RNA–Protein interactions for RNA: ENST00000572857.5

CHRNB1-204, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

TSL 4

Gene CHRNB1, Length 539 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-204ENST00000572857 CARMIL1Q5VZK9 1371 aa35.72■■■■□ 3.31
CHRNB1-204ENST00000572857 CUL7Q14999 1698 aa35.69■■■■□ 3.3
CHRNB1-204ENST00000572857 RUSC2Q8N2Y8 1516 aa35.69■■■■□ 3.3
CHRNB1-204ENST00000572857 KIAA0586Q9BVV6 1533 aa35.64■■■■□ 3.3
CHRNB1-204ENST00000572857 NPM1P06748 294 aaKnown RBP eCLIP35.41■■■■□ 3.26
CHRNB1-204ENST00000572857 TTBK1Q5TCY1 1321 aaPredicted RBP35.4■■■■□ 3.26
CHRNB1-204ENST00000572857 RAPGEF2Q9Y4G8 1499 aa35.38■■■■□ 3.25
CHRNB1-204ENST00000572857 PTPRGP23470 1445 aa35.32■■■■□ 3.25
CHRNB1-204ENST00000572857 CARMIL2Q6F5E8 1435 aa35.32■■■■□ 3.24
CHRNB1-204ENST00000572857 IQGAP2Q13576 1575 aa35.3■■■■□ 3.24
CHRNB1-204ENST00000572857 TNIKQ9UKE5 1360 aa35.25■■■■□ 3.23
CHRNB1-204ENST00000572857 ADCY10Q96PN6 1610 aa35.24■■■■□ 3.23
CHRNB1-204ENST00000572857 FAM69CQ0P6D2 419 aa35.2■■■■□ 3.23
CHRNB1-204ENST00000572857 DISP1Q96F81 1524 aa35.14■■■■□ 3.22
CHRNB1-204ENST00000572857 MAPKBP1O60336 1514 aa35.12■■■■□ 3.21
CHRNB1-204ENST00000572857 ABCC10Q5T3U5 1492 aa35.11■■■■□ 3.21
CHRNB1-204ENST00000572857 UGGT2Q9NYU1 1516 aa35.1■■■■□ 3.21
CHRNB1-204ENST00000572857 PRXQ9BXM0 1461 aa35.09■■■■□ 3.21
CHRNB1-204ENST00000572857 KIF13AQ9H1H9 1805 aa35.06■■■■□ 3.2
CHRNB1-204ENST00000572857 CSRNP3Q8WYN3 585 aa35.02■■■■□ 3.2
CHRNB1-204ENST00000572857 UACAQ9BZF9 1416 aa35.02■■■■□ 3.2
CHRNB1-204ENST00000572857 ABCC2Q92887 1545 aa35.01■■■■□ 3.19
CHRNB1-204ENST00000572857 DIP2BQ9P265 1576 aa34.97■■■■□ 3.19
CHRNB1-204ENST00000572857 KIAA0556O60303 1618 aa34.96■■■■□ 3.19
CHRNB1-204ENST00000572857 UHRF1BP1LA0JNW5 1464 aa34.96■■■■□ 3.19
CHRNB1-204ENST00000572857 CTTNBP2Q8WZ74 1663 aa34.92■■■■□ 3.18
CHRNB1-204ENST00000572857 ASXL2Q76L83 1435 aa34.89■■■■□ 3.18
CHRNB1-204ENST00000572857 FAM9AQ8IZU1 332 aaPredicted RBP34.89■■■■□ 3.18
CHRNB1-204ENST00000572857 GOLGA3Q08378 1498 aa34.89■■■■□ 3.18
CHRNB1-204ENST00000572857 PLB1Q6P1J6 1458 aa34.84■■■■□ 3.17
CHRNB1-204ENST00000572857 EEA1Q15075 1411 aa34.81■■■■□ 3.16
CHRNB1-204ENST00000572857 KDM5BQ9UGL1 1544 aa34.81■■■■□ 3.16
CHRNB1-204ENST00000572857 P3H3Q8IVL6 736 aa34.8■■■■□ 3.16
CHRNB1-204ENST00000572857 AEBP2Q6ZN18 517 aaPredicted RBP34.73■■■■□ 3.15
CHRNB1-204ENST00000572857 TSPOAP1O95153 1857 aa34.71■■■■□ 3.15
CHRNB1-204ENST00000572857 RANGAP1P46060 587 aaPredicted RBP34.69■■■■□ 3.14
CHRNB1-204ENST00000572857 CHIC1Q5VXU3 224 aa34.69■■■■□ 3.14
CHRNB1-204ENST00000572857 ZCCHC11Q5TAX3 1644 aaKnown RBP34.69■■■■□ 3.14
CHRNB1-204ENST00000572857 EPRSP07814 1512 aaKnown RBP34.65■■■■□ 3.14
CHRNB1-204ENST00000572857 GLI2P10070 1586 aa34.65■■■■□ 3.14
CHRNB1-204ENST00000572857 ABCA8O94911 1581 aa34.64■■■■□ 3.14
CHRNB1-204ENST00000572857 ARID3CA6NKF2 412 aa34.61■■■■□ 3.13
CHRNB1-204ENST00000572857 KDM6BO15054 1643 aa34.6■■■■□ 3.13
CHRNB1-204ENST00000572857 KCNH8Q96L42 1107 aa34.58■■■■□ 3.13
CHRNB1-204ENST00000572857 WDR7Q9Y4E6 1490 aa34.58■■■■□ 3.13
CHRNB1-204ENST00000572857 EHMT2Q96KQ7 1210 aa34.55■■■■□ 3.12
CHRNB1-204ENST00000572857 SAMD9Q5K651 1589 aa34.49■■■■□ 3.11
CHRNB1-204ENST00000572857 PPRC1Q5VV67 1664 aaKnown RBP34.47■■■■□ 3.11
CHRNB1-204ENST00000572857 KIF21BO75037 1637 aa34.44■■■■□ 3.1
CHRNB1-204ENST00000572857 MAP3K4Q9Y6R4 1608 aa34.44■■■■□ 3.1
CHRNB1-204ENST00000572857 UBTFP17480 764 aaKnown RBP34.43■■■■□ 3.1
CHRNB1-204ENST00000572857 ATP10BO94823 1461 aa34.43■■■■□ 3.1
CHRNB1-204ENST00000572857 FHOD3Q2V2M9 1422 aa34.42■■■■□ 3.1
CHRNB1-204ENST00000572857 TEX14Q8IWB6 1497 aa34.41■■■■□ 3.1
CHRNB1-204ENST00000572857 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP34.4■■■■□ 3.1
CHRNB1-204ENST00000572857 HNRNPUL2Q1KMD3 747 aaKnown RBP34.4■■■■□ 3.1
CHRNB1-204ENST00000572857 CD109Q6YHK3 1445 aa34.38■■■■□ 3.09
CHRNB1-204ENST00000572857 COL17A1Q9UMD9 1497 aaPredicted RBP34.36■■■■□ 3.09
CHRNB1-204ENST00000572857 RAPGEF6Q8TEU7 1601 aa34.32■■■■□ 3.08
CHRNB1-204ENST00000572857 MAGI3Q5TCQ9 1506 aa34.26■■■■□ 3.08
CHRNB1-204ENST00000572857 NUP153P49790 1475 aaKnown RBP34.26■■■■□ 3.07
CHRNB1-204ENST00000572857 EFCAB5A4FU69 1503 aa34.25■■■■□ 3.07
CHRNB1-204ENST00000572857 KDM4FA0A1W2PPD8 638 aa34.24■■■■□ 3.07
CHRNB1-204ENST00000572857 CFAP43Q8NDM7 1665 aa34.23■■■■□ 3.07
CHRNB1-204ENST00000572857 PLEKHD1A6NEE1 506 aa34.17■■■■□ 3.06
CHRNB1-204ENST00000572857 ATP1B4Q9UN42 357 aaPredicted RBP34.12■■■■□ 3.05
CHRNB1-204ENST00000572857 ABCA9Q8IUA7 1624 aa34.07■■■■□ 3.04
CHRNB1-204ENST00000572857 ARHGAP35Q9NRY4 1499 aa34.07■■■■□ 3.04
CHRNB1-204ENST00000572857 FMN1Q68DA7 1419 aa34.02■■■■□ 3.04
CHRNB1-204ENST00000572857 ARAP3Q8WWN8 1544 aa33.99■■■■□ 3.03
CHRNB1-204ENST00000572857 PHLDB1Q86UU1 1377 aa33.98■■■■□ 3.03
CHRNB1-204ENST00000572857 ADGRL1O94910 1474 aa33.98■■■■□ 3.03
CHRNB1-204ENST00000572857 CDK13Q14004 1512 aaKnown RBP33.98■■■■□ 3.03
CHRNB1-204ENST00000572857 RAPGEF3O95398 923 aa33.95■■■■□ 3.03
CHRNB1-204ENST00000572857 NEO1Q92859 1461 aa33.92■■■■□ 3.02
CHRNB1-204ENST00000572857 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP33.86■■■■□ 3.01
CHRNB1-204ENST00000572857 CDK11AQ9UQ88 783 aaPredicted RBP33.86■■■■□ 3.01
CHRNB1-204ENST00000572857 HECW1Q76N89 1606 aa33.86■■■■□ 3.01
CHRNB1-204ENST00000572857 FANCAO15360 1455 aa33.8■■■■□ 3
CHRNB1-204ENST00000572857 AKNAQ7Z591 1439 aa33.79■■■■□ 3
CHRNB1-204ENST00000572857 TTC37Q6PGP7 1564 aa33.78■■■■□ 3
CHRNB1-204ENST00000572857 DENND4BO75064 1496 aaPredicted RBP33.73■■■□□ 2.99
CHRNB1-204ENST00000572857 PLCH2O75038 1416 aa33.7■■■□□ 2.99
CHRNB1-204ENST00000572857 CLIP1P30622 1438 aa33.7■■■□□ 2.99
CHRNB1-204ENST00000572857 TROQ12816 1431 aaPredicted RBP33.68■■■□□ 2.98
CHRNB1-204ENST00000572857 CASKIN1Q8WXD9 1431 aa33.68■■■□□ 2.98
CHRNB1-204ENST00000572857 FRMPD1Q5SYB0 1578 aa33.68■■■□□ 2.98
CHRNB1-204ENST00000572857 CFAP74Q9C0B2 1584 aa33.65■■■□□ 2.98
CHRNB1-204ENST00000572857 ARID4BQ4LE39 1312 aaPredicted RBP33.65■■■□□ 2.98
CHRNB1-204ENST00000572857 EFCAB2Q5VUJ9 269 aa33.65■■■□□ 2.98
CHRNB1-204ENST00000572857 PCF11O94913 1555 aaKnown RBP33.62■■■□□ 2.97
CHRNB1-204ENST00000572857 SCAPERQ9BY12 1400 aa33.61■■■□□ 2.97
CHRNB1-204ENST00000572857 KIF14Q15058 1648 aa33.6■■■□□ 2.97
CHRNB1-204ENST00000572857 CCDC18Q5T9S5 1454 aa33.57■■■□□ 2.97
CHRNB1-204ENST00000572857 LRRIQ1Q96JM4 1722 aa33.57■■■□□ 2.96
CHRNB1-204ENST00000572857 RICTORQ6R327 1708 aa33.54■■■□□ 2.96
CHRNB1-204ENST00000572857 FYCO1Q9BQS8 1478 aa33.53■■■□□ 2.96
CHRNB1-204ENST00000572857 POGZQ7Z3K3 1410 aa33.5■■■□□ 2.95
CHRNB1-204ENST00000572857 MYO5CQ9NQX4 1742 aa33.5■■■□□ 2.95
CHRNB1-204ENST00000572857 ARHGAP5Q13017 1502 aa33.49■■■□□ 2.95
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms