RNA–Protein interactions for RNA: ENST00000571739.5

TRAPPC1-203, Transcript of trafficking protein particle complex 1, humanhuman

TSL 3

Gene TRAPPC1, Length 648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-203ENST00000571739 FAM9AQ8IZU1 332 aaPredicted RBP14.57□□□□□ -0.08
TRAPPC1-203ENST00000571739 RAPGEF2Q9Y4G8 1499 aa14.57□□□□□ -0.08
TRAPPC1-203ENST00000571739 PRXQ9BXM0 1461 aa14.55□□□□□ -0.08
TRAPPC1-203ENST00000571739 KIAA0586Q9BVV6 1533 aa14.55□□□□□ -0.08
TRAPPC1-203ENST00000571739 ERCC6L2Q5T890 1561 aa14.53□□□□□ -0.08
TRAPPC1-203ENST00000571739 ARAP1Q96P48 1450 aa14.53□□□□□ -0.08
TRAPPC1-203ENST00000571739 SHROOM2Q13796 1616 aa14.52□□□□□ -0.09
TRAPPC1-203ENST00000571739 PRG4Q92954 1404 aaPredicted RBP14.51□□□□□ -0.09
TRAPPC1-203ENST00000571739 EEA1Q15075 1411 aa14.5□□□□□ -0.09
TRAPPC1-203ENST00000571739 IQGAP2Q13576 1575 aa14.41□□□□□ -0.1
TRAPPC1-203ENST00000571739 DISP1Q96F81 1524 aa14.38□□□□□ -0.11
TRAPPC1-203ENST00000571739 EHMT2Q96KQ7 1210 aa14.38□□□□□ -0.11
TRAPPC1-203ENST00000571739 UGGT2Q9NYU1 1516 aa14.37□□□□□ -0.11
TRAPPC1-203ENST00000571739 CARMIL2Q6F5E8 1435 aa14.36□□□□□ -0.11
TRAPPC1-203ENST00000571739 TTBK1Q5TCY1 1321 aaPredicted RBP14.36□□□□□ -0.11
TRAPPC1-203ENST00000571739 PTPRGP23470 1445 aa14.35□□□□□ -0.11
TRAPPC1-203ENST00000571739 TNIKQ9UKE5 1360 aa14.34□□□□□ -0.11
TRAPPC1-203ENST00000571739 KIF21BO75037 1637 aa14.33□□□□□ -0.11
TRAPPC1-203ENST00000571739 CTTNBP2Q8WZ74 1663 aa14.33□□□□□ -0.11
TRAPPC1-203ENST00000571739 UBTFP17480 764 aaKnown RBP14.32□□□□□ -0.12
TRAPPC1-203ENST00000571739 P3H3Q8IVL6 736 aa14.31□□□□□ -0.12
TRAPPC1-203ENST00000571739 RANGAP1P46060 587 aaPredicted RBP14.3□□□□□ -0.12
TRAPPC1-203ENST00000571739 KIAA0556O60303 1618 aa14.28□□□□□ -0.12
TRAPPC1-203ENST00000571739 GOLGA3Q08378 1498 aa14.27□□□□□ -0.12
TRAPPC1-203ENST00000571739 TRHP20396 242 aaPredicted RBP14.26□□□□□ -0.13
TRAPPC1-203ENST00000571739 NPM1P06748 294 aaKnown RBP eCLIP14.24□□□□□ -0.13
TRAPPC1-203ENST00000571739 UACAQ9BZF9 1416 aa14.24□□□□□ -0.13
TRAPPC1-203ENST00000571739 ADCY10Q96PN6 1610 aa14.23□□□□□ -0.13
TRAPPC1-203ENST00000571739 UHRF1BP1LA0JNW5 1464 aa14.2□□□□□ -0.14
TRAPPC1-203ENST00000571739 PLB1Q6P1J6 1458 aa14.2□□□□□ -0.14
TRAPPC1-203ENST00000571739 SAMD9Q5K651 1589 aa14.2□□□□□ -0.14
TRAPPC1-203ENST00000571739 LOC105371045A0A1W2PR82 267 aa14.19□□□□□ -0.14
TRAPPC1-203ENST00000571739 FHOD3Q2V2M9 1422 aa14.17□□□□□ -0.14
TRAPPC1-203ENST00000571739 ABCC2Q92887 1545 aa14.16□□□□□ -0.14
TRAPPC1-203ENST00000571739 ABCA8O94911 1581 aa14.15□□□□□ -0.14
TRAPPC1-203ENST00000571739 KDM5BQ9UGL1 1544 aa14.15□□□□□ -0.14
TRAPPC1-203ENST00000571739 ARHGAP35Q9NRY4 1499 aa14.14□□□□□ -0.15
TRAPPC1-203ENST00000571739 MAPKBP1O60336 1514 aa14.12□□□□□ -0.15
TRAPPC1-203ENST00000571739 ARID3CA6NKF2 412 aa14.12□□□□□ -0.15
TRAPPC1-203ENST00000571739 FAM69CQ0P6D2 419 aa14.12□□□□□ -0.15
TRAPPC1-203ENST00000571739 EFCAB5A4FU69 1503 aa14.11□□□□□ -0.15
TRAPPC1-203ENST00000571739 ASXL2Q76L83 1435 aa14.1□□□□□ -0.15
TRAPPC1-203ENST00000571739 ABCC10Q5T3U5 1492 aa14.1□□□□□ -0.15
TRAPPC1-203ENST00000571739 ATP10BO94823 1461 aa14.09□□□□□ -0.15
TRAPPC1-203ENST00000571739 ZCCHC11Q5TAX3 1644 aaKnown RBP14.07□□□□□ -0.16
TRAPPC1-203ENST00000571739 CLIP1P30622 1438 aa14.06□□□□□ -0.16
TRAPPC1-203ENST00000571739 RAPGEF6Q8TEU7 1601 aa14.05□□□□□ -0.16
TRAPPC1-203ENST00000571739 KCNH8Q96L42 1107 aa14.05□□□□□ -0.16
TRAPPC1-203ENST00000571739 KIF13AQ9H1H9 1805 aa14.05□□□□□ -0.16
TRAPPC1-203ENST00000571739 NUP153P49790 1475 aaKnown RBP14.05□□□□□ -0.16
TRAPPC1-203ENST00000571739 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.03□□□□□ -0.16
TRAPPC1-203ENST00000571739 HNRNPUL2Q1KMD3 747 aaKnown RBP14.03□□□□□ -0.16
TRAPPC1-203ENST00000571739 ATP1B4Q9UN42 357 aaPredicted RBP14.03□□□□□ -0.16
TRAPPC1-203ENST00000571739 FMN1Q68DA7 1419 aa14.03□□□□□ -0.16
TRAPPC1-203ENST00000571739 DIP2BQ9P265 1576 aa14.03□□□□□ -0.16
TRAPPC1-203ENST00000571739 EPRSP07814 1512 aaKnown RBP14.01□□□□□ -0.17
TRAPPC1-203ENST00000571739 WDR7Q9Y4E6 1490 aa14□□□□□ -0.17
TRAPPC1-203ENST00000571739 CEP162Q5TB80 1403 aa13.99□□□□□ -0.17
TRAPPC1-203ENST00000571739 PLEKHD1A6NEE1 506 aa13.99□□□□□ -0.17
TRAPPC1-203ENST00000571739 GLI2P10070 1586 aa13.98□□□□□ -0.17
TRAPPC1-203ENST00000571739 CASKIN1Q8WXD9 1431 aa13.95□□□□□ -0.18
TRAPPC1-203ENST00000571739 CDK13Q14004 1512 aaKnown RBP13.95□□□□□ -0.18
TRAPPC1-203ENST00000571739 TSPOAP1O95153 1857 aa13.93□□□□□ -0.18
TRAPPC1-203ENST00000571739 CD109Q6YHK3 1445 aa13.91□□□□□ -0.18
TRAPPC1-203ENST00000571739 HECW1Q76N89 1606 aa13.9□□□□□ -0.18
TRAPPC1-203ENST00000571739 MAP3K4Q9Y6R4 1608 aa13.9□□□□□ -0.18
TRAPPC1-203ENST00000571739 CDK11AQ9UQ88 783 aaPredicted RBP13.9□□□□□ -0.18
TRAPPC1-203ENST00000571739 PPRC1Q5VV67 1664 aaKnown RBP13.89□□□□□ -0.19
TRAPPC1-203ENST00000571739 PCF11O94913 1555 aaKnown RBP13.89□□□□□ -0.19
TRAPPC1-203ENST00000571739 LRRIQ1Q96JM4 1722 aa13.89□□□□□ -0.19
TRAPPC1-203ENST00000571739 FYCO1Q9BQS8 1478 aa13.87□□□□□ -0.19
TRAPPC1-203ENST00000571739 MAGI3Q5TCQ9 1506 aa13.86□□□□□ -0.19
TRAPPC1-203ENST00000571739 COL17A1Q9UMD9 1497 aaPredicted RBP13.86□□□□□ -0.19
TRAPPC1-203ENST00000571739 ABCA9Q8IUA7 1624 aa13.85□□□□□ -0.19
TRAPPC1-203ENST00000571739 CFAP43Q8NDM7 1665 aa13.85□□□□□ -0.19
TRAPPC1-203ENST00000571739 TROQ12816 1431 aaPredicted RBP13.84□□□□□ -0.19
TRAPPC1-203ENST00000571739 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.84□□□□□ -0.19
TRAPPC1-203ENST00000571739 CCDC18Q5T9S5 1454 aa13.83□□□□□ -0.2
TRAPPC1-203ENST00000571739 VPS8Q8N3P4 1428 aa13.82□□□□□ -0.2
TRAPPC1-203ENST00000571739 TEX14Q8IWB6 1497 aa13.81□□□□□ -0.2
TRAPPC1-203ENST00000571739 PLCH2O75038 1416 aa13.79□□□□□ -0.2
TRAPPC1-203ENST00000571739 TTC37Q6PGP7 1564 aa13.78□□□□□ -0.2
TRAPPC1-203ENST00000571739 KDM6BO15054 1643 aa13.78□□□□□ -0.2
TRAPPC1-203ENST00000571739 KIF14Q15058 1648 aa13.78□□□□□ -0.2
TRAPPC1-203ENST00000571739 PHLDB1Q86UU1 1377 aa13.76□□□□□ -0.21
TRAPPC1-203ENST00000571739 KANK4Q5T7N3 995 aaPredicted RBP13.76□□□□□ -0.21
TRAPPC1-203ENST00000571739 RAPGEF3O95398 923 aa13.75□□□□□ -0.21
TRAPPC1-203ENST00000571739 EFCAB2Q5VUJ9 269 aa13.75□□□□□ -0.21
TRAPPC1-203ENST00000571739 ARAP3Q8WWN8 1544 aa13.74□□□□□ -0.21
TRAPPC1-203ENST00000571739 NEO1Q92859 1461 aa13.74□□□□□ -0.21
TRAPPC1-203ENST00000571739 AKNAQ7Z591 1439 aa13.74□□□□□ -0.21
TRAPPC1-203ENST00000571739 MTUS2Q5JR59 1369 aa13.74□□□□□ -0.21
TRAPPC1-203ENST00000571739 FANCAO15360 1455 aa13.74□□□□□ -0.21
TRAPPC1-203ENST00000571739 GPATCH8Q9UKJ3 1502 aaKnown RBP13.7□□□□□ -0.22
TRAPPC1-203ENST00000571739 TIAM1Q13009 1591 aa13.7□□□□□ -0.22
TRAPPC1-203ENST00000571739 SCAPERQ9BY12 1400 aa13.69□□□□□ -0.22
TRAPPC1-203ENST00000571739 MAP3K1Q13233 1512 aa13.69□□□□□ -0.22
TRAPPC1-203ENST00000571739 LRRC9Q6ZRR7 1453 aa13.68□□□□□ -0.22
TRAPPC1-203ENST00000571739 CDC42BPBQ9Y5S2 1711 aa13.68□□□□□ -0.22
TRAPPC1-203ENST00000571739 MYO5CQ9NQX4 1742 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms