RNA–Protein interactions for RNA: ENST00000572438.1

CHRNE-202, Transcript of cholinergic receptor nicotinic epsilon subunit, humanhuman

TSL 5

Gene CHRNE, Length 1,847 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNE-202ENST00000572438 CTTNBP2Q8WZ74 1663 aa32.1■■■□□ 2.73
CHRNE-202ENST00000572438 PPARGC1BQ86YN6 1023 aaKnown RBP32.07■■■□□ 2.73
CHRNE-202ENST00000572438 SNAPC4Q5SXM2 1469 aa32.05■■■□□ 2.72
CHRNE-202ENST00000572438 MAGI1Q96QZ7 1491 aaPredicted RBP31.99■■■□□ 2.71
CHRNE-202ENST00000572438 EFCAB5A4FU69 1503 aa31.97■■■□□ 2.71
CHRNE-202ENST00000572438 APLP2Q06481 763 aa31.91■■■□□ 2.7
CHRNE-202ENST00000572438 GRIN2AQ12879 1464 aa31.89■■■□□ 2.69
CHRNE-202ENST00000572438 SYNJ2O15056 1496 aa31.87■■■□□ 2.69
CHRNE-202ENST00000572438 SAMD9Q5K651 1589 aa31.82■■■□□ 2.69
CHRNE-202ENST00000572438 IQGAP2Q13576 1575 aa31.82■■■□□ 2.68
CHRNE-202ENST00000572438 FHOD3Q2V2M9 1422 aa31.82■■■□□ 2.68
CHRNE-202ENST00000572438 P3H3Q8IVL6 736 aa31.82■■■□□ 2.68
CHRNE-202ENST00000572438 TTBK1Q5TCY1 1321 aaPredicted RBP31.8■■■□□ 2.68
CHRNE-202ENST00000572438 CHMP7Q8WUX9 453 aaPredicted RBP31.79■■■□□ 2.68
CHRNE-202ENST00000572438 KIAA0586Q9BVV6 1533 aa31.76■■■□□ 2.67
CHRNE-202ENST00000572438 FMN1Q68DA7 1419 aa31.69■■■□□ 2.66
CHRNE-202ENST00000572438 FBLN2P98095 1184 aa31.69■■■□□ 2.66
CHRNE-202ENST00000572438 UGGT2Q9NYU1 1516 aa31.68■■■□□ 2.66
CHRNE-202ENST00000572438 PCF11O94913 1555 aaKnown RBP31.67■■■□□ 2.66
CHRNE-202ENST00000572438 CEP170Q5SW79 1584 aa31.66■■■□□ 2.66
CHRNE-202ENST00000572438 NUP160Q12769 1436 aa31.65■■■□□ 2.66
CHRNE-202ENST00000572438 MAP3K1Q13233 1512 aa31.65■■■□□ 2.66
CHRNE-202ENST00000572438 FYCO1Q9BQS8 1478 aa31.64■■■□□ 2.66
CHRNE-202ENST00000572438 CASKIN1Q8WXD9 1431 aa31.64■■■□□ 2.65
CHRNE-202ENST00000572438 KANK4Q5T7N3 995 aaPredicted RBP31.6■■■□□ 2.65
CHRNE-202ENST00000572438 TIAM1Q13009 1591 aa31.59■■■□□ 2.65
CHRNE-202ENST00000572438 DISP1Q96F81 1524 aa31.52■■■□□ 2.64
CHRNE-202ENST00000572438 CFAP43Q8NDM7 1665 aa31.5■■■□□ 2.63
CHRNE-202ENST00000572438 KIAA0556O60303 1618 aa31.5■■■□□ 2.63
CHRNE-202ENST00000572438 ATP1B4Q9UN42 357 aaPredicted RBP31.49■■■□□ 2.63
CHRNE-202ENST00000572438 LRRC9Q6ZRR7 1453 aa31.45■■■□□ 2.63
CHRNE-202ENST00000572438 CHD1O14646 1710 aa31.44■■■□□ 2.62
CHRNE-202ENST00000572438 JPH4Q96JJ6 628 aa31.42■■■□□ 2.62
CHRNE-202ENST00000572438 CARMIL2Q6F5E8 1435 aa31.36■■■□□ 2.61
CHRNE-202ENST00000572438 HECW1Q76N89 1606 aa31.33■■■□□ 2.61
CHRNE-202ENST00000572438 HRCP23327 699 aa31.33■■■□□ 2.61
CHRNE-202ENST00000572438 LRRIQ1Q96JM4 1722 aa31.3■■■□□ 2.6
CHRNE-202ENST00000572438 CCDC18Q5T9S5 1454 aa31.29■■■□□ 2.6
CHRNE-202ENST00000572438 RRBP1Q9P2E9 1410 aaKnown RBP31.28■■■□□ 2.6
CHRNE-202ENST00000572438 EPRSP07814 1512 aaKnown RBP31.23■■■□□ 2.59
CHRNE-202ENST00000572438 MTUS2Q5JR59 1369 aa31.21■■■□□ 2.59
CHRNE-202ENST00000572438 PRG4Q92954 1404 aaPredicted RBP31.2■■■□□ 2.59
CHRNE-202ENST00000572438 RAPGEF6Q8TEU7 1601 aa31.2■■■□□ 2.58
CHRNE-202ENST00000572438 PHLDB1Q86UU1 1377 aa31.18■■■□□ 2.58
CHRNE-202ENST00000572438 SHROOM2Q13796 1616 aa31.18■■■□□ 2.58
CHRNE-202ENST00000572438 CCNB3Q8WWL7 1395 aa31.17■■■□□ 2.58
CHRNE-202ENST00000572438 EHBP1L1Q8N3D4 1523 aa31.15■■■□□ 2.58
CHRNE-202ENST00000572438 NUP153P49790 1475 aaKnown RBP31.15■■■□□ 2.58
CHRNE-202ENST00000572438 HNRNPUL2Q1KMD3 747 aaKnown RBP31.14■■■□□ 2.58
CHRNE-202ENST00000572438 CDK13Q14004 1512 aaKnown RBP31.13■■■□□ 2.57
CHRNE-202ENST00000572438 CLASP1Q7Z460 1538 aa31.13■■■□□ 2.57
CHRNE-202ENST00000572438 PLB1Q6P1J6 1458 aa31.11■■■□□ 2.57
CHRNE-202ENST00000572438 MAGI3Q5TCQ9 1506 aa31.1■■■□□ 2.57
CHRNE-202ENST00000572438 NCOA2Q15596 1464 aa31.05■■■□□ 2.56
CHRNE-202ENST00000572438 SUPT6HQ7KZ85 1726 aaKnown RBP31.04■■■□□ 2.56
CHRNE-202ENST00000572438 ARID3CA6NKF2 412 aa31.04■■■□□ 2.56
CHRNE-202ENST00000572438 ABCA8O94911 1581 aa31.04■■■□□ 2.56
CHRNE-202ENST00000572438 PTPRGP23470 1445 aa31.04■■■□□ 2.56
CHRNE-202ENST00000572438 OSCARQ8IYS5 282 aa31.03■■■□□ 2.56
CHRNE-202ENST00000572438 ARHGEF11O15085 1522 aa31■■■□□ 2.55
CHRNE-202ENST00000572438 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.98■■■□□ 2.55
CHRNE-202ENST00000572438 CDK11AQ9UQ88 783 aaPredicted RBP30.96■■■□□ 2.55
CHRNE-202ENST00000572438 FGD6Q6ZV73 1430 aa30.95■■■□□ 2.54
CHRNE-202ENST00000572438 ZEB1P37275 1124 aaPredicted RBP30.94■■■□□ 2.54
CHRNE-202ENST00000572438 MYOM3Q5VTT5 1437 aa30.94■■■□□ 2.54
CHRNE-202ENST00000572438 ERCC6L2Q5T890 1561 aa30.94■■■□□ 2.54
CHRNE-202ENST00000572438 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP30.94■■■□□ 2.54
CHRNE-202ENST00000572438 FAM50AQ14320 339 aaKnown RBP30.91■■■□□ 2.54
CHRNE-202ENST00000572438 CCER1Q8TC90 406 aaPredicted RBP30.9■■■□□ 2.54
CHRNE-202ENST00000572438 UACAQ9BZF9 1416 aa30.86■■■□□ 2.53
CHRNE-202ENST00000572438 TROQ12816 1431 aaPredicted RBP30.85■■■□□ 2.53
CHRNE-202ENST00000572438 ATP10BO94823 1461 aa30.85■■■□□ 2.53
CHRNE-202ENST00000572438 ITGAEP38570 1179 aa30.84■■■□□ 2.53
CHRNE-202ENST00000572438 MIA2Q96PC5 1412 aa30.76■■■□□ 2.51
CHRNE-202ENST00000572438 ABCC2Q92887 1545 aa30.75■■■□□ 2.51
CHRNE-202ENST00000572438 PTPN23Q9H3S7 1636 aa30.75■■■□□ 2.51
CHRNE-202ENST00000572438 ADCY10Q96PN6 1610 aa30.74■■■□□ 2.51
CHRNE-202ENST00000572438 PLEKHD1A6NEE1 506 aa30.74■■■□□ 2.51
CHRNE-202ENST00000572438 TCOF1Q13428 1488 aaKnown RBP30.74■■■□□ 2.51
CHRNE-202ENST00000572438 UHRF1BP1LA0JNW5 1464 aa30.68■■■□□ 2.5
CHRNE-202ENST00000572438 KIF14Q15058 1648 aa30.67■■■□□ 2.5
CHRNE-202ENST00000572438 SETD5Q9C0A6 1442 aa30.62■■■□□ 2.49
CHRNE-202ENST00000572438 RAB3GAP2Q9H2M9 1393 aa30.6■■■□□ 2.49
CHRNE-202ENST00000572438 PTPRKQ15262 1439 aa30.59■■■□□ 2.49
CHRNE-202ENST00000572438 GPATCH8Q9UKJ3 1502 aaKnown RBP30.59■■■□□ 2.49
CHRNE-202ENST00000572438 ITSN2Q9NZM3 1697 aa30.58■■■□□ 2.49
CHRNE-202ENST00000572438 ABCC10Q5T3U5 1492 aa30.58■■■□□ 2.49
CHRNE-202ENST00000572438 KDM5BQ9UGL1 1544 aa30.56■■■□□ 2.48
CHRNE-202ENST00000572438 RIMBP3CA6NJZ7 1639 aa30.55■■■□□ 2.48
CHRNE-202ENST00000572438 RIMBP3BA6NNM3 1639 aa30.55■■■□□ 2.48
CHRNE-202ENST00000572438 RIMBP3Q9UFD9 1639 aa30.55■■■□□ 2.48
CHRNE-202ENST00000572438 DNAJC5Q9H3Z4 198 aa30.54■■■□□ 2.48
CHRNE-202ENST00000572438 DHX57Q6P158 1386 aaKnown RBP30.54■■■□□ 2.48
CHRNE-202ENST00000572438 CFDP1Q9UEE9 299 aaPredicted RBP30.52■■■□□ 2.48
CHRNE-202ENST00000572438 ZCCHC11Q5TAX3 1644 aaKnown RBP30.51■■■□□ 2.47
CHRNE-202ENST00000572438 HFM1A2PYH4 1435 aa30.49■■■□□ 2.47
CHRNE-202ENST00000572438 ZNF644Q9H582 1327 aaPredicted RBP30.47■■■□□ 2.47
CHRNE-202ENST00000572438 CAMSAP2Q08AD1 1489 aa30.46■■■□□ 2.47
CHRNE-202ENST00000572438 CDC42BPAQ5VT25 1732 aa30.45■■■□□ 2.47
CHRNE-202ENST00000572438 CLSPNQ9HAW4 1339 aa30.45■■■□□ 2.46
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms