RNA–Protein interactions for RNA: ENST00000571937.1

ITGAE-205, Transcript of integrin subunit alpha E, humanhuman

TSL 2

Gene ITGAE, Length 1,982 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGAE-205ENST00000571937 CLIP1P30622 1438 aa15.46■□□□□ 0.06
ITGAE-205ENST00000571937 OSCARQ8IYS5 282 aa15.45■□□□□ 0.06
ITGAE-205ENST00000571937 GRIN2AQ12879 1464 aa15.44■□□□□ 0.06
ITGAE-205ENST00000571937 CEP170Q5SW79 1584 aa15.35■□□□□ 0.05
ITGAE-205ENST00000571937 NUP160Q12769 1436 aa15.32■□□□□ 0.04
ITGAE-205ENST00000571937 PPARGC1BQ86YN6 1023 aaKnown RBP15.3■□□□□ 0.04
ITGAE-205ENST00000571937 VPS8Q8N3P4 1428 aa15.3■□□□□ 0.04
ITGAE-205ENST00000571937 ARHGAP35Q9NRY4 1499 aa15.28■□□□□ 0.04
ITGAE-205ENST00000571937 PCGF6Q9BYE7 350 aa15.27■□□□□ 0.04
ITGAE-205ENST00000571937 CLASP1Q7Z460 1538 aa15.27■□□□□ 0.03
ITGAE-205ENST00000571937 CTTNBP2Q8WZ74 1663 aa15.27■□□□□ 0.03
ITGAE-205ENST00000571937 ARAP1Q96P48 1450 aa15.27■□□□□ 0.03
ITGAE-205ENST00000571937 APLP2Q06481 763 aa15.26■□□□□ 0.03
ITGAE-205ENST00000571937 TRIM26Q12899 539 aaPredicted RBP15.26■□□□□ 0.03
ITGAE-205ENST00000571937 JPH4Q96JJ6 628 aa15.25■□□□□ 0.03
ITGAE-205ENST00000571937 KIAA0586Q9BVV6 1533 aa15.25■□□□□ 0.03
ITGAE-205ENST00000571937 DNAJC5Q9H3Z4 198 aa15.25■□□□□ 0.03
ITGAE-205ENST00000571937 P3H3Q8IVL6 736 aa15.24■□□□□ 0.03
ITGAE-205ENST00000571937 TTBK1Q5TCY1 1321 aaPredicted RBP15.23■□□□□ 0.03
ITGAE-205ENST00000571937 IQGAP2Q13576 1575 aa15.22■□□□□ 0.03
ITGAE-205ENST00000571937 PRG4Q92954 1404 aaPredicted RBP15.2■□□□□ 0.02
ITGAE-205ENST00000571937 EFCAB5A4FU69 1503 aa15.19■□□□□ 0.02
ITGAE-205ENST00000571937 ERCC6L2Q5T890 1561 aa15.18■□□□□ 0.02
ITGAE-205ENST00000571937 FHOD3Q2V2M9 1422 aa15.16■□□□□ 0.02
ITGAE-205ENST00000571937 ARHGEF11O15085 1522 aa15.16■□□□□ 0.02
ITGAE-205ENST00000571937 SHROOM2Q13796 1616 aa15.15■□□□□ 0.02
ITGAE-205ENST00000571937 RIMBP3CA6NJZ7 1639 aa15.13■□□□□ 0.01
ITGAE-205ENST00000571937 RIMBP3BA6NNM3 1639 aa15.13■□□□□ 0.01
ITGAE-205ENST00000571937 RIMBP3Q9UFD9 1639 aa15.13■□□□□ 0.01
ITGAE-205ENST00000571937 CYB5RLQ6IPT4 315 aa15.12■□□□□ 0.01
ITGAE-205ENST00000571937 ATP1B4Q9UN42 357 aaPredicted RBP15.12■□□□□ 0.01
ITGAE-205ENST00000571937 CARMIL2Q6F5E8 1435 aa15.11■□□□□ 0.01
ITGAE-205ENST00000571937 SAMD9Q5K651 1589 aa15.11■□□□□ 0.01
ITGAE-205ENST00000571937 UGGT2Q9NYU1 1516 aa15.11■□□□□ 0.01
ITGAE-205ENST00000571937 DISP1Q96F81 1524 aa15.1■□□□□ 0.01
ITGAE-205ENST00000571937 FMN1Q68DA7 1419 aa15.1■□□□□ 0.01
ITGAE-205ENST00000571937 KIAA0556O60303 1618 aa15.06■□□□□ 0
ITGAE-205ENST00000571937 PTPRGP23470 1445 aa15.04■□□□□ -0
ITGAE-205ENST00000571937 CASKIN1Q8WXD9 1431 aa15.04■□□□□ -0
ITGAE-205ENST00000571937 PCF11O94913 1555 aaKnown RBP15.04■□□□□ -0
ITGAE-205ENST00000571937 KANK4Q5T7N3 995 aaPredicted RBP15.04■□□□□ -0
ITGAE-205ENST00000571937 FYCO1Q9BQS8 1478 aa15.03■□□□□ -0
ITGAE-205ENST00000571937 MAP3K1Q13233 1512 aa14.99□□□□□ -0.01
ITGAE-205ENST00000571937 TIAM1Q13009 1591 aa14.99□□□□□ -0.01
ITGAE-205ENST00000571937 ARID3CA6NKF2 412 aa14.99□□□□□ -0.01
ITGAE-205ENST00000571937 PLB1Q6P1J6 1458 aa14.96□□□□□ -0.01
ITGAE-205ENST00000571937 LRRC9Q6ZRR7 1453 aa14.94□□□□□ -0.02
ITGAE-205ENST00000571937 CFAP43Q8NDM7 1665 aa14.93□□□□□ -0.02
ITGAE-205ENST00000571937 UACAQ9BZF9 1416 aa14.92□□□□□ -0.02
ITGAE-205ENST00000571937 HECW1Q76N89 1606 aa14.91□□□□□ -0.02
ITGAE-205ENST00000571937 ADCY10Q96PN6 1610 aa14.9□□□□□ -0.02
ITGAE-205ENST00000571937 CCDC18Q5T9S5 1454 aa14.89□□□□□ -0.03
ITGAE-205ENST00000571937 MTUS2Q5JR59 1369 aa14.89□□□□□ -0.03
ITGAE-205ENST00000571937 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.89□□□□□ -0.03
ITGAE-205ENST00000571937 HNRNPUL2Q1KMD3 747 aaKnown RBP14.89□□□□□ -0.03
ITGAE-205ENST00000571937 NPM1P06748 294 aaKnown RBP eCLIP14.89□□□□□ -0.03
ITGAE-205ENST00000571937 EPRSP07814 1512 aaKnown RBP14.86□□□□□ -0.03
ITGAE-205ENST00000571937 ABCC2Q92887 1545 aa14.86□□□□□ -0.03
ITGAE-205ENST00000571937 ABCA8O94911 1581 aa14.86□□□□□ -0.03
ITGAE-205ENST00000571937 RAPGEF6Q8TEU7 1601 aa14.86□□□□□ -0.03
ITGAE-205ENST00000571937 LRRIQ1Q96JM4 1722 aa14.85□□□□□ -0.03
ITGAE-205ENST00000571937 CDK13Q14004 1512 aaKnown RBP14.83□□□□□ -0.04
ITGAE-205ENST00000571937 UHRF1BP1LA0JNW5 1464 aa14.83□□□□□ -0.04
ITGAE-205ENST00000571937 NUP153P49790 1475 aaKnown RBP14.83□□□□□ -0.04
ITGAE-205ENST00000571937 CDK11AQ9UQ88 783 aaPredicted RBP14.82□□□□□ -0.04
ITGAE-205ENST00000571937 RRBP1Q9P2E9 1410 aaKnown RBP14.82□□□□□ -0.04
ITGAE-205ENST00000571937 PHLDB1Q86UU1 1377 aa14.82□□□□□ -0.04
ITGAE-205ENST00000571937 CCNB3Q8WWL7 1395 aa14.82□□□□□ -0.04
ITGAE-205ENST00000571937 EHBP1L1Q8N3D4 1523 aa14.81□□□□□ -0.04
ITGAE-205ENST00000571937 ATP10BO94823 1461 aa14.8□□□□□ -0.04
ITGAE-205ENST00000571937 ZCCHC11Q5TAX3 1644 aaKnown RBP14.79□□□□□ -0.04
ITGAE-205ENST00000571937 KDM5BQ9UGL1 1544 aa14.78□□□□□ -0.04
ITGAE-205ENST00000571937 KCNH8Q96L42 1107 aa14.77□□□□□ -0.04
ITGAE-205ENST00000571937 MAGI3Q5TCQ9 1506 aa14.77□□□□□ -0.05
ITGAE-205ENST00000571937 NCOA2Q15596 1464 aa14.77□□□□□ -0.05
ITGAE-205ENST00000571937 FAM50AQ14320 339 aaKnown RBP14.76□□□□□ -0.05
ITGAE-205ENST00000571937 SUPT6HQ7KZ85 1726 aaKnown RBP14.76□□□□□ -0.05
ITGAE-205ENST00000571937 TRHP20396 242 aaPredicted RBP14.76□□□□□ -0.05
ITGAE-205ENST00000571937 HRCP23327 699 aa14.76□□□□□ -0.05
ITGAE-205ENST00000571937 ASXL2Q76L83 1435 aa14.75□□□□□ -0.05
ITGAE-205ENST00000571937 ITGAEP38570 1179 aa14.75□□□□□ -0.05
ITGAE-205ENST00000571937 PLEKHD1A6NEE1 506 aa14.73□□□□□ -0.05
ITGAE-205ENST00000571937 MYOM3Q5VTT5 1437 aa14.71□□□□□ -0.05
ITGAE-205ENST00000571937 FGD6Q6ZV73 1430 aa14.71□□□□□ -0.06
ITGAE-205ENST00000571937 TROQ12816 1431 aaPredicted RBP14.7□□□□□ -0.06
ITGAE-205ENST00000571937 FAM69CQ0P6D2 419 aa14.7□□□□□ -0.06
ITGAE-205ENST00000571937 CCER1Q8TC90 406 aaPredicted RBP14.69□□□□□ -0.06
ITGAE-205ENST00000571937 MAPKBP1O60336 1514 aa14.69□□□□□ -0.06
ITGAE-205ENST00000571937 WDR7Q9Y4E6 1490 aa14.69□□□□□ -0.06
ITGAE-205ENST00000571937 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.67□□□□□ -0.06
ITGAE-205ENST00000571937 ZEB1P37275 1124 aaPredicted RBP14.64□□□□□ -0.07
ITGAE-205ENST00000571937 ABCC10Q5T3U5 1492 aa14.63□□□□□ -0.07
ITGAE-205ENST00000571937 MIA2Q96PC5 1412 aa14.63□□□□□ -0.07
ITGAE-205ENST00000571937 PTPN23Q9H3S7 1636 aa14.62□□□□□ -0.07
ITGAE-205ENST00000571937 DIP2BQ9P265 1576 aa14.62□□□□□ -0.07
ITGAE-205ENST00000571937 KIF14Q15058 1648 aa14.6□□□□□ -0.07
ITGAE-205ENST00000571937 CFDP1Q9UEE9 299 aaPredicted RBP14.6□□□□□ -0.07
ITGAE-205ENST00000571937 KIF13AQ9H1H9 1805 aa14.59□□□□□ -0.07
ITGAE-205ENST00000571937 TSPOAP1O95153 1857 aa14.58□□□□□ -0.07
ITGAE-205ENST00000571937 TCOF1Q13428 1488 aaKnown RBP14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms