RNA–Protein interactions for RNA: ENST00000572778.5

CHMP6-204, Transcript of charged multivesicular body protein 6, humanhuman

TSL 2

Gene CHMP6, Length 737 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-204ENST00000572778 SHROOM2Q13796 1616 aa34.79■■■■□ 3.16
CHMP6-204ENST00000572778 KIAA0586Q9BVV6 1533 aa34.78■■■■□ 3.16
CHMP6-204ENST00000572778 PRG4Q92954 1404 aaPredicted RBP34.77■■■■□ 3.16
CHMP6-204ENST00000572778 RAPGEF2Q9Y4G8 1499 aa34.76■■■■□ 3.15
CHMP6-204ENST00000572778 CHIC1Q5VXU3 224 aa34.73■■■■□ 3.15
CHMP6-204ENST00000572778 CSRNP3Q8WYN3 585 aa34.62■■■■□ 3.13
CHMP6-204ENST00000572778 PRXQ9BXM0 1461 aa34.58■■■■□ 3.13
CHMP6-204ENST00000572778 FAM9AQ8IZU1 332 aaPredicted RBP34.56■■■■□ 3.12
CHMP6-204ENST00000572778 EEA1Q15075 1411 aa34.55■■■■□ 3.12
CHMP6-204ENST00000572778 IQGAP2Q13576 1575 aa34.53■■■■□ 3.12
CHMP6-204ENST00000572778 CARMIL2Q6F5E8 1435 aa34.45■■■■□ 3.11
CHMP6-204ENST00000572778 TRHP20396 242 aaPredicted RBP34.43■■■■□ 3.1
CHMP6-204ENST00000572778 TTBK1Q5TCY1 1321 aaPredicted RBP34.41■■■■□ 3.1
CHMP6-204ENST00000572778 PTPRGP23470 1445 aa34.35■■■■□ 3.09
CHMP6-204ENST00000572778 TNIKQ9UKE5 1360 aa34.35■■■■□ 3.09
CHMP6-204ENST00000572778 UGGT2Q9NYU1 1516 aa34.35■■■■□ 3.09
CHMP6-204ENST00000572778 DISP1Q96F81 1524 aa34.32■■■■□ 3.08
CHMP6-204ENST00000572778 CTTNBP2Q8WZ74 1663 aa34.31■■■■□ 3.08
CHMP6-204ENST00000572778 NPM1P06748 294 aaKnown RBP eCLIP34.25■■■■□ 3.07
CHMP6-204ENST00000572778 KIAA0556O60303 1618 aa34.2■■■■□ 3.07
CHMP6-204ENST00000572778 GOLGA3Q08378 1498 aa34.18■■■■□ 3.06
CHMP6-204ENST00000572778 ADCY10Q96PN6 1610 aa34.16■■■■□ 3.06
CHMP6-204ENST00000572778 EHMT2Q96KQ7 1210 aa34.16■■■■□ 3.06
CHMP6-204ENST00000572778 KIF21BO75037 1637 aa34.15■■■■□ 3.06
CHMP6-204ENST00000572778 UACAQ9BZF9 1416 aa34.09■■■■□ 3.05
CHMP6-204ENST00000572778 RANGAP1P46060 587 aaPredicted RBP34.08■■■■□ 3.05
CHMP6-204ENST00000572778 P3H3Q8IVL6 736 aa34.08■■■■□ 3.05
CHMP6-204ENST00000572778 UBTFP17480 764 aaKnown RBP34.04■■■■□ 3.04
CHMP6-204ENST00000572778 UHRF1BP1LA0JNW5 1464 aa34.01■■■■□ 3.04
CHMP6-204ENST00000572778 ABCC2Q92887 1545 aa34■■■■□ 3.03
CHMP6-204ENST00000572778 MAPKBP1O60336 1514 aa33.97■■■■□ 3.03
CHMP6-204ENST00000572778 PLB1Q6P1J6 1458 aa33.94■■■■□ 3.02
CHMP6-204ENST00000572778 SAMD9Q5K651 1589 aa33.91■■■■□ 3.02
CHMP6-204ENST00000572778 FAM69CQ0P6D2 419 aa33.91■■■■□ 3.02
CHMP6-204ENST00000572778 ABCC10Q5T3U5 1492 aa33.88■■■■□ 3.01
CHMP6-204ENST00000572778 KDM5BQ9UGL1 1544 aa33.86■■■■□ 3.01
CHMP6-204ENST00000572778 ABCA8O94911 1581 aa33.84■■■■□ 3.01
CHMP6-204ENST00000572778 ASXL2Q76L83 1435 aa33.83■■■■□ 3.01
CHMP6-204ENST00000572778 FHOD3Q2V2M9 1422 aa33.81■■■■□ 3
CHMP6-204ENST00000572778 DIP2BQ9P265 1576 aa33.78■■■■□ 3
CHMP6-204ENST00000572778 KIF13AQ9H1H9 1805 aa33.77■■■■□ 3
CHMP6-204ENST00000572778 ZCCHC11Q5TAX3 1644 aaKnown RBP33.76■■■■□ 3
CHMP6-204ENST00000572778 EFCAB5A4FU69 1503 aa33.76■■■■□ 3
CHMP6-204ENST00000572778 ARID3CA6NKF2 412 aa33.73■■■□□ 2.99
CHMP6-204ENST00000572778 RAPGEF6Q8TEU7 1601 aa33.64■■■□□ 2.98
CHMP6-204ENST00000572778 ARHGAP35Q9NRY4 1499 aa33.63■■■□□ 2.97
CHMP6-204ENST00000572778 ATP10BO94823 1461 aa33.62■■■□□ 2.97
CHMP6-204ENST00000572778 WDR7Q9Y4E6 1490 aa33.62■■■□□ 2.97
CHMP6-204ENST00000572778 EPRSP07814 1512 aaKnown RBP33.61■■■□□ 2.97
CHMP6-204ENST00000572778 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP33.6■■■□□ 2.97
CHMP6-204ENST00000572778 HNRNPUL2Q1KMD3 747 aaKnown RBP33.6■■■□□ 2.97
CHMP6-204ENST00000572778 KCNH8Q96L42 1107 aa33.58■■■□□ 2.97
CHMP6-204ENST00000572778 GLI2P10070 1586 aa33.57■■■□□ 2.96
CHMP6-204ENST00000572778 NUP153P49790 1475 aaKnown RBP33.55■■■□□ 2.96
CHMP6-204ENST00000572778 FMN1Q68DA7 1419 aa33.51■■■□□ 2.95
CHMP6-204ENST00000572778 ATP1B4Q9UN42 357 aaPredicted RBP33.5■■■□□ 2.95
CHMP6-204ENST00000572778 TSPOAP1O95153 1857 aa33.48■■■□□ 2.95
CHMP6-204ENST00000572778 CLIP1P30622 1438 aa33.42■■■□□ 2.94
CHMP6-204ENST00000572778 MAP3K4Q9Y6R4 1608 aa33.39■■■□□ 2.93
CHMP6-204ENST00000572778 PLEKHD1A6NEE1 506 aa33.38■■■□□ 2.93
CHMP6-204ENST00000572778 CD109Q6YHK3 1445 aa33.36■■■□□ 2.93
CHMP6-204ENST00000572778 LOC105371045A0A1W2PR82 267 aa33.35■■■□□ 2.93
CHMP6-204ENST00000572778 PPRC1Q5VV67 1664 aaKnown RBP33.33■■■□□ 2.93
CHMP6-204ENST00000572778 CDK13Q14004 1512 aaKnown RBP33.32■■■□□ 2.92
CHMP6-204ENST00000572778 HECW1Q76N89 1606 aa33.31■■■□□ 2.92
CHMP6-204ENST00000572778 TEX14Q8IWB6 1497 aa33.31■■■□□ 2.92
CHMP6-204ENST00000572778 KDM6BO15054 1643 aa33.3■■■□□ 2.92
CHMP6-204ENST00000572778 CFAP43Q8NDM7 1665 aa33.27■■■□□ 2.92
CHMP6-204ENST00000572778 MAGI3Q5TCQ9 1506 aa33.24■■■□□ 2.91
CHMP6-204ENST00000572778 CEP162Q5TB80 1403 aa33.23■■■□□ 2.91
CHMP6-204ENST00000572778 CASKIN1Q8WXD9 1431 aa33.23■■■□□ 2.91
CHMP6-204ENST00000572778 CDK11AQ9UQ88 783 aaPredicted RBP33.22■■■□□ 2.91
CHMP6-204ENST00000572778 ABCA9Q8IUA7 1624 aa33.2■■■□□ 2.9
CHMP6-204ENST00000572778 PCF11O94913 1555 aaKnown RBP33.19■■■□□ 2.9
CHMP6-204ENST00000572778 COL17A1Q9UMD9 1497 aaPredicted RBP33.14■■■□□ 2.9
CHMP6-204ENST00000572778 FYCO1Q9BQS8 1478 aa33.12■■■□□ 2.89
CHMP6-204ENST00000572778 CCDC18Q5T9S5 1454 aa33.1■■■□□ 2.89
CHMP6-204ENST00000572778 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP33.07■■■□□ 2.89
CHMP6-204ENST00000572778 LRRIQ1Q96JM4 1722 aa33.05■■■□□ 2.88
CHMP6-204ENST00000572778 TROQ12816 1431 aaPredicted RBP33.05■■■□□ 2.88
CHMP6-204ENST00000572778 PHLDB1Q86UU1 1377 aa33.01■■■□□ 2.88
CHMP6-204ENST00000572778 TTC37Q6PGP7 1564 aa33■■■□□ 2.87
CHMP6-204ENST00000572778 NEO1Q92859 1461 aa32.99■■■□□ 2.87
CHMP6-204ENST00000572778 ARAP3Q8WWN8 1544 aa32.95■■■□□ 2.87
CHMP6-204ENST00000572778 KIF14Q15058 1648 aa32.95■■■□□ 2.86
CHMP6-204ENST00000572778 FANCAO15360 1455 aa32.93■■■□□ 2.86
CHMP6-204ENST00000572778 PLCH2O75038 1416 aa32.92■■■□□ 2.86
CHMP6-204ENST00000572778 AKNAQ7Z591 1439 aa32.89■■■□□ 2.86
CHMP6-204ENST00000572778 RAPGEF3O95398 923 aa32.89■■■□□ 2.86
CHMP6-204ENST00000572778 EFCAB2Q5VUJ9 269 aa32.85■■■□□ 2.85
CHMP6-204ENST00000572778 VPS8Q8N3P4 1428 aa32.83■■■□□ 2.85
CHMP6-204ENST00000572778 CFAP74Q9C0B2 1584 aa32.83■■■□□ 2.85
CHMP6-204ENST00000572778 MTUS2Q5JR59 1369 aa32.82■■■□□ 2.84
CHMP6-204ENST00000572778 DENND4BO75064 1496 aaPredicted RBP32.8■■■□□ 2.84
CHMP6-204ENST00000572778 MYO5CQ9NQX4 1742 aa32.79■■■□□ 2.84
CHMP6-204ENST00000572778 AEBP2Q6ZN18 517 aaPredicted RBP32.77■■■□□ 2.84
CHMP6-204ENST00000572778 ARHGAP5Q13017 1502 aa32.77■■■□□ 2.84
CHMP6-204ENST00000572778 ADGRL1O94910 1474 aa32.75■■■□□ 2.83
CHMP6-204ENST00000572778 SCAPERQ9BY12 1400 aa32.74■■■□□ 2.83
CHMP6-204ENST00000572778 FRMPD1Q5SYB0 1578 aa32.7■■■□□ 2.82
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms