RNA–Protein interactions for RNA: ENST00000573153.5

SMG6-212, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-212ENST00000573153 KIAA0586Q9BVV6 1533 aa30.01■■■□□ 2.4
SMG6-212ENST00000573153 JPH4Q96JJ6 628 aa30.01■■■□□ 2.39
SMG6-212ENST00000573153 CARMIL1Q5VZK9 1371 aa30■■■□□ 2.39
SMG6-212ENST00000573153 TRHP20396 242 aaPredicted RBP29.86■■■□□ 2.37
SMG6-212ENST00000573153 RAPGEF2Q9Y4G8 1499 aa29.79■■■□□ 2.36
SMG6-212ENST00000573153 IQGAP2Q13576 1575 aa29.77■■■□□ 2.36
SMG6-212ENST00000573153 ADCY10Q96PN6 1610 aa29.76■■■□□ 2.35
SMG6-212ENST00000573153 DISP1Q96F81 1524 aa29.69■■■□□ 2.34
SMG6-212ENST00000573153 PRXQ9BXM0 1461 aa29.68■■■□□ 2.34
SMG6-212ENST00000573153 UGGT2Q9NYU1 1516 aa29.66■■■□□ 2.34
SMG6-212ENST00000573153 KIF13AQ9H1H9 1805 aa29.64■■■□□ 2.33
SMG6-212ENST00000573153 MAPKBP1O60336 1514 aa29.63■■■□□ 2.33
SMG6-212ENST00000573153 TNIKQ9UKE5 1360 aa29.59■■■□□ 2.33
SMG6-212ENST00000573153 PTPRGP23470 1445 aa29.58■■■□□ 2.33
SMG6-212ENST00000573153 CARMIL2Q6F5E8 1435 aa29.56■■■□□ 2.32
SMG6-212ENST00000573153 CTTNBP2Q8WZ74 1663 aa29.56■■■□□ 2.32
SMG6-212ENST00000573153 KIAA0556O60303 1618 aa29.55■■■□□ 2.32
SMG6-212ENST00000573153 ABCC10Q5T3U5 1492 aa29.53■■■□□ 2.32
SMG6-212ENST00000573153 DIP2BQ9P265 1576 aa29.51■■■□□ 2.31
SMG6-212ENST00000573153 UHRF1BP1LA0JNW5 1464 aa29.48■■■□□ 2.31
SMG6-212ENST00000573153 ABCC2Q92887 1545 aa29.45■■■□□ 2.31
SMG6-212ENST00000573153 UACAQ9BZF9 1416 aa29.42■■■□□ 2.3
SMG6-212ENST00000573153 NPM1P06748 294 aaKnown RBP eCLIP29.37■■■□□ 2.29
SMG6-212ENST00000573153 CSRNP3Q8WYN3 585 aa29.37■■■□□ 2.29
SMG6-212ENST00000573153 TTBK1Q5TCY1 1321 aaPredicted RBP29.36■■■□□ 2.29
SMG6-212ENST00000573153 EEA1Q15075 1411 aa29.36■■■□□ 2.29
SMG6-212ENST00000573153 KDM5BQ9UGL1 1544 aa29.35■■■□□ 2.29
SMG6-212ENST00000573153 FAM69CQ0P6D2 419 aa29.33■■■□□ 2.29
SMG6-212ENST00000573153 GOLGA3Q08378 1498 aa29.3■■■□□ 2.28
SMG6-212ENST00000573153 ASXL2Q76L83 1435 aa29.29■■■□□ 2.28
SMG6-212ENST00000573153 ABCA8O94911 1581 aa29.29■■■□□ 2.28
SMG6-212ENST00000573153 PLB1Q6P1J6 1458 aa29.29■■■□□ 2.28
SMG6-212ENST00000573153 ZCCHC11Q5TAX3 1644 aaKnown RBP29.27■■■□□ 2.28
SMG6-212ENST00000573153 SAMD9Q5K651 1589 aa29.25■■■□□ 2.27
SMG6-212ENST00000573153 GLI2P10070 1586 aa29.24■■■□□ 2.27
SMG6-212ENST00000573153 CHIC1Q5VXU3 224 aa29.22■■■□□ 2.27
SMG6-212ENST00000573153 PPRC1Q5VV67 1664 aaKnown RBP29.21■■■□□ 2.27
SMG6-212ENST00000573153 KIF21BO75037 1637 aa29.19■■■□□ 2.26
SMG6-212ENST00000573153 EPRSP07814 1512 aaKnown RBP29.16■■■□□ 2.26
SMG6-212ENST00000573153 TSPOAP1O95153 1857 aa29.13■■■□□ 2.25
SMG6-212ENST00000573153 MAP3K4Q9Y6R4 1608 aa29.11■■■□□ 2.25
SMG6-212ENST00000573153 FAM9AQ8IZU1 332 aaPredicted RBP29.1■■■□□ 2.25
SMG6-212ENST00000573153 WDR7Q9Y4E6 1490 aa29.08■■■□□ 2.25
SMG6-212ENST00000573153 KDM6BO15054 1643 aa29.05■■■□□ 2.24
SMG6-212ENST00000573153 P3H3Q8IVL6 736 aa29.03■■■□□ 2.24
SMG6-212ENST00000573153 ATP10BO94823 1461 aa28.99■■■□□ 2.23
SMG6-212ENST00000573153 RAPGEF6Q8TEU7 1601 aa28.97■■■□□ 2.23
SMG6-212ENST00000573153 FHOD3Q2V2M9 1422 aa28.96■■■□□ 2.23
SMG6-212ENST00000573153 COL17A1Q9UMD9 1497 aaPredicted RBP28.96■■■□□ 2.23
SMG6-212ENST00000573153 EFCAB5A4FU69 1503 aa28.93■■■□□ 2.22
SMG6-212ENST00000573153 NUP153P49790 1475 aaKnown RBP28.92■■■□□ 2.22
SMG6-212ENST00000573153 CFAP43Q8NDM7 1665 aa28.89■■■□□ 2.21
SMG6-212ENST00000573153 MAGI3Q5TCQ9 1506 aa28.86■■■□□ 2.21
SMG6-212ENST00000573153 TEX14Q8IWB6 1497 aa28.84■■■□□ 2.21
SMG6-212ENST00000573153 ARID3CA6NKF2 412 aa28.83■■■□□ 2.21
SMG6-212ENST00000573153 RANGAP1P46060 587 aaPredicted RBP28.81■■■□□ 2.2
SMG6-212ENST00000573153 ARHGAP35Q9NRY4 1499 aa28.79■■■□□ 2.2
SMG6-212ENST00000573153 CD109Q6YHK3 1445 aa28.79■■■□□ 2.2
SMG6-212ENST00000573153 ABCA9Q8IUA7 1624 aa28.78■■■□□ 2.2
SMG6-212ENST00000573153 KCNH8Q96L42 1107 aa28.76■■■□□ 2.19
SMG6-212ENST00000573153 EHMT2Q96KQ7 1210 aa28.72■■■□□ 2.19
SMG6-212ENST00000573153 UBTFP17480 764 aaKnown RBP28.69■■■□□ 2.18
SMG6-212ENST00000573153 CDK13Q14004 1512 aaKnown RBP28.64■■■□□ 2.18
SMG6-212ENST00000573153 KDM4FA0A1W2PPD8 638 aa28.64■■■□□ 2.18
SMG6-212ENST00000573153 ARAP3Q8WWN8 1544 aa28.62■■■□□ 2.17
SMG6-212ENST00000573153 AEBP2Q6ZN18 517 aaPredicted RBP28.59■■■□□ 2.17
SMG6-212ENST00000573153 FMN1Q68DA7 1419 aa28.59■■■□□ 2.17
SMG6-212ENST00000573153 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.57■■■□□ 2.16
SMG6-212ENST00000573153 HECW1Q76N89 1606 aa28.57■■■□□ 2.16
SMG6-212ENST00000573153 LRRIQ1Q96JM4 1722 aa28.55■■■□□ 2.16
SMG6-212ENST00000573153 TTC37Q6PGP7 1564 aa28.55■■■□□ 2.16
SMG6-212ENST00000573153 NEO1Q92859 1461 aa28.53■■■□□ 2.16
SMG6-212ENST00000573153 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.53■■■□□ 2.16
SMG6-212ENST00000573153 HNRNPUL2Q1KMD3 747 aaKnown RBP28.53■■■□□ 2.16
SMG6-212ENST00000573153 FRMPD1Q5SYB0 1578 aa28.53■■■□□ 2.16
SMG6-212ENST00000573153 ADGRL1O94910 1474 aa28.49■■■□□ 2.15
SMG6-212ENST00000573153 PLEKHD1A6NEE1 506 aa28.49■■■□□ 2.15
SMG6-212ENST00000573153 PHLDB1Q86UU1 1377 aa28.49■■■□□ 2.15
SMG6-212ENST00000573153 PCF11O94913 1555 aaKnown RBP28.45■■■□□ 2.15
SMG6-212ENST00000573153 KIF14Q15058 1648 aa28.4■■■□□ 2.14
SMG6-212ENST00000573153 CASKIN1Q8WXD9 1431 aa28.4■■■□□ 2.14
SMG6-212ENST00000573153 FANCAO15360 1455 aa28.38■■■□□ 2.13
SMG6-212ENST00000573153 RICTORQ6R327 1708 aa28.38■■■□□ 2.13
SMG6-212ENST00000573153 RAPGEF3O95398 923 aa28.36■■■□□ 2.13
SMG6-212ENST00000573153 CLIP1P30622 1438 aa28.35■■■□□ 2.13
SMG6-212ENST00000573153 TROQ12816 1431 aaPredicted RBP28.35■■■□□ 2.13
SMG6-212ENST00000573153 AKNAQ7Z591 1439 aa28.35■■■□□ 2.13
SMG6-212ENST00000573153 CFAP74Q9C0B2 1584 aa28.35■■■□□ 2.13
SMG6-212ENST00000573153 PLCH2O75038 1416 aa28.35■■■□□ 2.13
SMG6-212ENST00000573153 FYCO1Q9BQS8 1478 aa28.3■■■□□ 2.12
SMG6-212ENST00000573153 DENND4BO75064 1496 aaPredicted RBP28.29■■■□□ 2.12
SMG6-212ENST00000573153 ZMYM4Q5VZL5 1548 aa28.28■■■□□ 2.12
SMG6-212ENST00000573153 ATP1B4Q9UN42 357 aaPredicted RBP28.28■■■□□ 2.12
SMG6-212ENST00000573153 CCDC18Q5T9S5 1454 aa28.27■■■□□ 2.12
SMG6-212ENST00000573153 MYO5CQ9NQX4 1742 aa28.27■■■□□ 2.12
SMG6-212ENST00000573153 ARHGEF40Q8TER5 1519 aa28.27■■■□□ 2.12
SMG6-212ENST00000573153 CDK11AQ9UQ88 783 aaPredicted RBP28.21■■■□□ 2.11
SMG6-212ENST00000573153 SIGLEC1Q9BZZ2 1709 aa28.21■■■□□ 2.11
SMG6-212ENST00000573153 POGZQ7Z3K3 1410 aa28.2■■■□□ 2.11
SMG6-212ENST00000573153 ADAMTSL3P82987 1691 aa28.19■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 157.2 ms