RNA–Protein interactions for RNA: ENST00000573106.1

SPNS2-206, Transcript of sphingolipid transporter 2, humanhuman

TSL 3

Gene SPNS2, Length 828 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS2-206ENST00000573106 RUSC2Q8N2Y8 1516 aa27.1■■□□□ 1.93
SPNS2-206ENST00000573106 KIAA0586Q9BVV6 1533 aa27■■□□□ 1.91
SPNS2-206ENST00000573106 CARMIL1Q5VZK9 1371 aa26.98■■□□□ 1.91
SPNS2-206ENST00000573106 CUL7Q14999 1698 aa26.98■■□□□ 1.91
SPNS2-206ENST00000573106 NPM1P06748 294 aaKnown RBP eCLIP26.82■■□□□ 1.88
SPNS2-206ENST00000573106 TTBK1Q5TCY1 1321 aaPredicted RBP26.81■■□□□ 1.88
SPNS2-206ENST00000573106 ADCY10Q96PN6 1610 aa26.79■■□□□ 1.88
SPNS2-206ENST00000573106 PTPRGP23470 1445 aa26.76■■□□□ 1.87
SPNS2-206ENST00000573106 FAM69CQ0P6D2 419 aa26.76■■□□□ 1.87
SPNS2-206ENST00000573106 ABCC10Q5T3U5 1492 aa26.73■■□□□ 1.87
SPNS2-206ENST00000573106 MAPKBP1O60336 1514 aa26.72■■□□□ 1.87
SPNS2-206ENST00000573106 RAPGEF2Q9Y4G8 1499 aa26.72■■□□□ 1.87
SPNS2-206ENST00000573106 CARMIL2Q6F5E8 1435 aa26.72■■□□□ 1.87
SPNS2-206ENST00000573106 TNIKQ9UKE5 1360 aa26.71■■□□□ 1.87
SPNS2-206ENST00000573106 IQGAP2Q13576 1575 aa26.71■■□□□ 1.87
SPNS2-206ENST00000573106 KIF13AQ9H1H9 1805 aa26.69■■□□□ 1.86
SPNS2-206ENST00000573106 DISP1Q96F81 1524 aa26.65■■□□□ 1.86
SPNS2-206ENST00000573106 DIP2BQ9P265 1576 aa26.63■■□□□ 1.85
SPNS2-206ENST00000573106 ABCC2Q92887 1545 aa26.57■■□□□ 1.84
SPNS2-206ENST00000573106 UGGT2Q9NYU1 1516 aa26.57■■□□□ 1.84
SPNS2-206ENST00000573106 AEBP2Q6ZN18 517 aaPredicted RBP26.56■■□□□ 1.84
SPNS2-206ENST00000573106 UACAQ9BZF9 1416 aa26.55■■□□□ 1.84
SPNS2-206ENST00000573106 UHRF1BP1LA0JNW5 1464 aa26.52■■□□□ 1.84
SPNS2-206ENST00000573106 ASXL2Q76L83 1435 aa26.5■■□□□ 1.83
SPNS2-206ENST00000573106 PRXQ9BXM0 1461 aa26.49■■□□□ 1.83
SPNS2-206ENST00000573106 KIAA0556O60303 1618 aa26.48■■□□□ 1.83
SPNS2-206ENST00000573106 PLB1Q6P1J6 1458 aa26.45■■□□□ 1.82
SPNS2-206ENST00000573106 KDM5BQ9UGL1 1544 aa26.4■■□□□ 1.82
SPNS2-206ENST00000573106 KDM6BO15054 1643 aa26.36■■□□□ 1.81
SPNS2-206ENST00000573106 GOLGA3Q08378 1498 aa26.35■■□□□ 1.81
SPNS2-206ENST00000573106 CTTNBP2Q8WZ74 1663 aa26.34■■□□□ 1.81
SPNS2-206ENST00000573106 TSPOAP1O95153 1857 aa26.34■■□□□ 1.81
SPNS2-206ENST00000573106 GLI2P10070 1586 aa26.33■■□□□ 1.81
SPNS2-206ENST00000573106 CSRNP3Q8WYN3 585 aa26.33■■□□□ 1.81
SPNS2-206ENST00000573106 EPRSP07814 1512 aaKnown RBP26.33■■□□□ 1.81
SPNS2-206ENST00000573106 ZCCHC11Q5TAX3 1644 aaKnown RBP26.31■■□□□ 1.8
SPNS2-206ENST00000573106 P3H3Q8IVL6 736 aa26.27■■□□□ 1.8
SPNS2-206ENST00000573106 ABCA8O94911 1581 aa26.24■■□□□ 1.79
SPNS2-206ENST00000573106 PPRC1Q5VV67 1664 aaKnown RBP26.24■■□□□ 1.79
SPNS2-206ENST00000573106 WDR7Q9Y4E6 1490 aa26.23■■□□□ 1.79
SPNS2-206ENST00000573106 FAM9AQ8IZU1 332 aaPredicted RBP26.21■■□□□ 1.79
SPNS2-206ENST00000573106 ARID3CA6NKF2 412 aa26.2■■□□□ 1.78
SPNS2-206ENST00000573106 COL17A1Q9UMD9 1497 aaPredicted RBP26.18■■□□□ 1.78
SPNS2-206ENST00000573106 MAP3K4Q9Y6R4 1608 aa26.17■■□□□ 1.78
SPNS2-206ENST00000573106 KCNH8Q96L42 1107 aa26.17■■□□□ 1.78
SPNS2-206ENST00000573106 EEA1Q15075 1411 aa26.16■■□□□ 1.78
SPNS2-206ENST00000573106 KDM4FA0A1W2PPD8 638 aa26.16■■□□□ 1.78
SPNS2-206ENST00000573106 TEX14Q8IWB6 1497 aa26.13■■□□□ 1.77
SPNS2-206ENST00000573106 RANGAP1P46060 587 aaPredicted RBP26.13■■□□□ 1.77
SPNS2-206ENST00000573106 CD109Q6YHK3 1445 aa26.08■■□□□ 1.77
SPNS2-206ENST00000573106 SAMD9Q5K651 1589 aa26.07■■□□□ 1.76
SPNS2-206ENST00000573106 ATP10BO94823 1461 aa26.07■■□□□ 1.76
SPNS2-206ENST00000573106 MAGI3Q5TCQ9 1506 aa26.03■■□□□ 1.76
SPNS2-206ENST00000573106 FHOD3Q2V2M9 1422 aa26.01■■□□□ 1.75
SPNS2-206ENST00000573106 CHIC1Q5VXU3 224 aa25.97■■□□□ 1.75
SPNS2-206ENST00000573106 EHMT2Q96KQ7 1210 aa25.97■■□□□ 1.75
SPNS2-206ENST00000573106 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.96■■□□□ 1.75
SPNS2-206ENST00000573106 HNRNPUL2Q1KMD3 747 aaKnown RBP25.96■■□□□ 1.75
SPNS2-206ENST00000573106 CFAP43Q8NDM7 1665 aa25.95■■□□□ 1.74
SPNS2-206ENST00000573106 RAPGEF6Q8TEU7 1601 aa25.95■■□□□ 1.74
SPNS2-206ENST00000573106 ADGRL1O94910 1474 aa25.93■■□□□ 1.74
SPNS2-206ENST00000573106 NUP153P49790 1475 aaKnown RBP25.93■■□□□ 1.74
SPNS2-206ENST00000573106 KIF21BO75037 1637 aa25.92■■□□□ 1.74
SPNS2-206ENST00000573106 UBTFP17480 764 aaKnown RBP25.85■■□□□ 1.73
SPNS2-206ENST00000573106 EFCAB5A4FU69 1503 aa25.83■■□□□ 1.73
SPNS2-206ENST00000573106 ABCA9Q8IUA7 1624 aa25.83■■□□□ 1.73
SPNS2-206ENST00000573106 ARAP3Q8WWN8 1544 aa25.8■■□□□ 1.72
SPNS2-206ENST00000573106 PLEKHD1A6NEE1 506 aa25.78■■□□□ 1.72
SPNS2-206ENST00000573106 RAPGEF3O95398 923 aa25.76■■□□□ 1.71
SPNS2-206ENST00000573106 PHLDB1Q86UU1 1377 aa25.74■■□□□ 1.71
SPNS2-206ENST00000573106 NEO1Q92859 1461 aa25.72■■□□□ 1.71
SPNS2-206ENST00000573106 CDK13Q14004 1512 aaKnown RBP25.71■■□□□ 1.71
SPNS2-206ENST00000573106 ARHGAP35Q9NRY4 1499 aa25.7■■□□□ 1.7
SPNS2-206ENST00000573106 ATP1B4Q9UN42 357 aaPredicted RBP25.69■■□□□ 1.7
SPNS2-206ENST00000573106 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.64■■□□□ 1.7
SPNS2-206ENST00000573106 FMN1Q68DA7 1419 aa25.63■■□□□ 1.69
SPNS2-206ENST00000573106 FRMPD1Q5SYB0 1578 aa25.62■■□□□ 1.69
SPNS2-206ENST00000573106 TTC37Q6PGP7 1564 aa25.61■■□□□ 1.69
SPNS2-206ENST00000573106 FANCAO15360 1455 aa25.6■■□□□ 1.69
SPNS2-206ENST00000573106 AKNAQ7Z591 1439 aa25.6■■□□□ 1.69
SPNS2-206ENST00000573106 DENND4BO75064 1496 aaPredicted RBP25.58■■□□□ 1.69
SPNS2-206ENST00000573106 HECW1Q76N89 1606 aa25.55■■□□□ 1.68
SPNS2-206ENST00000573106 ARID4BQ4LE39 1312 aaPredicted RBP25.52■■□□□ 1.68
SPNS2-206ENST00000573106 PLCH2O75038 1416 aa25.51■■□□□ 1.67
SPNS2-206ENST00000573106 HECW2Q9P2P5 1572 aa25.51■■□□□ 1.67
SPNS2-206ENST00000573106 CDK11AQ9UQ88 783 aaPredicted RBP25.5■■□□□ 1.67
SPNS2-206ENST00000573106 CFAP74Q9C0B2 1584 aa25.48■■□□□ 1.67
SPNS2-206ENST00000573106 ARHGEF40Q8TER5 1519 aa25.46■■□□□ 1.67
SPNS2-206ENST00000573106 TROQ12816 1431 aaPredicted RBP25.46■■□□□ 1.67
SPNS2-206ENST00000573106 RICTORQ6R327 1708 aa25.45■■□□□ 1.66
SPNS2-206ENST00000573106 SCAPERQ9BY12 1400 aa25.45■■□□□ 1.66
SPNS2-206ENST00000573106 YEATS2Q9ULM3 1422 aa25.45■■□□□ 1.66
SPNS2-206ENST00000573106 PTPRMP28827 1452 aa25.44■■□□□ 1.66
SPNS2-206ENST00000573106 ADAMTSL3P82987 1691 aa25.42■■□□□ 1.66
SPNS2-206ENST00000573106 KIF14Q15058 1648 aa25.42■■□□□ 1.66
SPNS2-206ENST00000573106 EFCAB2Q5VUJ9 269 aa25.42■■□□□ 1.66
SPNS2-206ENST00000573106 POGZQ7Z3K3 1410 aa25.41■■□□□ 1.66
SPNS2-206ENST00000573106 ZMYM4Q5VZL5 1548 aa25.41■■□□□ 1.66
SPNS2-206ENST00000573106 CLIP1P30622 1438 aa25.39■■□□□ 1.66
SPNS2-206ENST00000573106 CASKIN1Q8WXD9 1431 aa25.39■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms