RNA–Protein interactions for RNA: ENST00000571880.1

RAB40B-205, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40B, Length 1,020 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-205ENST00000571880 IGF1RP08069 1367 aa28.88■■■□□ 2.21
RAB40B-205ENST00000571880 JPH4Q96JJ6 628 aa28.85■■■□□ 2.21
RAB40B-205ENST00000571880 KIF13AQ9H1H9 1805 aa28.81■■■□□ 2.2
RAB40B-205ENST00000571880 KIAA0586Q9BVV6 1533 aa28.78■■■□□ 2.2
RAB40B-205ENST00000571880 ADCY10Q96PN6 1610 aa28.74■■■□□ 2.19
RAB40B-205ENST00000571880 CARMIL1Q5VZK9 1371 aa28.74■■■□□ 2.19
RAB40B-205ENST00000571880 IQGAP2Q13576 1575 aa28.66■■■□□ 2.18
RAB40B-205ENST00000571880 TTBK1Q5TCY1 1321 aaPredicted RBP28.62■■■□□ 2.17
RAB40B-205ENST00000571880 MAPKBP1O60336 1514 aa28.55■■■□□ 2.16
RAB40B-205ENST00000571880 DIP2BQ9P265 1576 aa28.54■■■□□ 2.16
RAB40B-205ENST00000571880 TSPOAP1O95153 1857 aa28.53■■■□□ 2.16
RAB40B-205ENST00000571880 RAPGEF2Q9Y4G8 1499 aa28.53■■■□□ 2.16
RAB40B-205ENST00000571880 CTTNBP2Q8WZ74 1663 aa28.52■■■□□ 2.16
RAB40B-205ENST00000571880 NPM1P06748 294 aaKnown RBP eCLIP28.49■■■□□ 2.15
RAB40B-205ENST00000571880 ABCC10Q5T3U5 1492 aa28.48■■■□□ 2.15
RAB40B-205ENST00000571880 PTPRGP23470 1445 aa28.48■■■□□ 2.15
RAB40B-205ENST00000571880 CARMIL2Q6F5E8 1435 aa28.47■■■□□ 2.15
RAB40B-205ENST00000571880 DISP1Q96F81 1524 aa28.46■■■□□ 2.15
RAB40B-205ENST00000571880 TNIKQ9UKE5 1360 aa28.44■■■□□ 2.14
RAB40B-205ENST00000571880 FAM69CQ0P6D2 419 aa28.43■■■□□ 2.14
RAB40B-205ENST00000571880 KIAA0556O60303 1618 aa28.43■■■□□ 2.14
RAB40B-205ENST00000571880 UGGT2Q9NYU1 1516 aa28.4■■■□□ 2.14
RAB40B-205ENST00000571880 ABCC2Q92887 1545 aa28.36■■■□□ 2.13
RAB40B-205ENST00000571880 ZCCHC11Q5TAX3 1644 aaKnown RBP28.29■■■□□ 2.12
RAB40B-205ENST00000571880 UACAQ9BZF9 1416 aa28.28■■■□□ 2.12
RAB40B-205ENST00000571880 KDM6BO15054 1643 aa28.28■■■□□ 2.12
RAB40B-205ENST00000571880 UHRF1BP1LA0JNW5 1464 aa28.27■■■□□ 2.12
RAB40B-205ENST00000571880 ASXL2Q76L83 1435 aa28.26■■■□□ 2.12
RAB40B-205ENST00000571880 PRXQ9BXM0 1461 aa28.25■■■□□ 2.11
RAB40B-205ENST00000571880 PPRC1Q5VV67 1664 aaKnown RBP28.24■■■□□ 2.11
RAB40B-205ENST00000571880 AEBP2Q6ZN18 517 aaPredicted RBP28.22■■■□□ 2.11
RAB40B-205ENST00000571880 PLB1Q6P1J6 1458 aa28.17■■■□□ 2.1
RAB40B-205ENST00000571880 KDM5BQ9UGL1 1544 aa28.17■■■□□ 2.1
RAB40B-205ENST00000571880 GLI2P10070 1586 aa28.14■■■□□ 2.1
RAB40B-205ENST00000571880 GOLGA3Q08378 1498 aa28.14■■■□□ 2.09
RAB40B-205ENST00000571880 MAP3K4Q9Y6R4 1608 aa28.11■■■□□ 2.09
RAB40B-205ENST00000571880 ABCA8O94911 1581 aa28.1■■■□□ 2.09
RAB40B-205ENST00000571880 EPRSP07814 1512 aaKnown RBP28.09■■■□□ 2.09
RAB40B-205ENST00000571880 WDR7Q9Y4E6 1490 aa28.02■■■□□ 2.08
RAB40B-205ENST00000571880 P3H3Q8IVL6 736 aa28.01■■■□□ 2.07
RAB40B-205ENST00000571880 CSRNP3Q8WYN3 585 aa28■■■□□ 2.07
RAB40B-205ENST00000571880 SAMD9Q5K651 1589 aa27.99■■■□□ 2.07
RAB40B-205ENST00000571880 FAM9AQ8IZU1 332 aaPredicted RBP27.99■■■□□ 2.07
RAB40B-205ENST00000571880 ARID3CA6NKF2 412 aa27.97■■■□□ 2.07
RAB40B-205ENST00000571880 RANGAP1P46060 587 aaPredicted RBP27.93■■■□□ 2.06
RAB40B-205ENST00000571880 CFAP43Q8NDM7 1665 aa27.92■■■□□ 2.06
RAB40B-205ENST00000571880 EEA1Q15075 1411 aa27.92■■■□□ 2.06
RAB40B-205ENST00000571880 TEX14Q8IWB6 1497 aa27.89■■■□□ 2.05
RAB40B-205ENST00000571880 COL17A1Q9UMD9 1497 aaPredicted RBP27.89■■■□□ 2.05
RAB40B-205ENST00000571880 RAPGEF6Q8TEU7 1601 aa27.89■■■□□ 2.05
RAB40B-205ENST00000571880 KIF21BO75037 1637 aa27.86■■■□□ 2.05
RAB40B-205ENST00000571880 KCNH8Q96L42 1107 aa27.86■■■□□ 2.05
RAB40B-205ENST00000571880 FHOD3Q2V2M9 1422 aa27.82■■■□□ 2.04
RAB40B-205ENST00000571880 EHMT2Q96KQ7 1210 aa27.81■■■□□ 2.04
RAB40B-205ENST00000571880 ATP10BO94823 1461 aa27.8■■■□□ 2.04
RAB40B-205ENST00000571880 CD109Q6YHK3 1445 aa27.78■■■□□ 2.04
RAB40B-205ENST00000571880 KDM4FA0A1W2PPD8 638 aa27.77■■■□□ 2.04
RAB40B-205ENST00000571880 MAGI3Q5TCQ9 1506 aa27.74■■■□□ 2.03
RAB40B-205ENST00000571880 ADGRL1O94910 1474 aa27.71■■■□□ 2.03
RAB40B-205ENST00000571880 NUP153P49790 1475 aaKnown RBP27.71■■■□□ 2.03
RAB40B-205ENST00000571880 ABCA9Q8IUA7 1624 aa27.7■■■□□ 2.03
RAB40B-205ENST00000571880 EFCAB5A4FU69 1503 aa27.68■■■□□ 2.02
RAB40B-205ENST00000571880 CHIC1Q5VXU3 224 aa27.67■■■□□ 2.02
RAB40B-205ENST00000571880 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.66■■■□□ 2.02
RAB40B-205ENST00000571880 HNRNPUL2Q1KMD3 747 aaKnown RBP27.66■■■□□ 2.02
RAB40B-205ENST00000571880 CDK13Q14004 1512 aaKnown RBP27.57■■■□□ 2
RAB40B-205ENST00000571880 UBTFP17480 764 aaKnown RBP27.55■■■□□ 2
RAB40B-205ENST00000571880 TTC37Q6PGP7 1564 aa27.52■■■□□ 2
RAB40B-205ENST00000571880 ARAP3Q8WWN8 1544 aa27.51■■■□□ 2
RAB40B-205ENST00000571880 FRMPD1Q5SYB0 1578 aa27.5■■□□□ 1.99
RAB40B-205ENST00000571880 ARHGAP35Q9NRY4 1499 aa27.48■■□□□ 1.99
RAB40B-205ENST00000571880 HECW1Q76N89 1606 aa27.47■■□□□ 1.99
RAB40B-205ENST00000571880 LRRIQ1Q96JM4 1722 aa27.46■■□□□ 1.99
RAB40B-205ENST00000571880 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.46■■□□□ 1.99
RAB40B-205ENST00000571880 NEO1Q92859 1461 aa27.44■■□□□ 1.98
RAB40B-205ENST00000571880 RICTORQ6R327 1708 aa27.41■■□□□ 1.98
RAB40B-205ENST00000571880 PLEKHD1A6NEE1 506 aa27.4■■□□□ 1.98
RAB40B-205ENST00000571880 RAPGEF3O95398 923 aa27.4■■□□□ 1.98
RAB40B-205ENST00000571880 ATP1B4Q9UN42 357 aaPredicted RBP27.4■■□□□ 1.98
RAB40B-205ENST00000571880 CFAP74Q9C0B2 1584 aa27.39■■□□□ 1.98
RAB40B-205ENST00000571880 FMN1Q68DA7 1419 aa27.35■■□□□ 1.97
RAB40B-205ENST00000571880 KIF14Q15058 1648 aa27.35■■□□□ 1.97
RAB40B-205ENST00000571880 FANCAO15360 1455 aa27.34■■□□□ 1.97
RAB40B-205ENST00000571880 MYO5CQ9NQX4 1742 aa27.34■■□□□ 1.97
RAB40B-205ENST00000571880 HECW2Q9P2P5 1572 aa27.33■■□□□ 1.97
RAB40B-205ENST00000571880 PHLDB1Q86UU1 1377 aa27.33■■□□□ 1.97
RAB40B-205ENST00000571880 PCF11O94913 1555 aaKnown RBP27.32■■□□□ 1.96
RAB40B-205ENST00000571880 ARHGEF40Q8TER5 1519 aa27.31■■□□□ 1.96
RAB40B-205ENST00000571880 AKNAQ7Z591 1439 aa27.29■■□□□ 1.96
RAB40B-205ENST00000571880 ADAMTSL3P82987 1691 aa27.27■■□□□ 1.96
RAB40B-205ENST00000571880 DENND4BO75064 1496 aaPredicted RBP27.27■■□□□ 1.96
RAB40B-205ENST00000571880 BCORL1Q5H9F3 1711 aa27.27■■□□□ 1.96
RAB40B-205ENST00000571880 SIGLEC1Q9BZZ2 1709 aa27.24■■□□□ 1.95
RAB40B-205ENST00000571880 MADDQ8WXG6 1647 aa27.24■■□□□ 1.95
RAB40B-205ENST00000571880 RIMS1Q86UR5 1692 aaKnown RBP27.2■■□□□ 1.94
RAB40B-205ENST00000571880 ZMYM4Q5VZL5 1548 aa27.2■■□□□ 1.94
RAB40B-205ENST00000571880 ZFYVE16Q7Z3T8 1539 aa27.18■■□□□ 1.94
RAB40B-205ENST00000571880 ARID4BQ4LE39 1312 aaPredicted RBP27.17■■□□□ 1.94
RAB40B-205ENST00000571880 PLCH2O75038 1416 aa27.16■■□□□ 1.94
RAB40B-205ENST00000571880 TROQ12816 1431 aaPredicted RBP27.16■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms