENST00000573203 CARMIL1Q5VZK9 1371 aa15.46■□□□□ 0.07
NDE1-207ENST00000573203 JPH4Q96JJ6 628 aa15.44■□□□□ 0.06
NDE1-207ENST00000573203 PRG4Q92954 1404 aaPredicted RBP15.43■□□□□ 0.06
NDE1-207ENST00000573203 KIAA0586Q9BVV6 1533 aa15.4■□□□□ 0.06
NDE1-207ENST00000573203 TRHP20396 242 aaPredicted RBP15.38■□□□□ 0.05
NDE1-207ENST00000573203 RAPGEF2Q9Y4G8 1499 aa15.35■□□□□ 0.05
NDE1-207ENST00000573203 IQGAP2Q13576 1575 aa15.32■□□□□ 0.04
NDE1-207ENST00000573203 NPM3O75607 178 aaKnown RBP15.3■□□□□ 0.04
NDE1-207ENST00000573203 KCNA4P22459 653 aa15.29■□□□□ 0.04
NDE1-207ENST00000573203 CARMIL2Q6F5E8 1435 aa15.26■□□□□ 0.03
NDE1-207ENST00000573203 CTTNBP2Q8WZ74 1663 aa15.25■□□□□ 0.03
NDE1-207ENST00000573203 PRXQ9BXM0 1461 aa15.23■□□□□ 0.03
NDE1-207ENST00000573203 TTBK1Q5TCY1 1321 aaPredicted RBP15.22■□□□□ 0.03
NDE1-207ENST00000573203 PTPRGP23470 1445 aa15.22■□□□□ 0.03
NDE1-207ENST00000573203 ADCY10Q96PN6 1610 aa15.21■□□□□ 0.03
NDE1-207ENST00000573203 NPM1P06748 294 aaKnown RBP eCLIP15.21■□□□□ 0.03
NDE1-207ENST00000573203 UGGT2Q9NYU1 1516 aa15.21■□□□□ 0.03
NDE1-207ENST00000573203 TNIKQ9UKE5 1360 aa15.21■□□□□ 0.02
NDE1-207ENST00000573203 EEA1Q15075 1411 aa15.2■□□□□ 0.02
NDE1-207ENST00000573203 CSRNP3Q8WYN3 585 aa15.2■□□□□ 0.02
NDE1-207ENST00000573203 DISP1Q96F81 1524 aa15.2■□□□□ 0.02
NDE1-207ENST00000573203 KIAA0556O60303 1618 aa15.17■□□□□ 0.02
NDE1-207ENST00000573203 FAM9AQ8IZU1 332 aaPredicted RBP15.15■□□□□ 0.02
NDE1-207ENST00000573203 KIF13AQ9H1H9 1805 aa15.14■□□□□ 0.01
NDE1-207ENST00000573203 MAPKBP1O60336 1514 aa15.13■□□□□ 0.01
NDE1-207ENST00000573203 DCAF8L1A6NGE4 600 aa15.13■□□□□ 0.01
NDE1-207ENST00000573203 GOLGA3Q08378 1498 aa15.13■□□□□ 0.01
NDE1-207ENST00000573203 UACAQ9BZF9 1416 aa15.11■□□□□ 0.01
NDE1-207ENST00000573203 ABCC2Q92887 1545 aa15.1■□□□□ 0.01
NDE1-207ENST00000573203 UHRF1BP1LA0JNW5 1464 aa15.09■□□□□ 0.01
NDE1-207ENST00000573203 ABCC10Q5T3U5 1492 aa15.08■□□□□ 0.01
NDE1-207ENST00000573203 FAM69CQ0P6D2 419 aa15.08■□□□□ 0
NDE1-207ENST00000573203 DIP2BQ9P265 1576 aa15.07■□□□□ 0
NDE1-207ENST00000573203 KIF21BO75037 1637 aa15.06■□□□□ 0
NDE1-207ENST00000573203 P3H3Q8IVL6 736 aa15.03■□□□□ -0
NDE1-207ENST00000573203 ZCCHC11Q5TAX3 1644 aaKnown RBP15.03■□□□□ -0
NDE1-207ENST00000573203 KDM5BQ9UGL1 1544 aa15.02■□□□□ -0
NDE1-207ENST00000573203 PLB1Q6P1J6 1458 aa15.02■□□□□ -0
NDE1-207ENST00000573203 ASXL2Q76L83 1435 aa15.02■□□□□ -0
NDE1-207ENST00000573203 TSPOAP1O95153 1857 aa15□□□□□ -0.01
NDE1-207ENST00000573203 SAMD9Q5K651 1589 aa15□□□□□ -0.01
NDE1-207ENST00000573203 RANGAP1P46060 587 aaPredicted RBP15□□□□□ -0.01
NDE1-207ENST00000573203 ABCA8O94911 1581 aa14.99□□□□□ -0.01
NDE1-207ENST00000573203 EHMT2Q96KQ7 1210 aa14.99□□□□□ -0.01
NDE1-207ENST00000573203 UBTFP17480 764 aaKnown RBP14.95□□□□□ -0.02
NDE1-207ENST00000573203 GLI2P10070 1586 aa14.94□□□□□ -0.02
NDE1-207ENST00000573203 EPRSP07814 1512 aaKnown RBP14.93□□□□□ -0.02
NDE1-207ENST00000573203 WDR7Q9Y4E6 1490 aa14.92□□□□□ -0.02
NDE1-207ENST00000573203 RAPGEF6Q8TEU7 1601 aa14.92□□□□□ -0.02
NDE1-207ENST00000573203 EFCAB5A4FU69 1503 aa14.92□□□□□ -0.02
NDE1-207ENST00000573203 FHOD3Q2V2M9 1422 aa14.92□□□□□ -0.02
NDE1-207ENST00000573203 ARID3CA6NKF2 412 aa14.9□□□□□ -0.02
NDE1-207ENST00000573203 KDM6BO15054 1643 aa14.88□□□□□ -0.03
NDE1-207ENST00000573203 MAP3K4Q9Y6R4 1608 aa14.88□□□□□ -0.03
NDE1-207ENST00000573203 PPRC1Q5VV67 1664 aaKnown RBP14.88□□□□□ -0.03
NDE1-207ENST00000573203 ATP10BO94823 1461 aa14.88□□□□□ -0.03
NDE1-207ENST00000573203 KCNH8Q96L42 1107 aa14.87□□□□□ -0.03
NDE1-207ENST00000573203 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.84□□□□□ -0.03
NDE1-207ENST00000573203 HNRNPUL2Q1KMD3 747 aaKnown RBP14.84□□□□□ -0.03
NDE1-207ENST00000573203 CFAP43Q8NDM7 1665 aa14.84□□□□□ -0.03
NDE1-207ENST00000573203 NUP153P49790 1475 aaKnown RBP14.83□□□□□ -0.03
NDE1-207ENST00000573203 TEX14Q8IWB6 1497 aa14.83□□□□□ -0.03
NDE1-207ENST00000573203 CD109Q6YHK3 1445 aa14.81□□□□□ -0.04
NDE1-207ENST00000573203 ARHGAP35Q9NRY4 1499 aa14.81□□□□□ -0.04
NDE1-207ENST00000573203 FMN1Q68DA7 1419 aa14.78□□□□□ -0.04
NDE1-207ENST00000573203 MAGI3Q5TCQ9 1506 aa14.77□□□□□ -0.04
NDE1-207ENST00000573203 RNF39Q9H2S5 420 aa14.77□□□□□ -0.05
NDE1-207ENST00000573203 ATP1B4Q9UN42 357 aaPredicted RBP14.76□□□□□ -0.05
NDE1-207ENST00000573203 ABCA9Q8IUA7 1624 aa14.75□□□□□ -0.05
NDE1-207ENST00000573203 PLEKHD1A6NEE1 506 aa14.75□□□□□ -0.05
NDE1-207ENST00000573203 HECW1Q76N89 1606 aa14.74□□□□□ -0.05
NDE1-207ENST00000573203 CDK13Q14004 1512 aaKnown RBP14.73□□□□□ -0.05
NDE1-207ENST00000573203 COL17A1Q9UMD9 1497 aaPredicted RBP14.73□□□□□ -0.05
NDE1-207ENST00000573203 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.72□□□□□ -0.052e-8■■□□□ 13.1
NDE1-207ENST00000573203 CLIP1P30622 1438 aa14.68□□□□□ -0.06
NDE1-207ENST00000573203 CDK11AQ9UQ88 783 aaPredicted RBP14.66□□□□□ -0.06
NDE1-207ENST00000573203 LRRIQ1Q96JM4 1722 aa14.66□□□□□ -0.06
NDE1-207ENST00000573203 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.66□□□□□ -0.06
NDE1-207ENST00000573203 PCF11O94913 1555 aaKnown RBP14.65□□□□□ -0.06
NDE1-207ENST00000573203 NEO1Q92859 1461 aa14.65□□□□□ -0.06
NDE1-207ENST00000573203 PHLDB1Q86UU1 1377 aa14.65□□□□□ -0.06
NDE1-207ENST00000573203 ARAP3Q8WWN8 1544 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms