RNA–Protein interactions for RNA: ENST00000571245.5

ATP2A3-209, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3, humanhuman

TSL 2

Gene ATP2A3, Length 868 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3-209ENST00000571245 SHROOM2Q13796 1616 aa23.19■■□□□ 1.3
ATP2A3-209ENST00000571245 ERCC6L2Q5T890 1561 aa23.18■■□□□ 1.3
ATP2A3-209ENST00000571245 KIAA0586Q9BVV6 1533 aa23.13■■□□□ 1.29
ATP2A3-209ENST00000571245 RUSC2Q8N2Y8 1516 aa23.13■■□□□ 1.29
ATP2A3-209ENST00000571245 RAPGEF2Q9Y4G8 1499 aa23.03■■□□□ 1.28
ATP2A3-209ENST00000571245 NPM1P06748 294 aaKnown RBP eCLIP22.98■■□□□ 1.27
ATP2A3-209ENST00000571245 CARMIL2Q6F5E8 1435 aa22.96■■□□□ 1.27
ATP2A3-209ENST00000571245 TTBK1Q5TCY1 1321 aaPredicted RBP22.94■■□□□ 1.26
ATP2A3-209ENST00000571245 CHIC1Q5VXU3 224 aa22.94■■□□□ 1.26
ATP2A3-209ENST00000571245 IQGAP2Q13576 1575 aa22.93■■□□□ 1.26
ATP2A3-209ENST00000571245 PTPRGP23470 1445 aa22.91■■□□□ 1.26
ATP2A3-209ENST00000571245 TNIKQ9UKE5 1360 aa22.88■■□□□ 1.25
ATP2A3-209ENST00000571245 CSRNP3Q8WYN3 585 aa22.85■■□□□ 1.25
ATP2A3-209ENST00000571245 PRXQ9BXM0 1461 aa22.83■■□□□ 1.25
ATP2A3-209ENST00000571245 CTTNBP2Q8WZ74 1663 aa22.81■■□□□ 1.24
ATP2A3-209ENST00000571245 UGGT2Q9NYU1 1516 aa22.78■■□□□ 1.24
ATP2A3-209ENST00000571245 ADCY10Q96PN6 1610 aa22.78■■□□□ 1.24
ATP2A3-209ENST00000571245 DISP1Q96F81 1524 aa22.77■■□□□ 1.24
ATP2A3-209ENST00000571245 EEA1Q15075 1411 aa22.77■■□□□ 1.24
ATP2A3-209ENST00000571245 FAM9AQ8IZU1 332 aaPredicted RBP22.76■■□□□ 1.23
ATP2A3-209ENST00000571245 KIF13AQ9H1H9 1805 aa22.74■■□□□ 1.23
ATP2A3-209ENST00000571245 FAM69CQ0P6D2 419 aa22.74■■□□□ 1.23
ATP2A3-209ENST00000571245 GOLGA3Q08378 1498 aa22.72■■□□□ 1.23
ATP2A3-209ENST00000571245 MAPKBP1O60336 1514 aa22.72■■□□□ 1.23
ATP2A3-209ENST00000571245 UACAQ9BZF9 1416 aa22.71■■□□□ 1.23
ATP2A3-209ENST00000571245 KIAA0556O60303 1618 aa22.69■■□□□ 1.22
ATP2A3-209ENST00000571245 ABCC10Q5T3U5 1492 aa22.68■■□□□ 1.22
ATP2A3-209ENST00000571245 ABCC2Q92887 1545 aa22.67■■□□□ 1.22
ATP2A3-209ENST00000571245 UHRF1BP1LA0JNW5 1464 aa22.66■■□□□ 1.22
ATP2A3-209ENST00000571245 P3H3Q8IVL6 736 aa22.6■■□□□ 1.21
ATP2A3-209ENST00000571245 ASXL2Q76L83 1435 aa22.58■■□□□ 1.21
ATP2A3-209ENST00000571245 RANGAP1P46060 587 aaPredicted RBP22.58■■□□□ 1.21
ATP2A3-209ENST00000571245 PLB1Q6P1J6 1458 aa22.58■■□□□ 1.2
ATP2A3-209ENST00000571245 DIP2BQ9P265 1576 aa22.58■■□□□ 1.2
ATP2A3-209ENST00000571245 KDM5BQ9UGL1 1544 aa22.55■■□□□ 1.2
ATP2A3-209ENST00000571245 EHMT2Q96KQ7 1210 aa22.51■■□□□ 1.19
ATP2A3-209ENST00000571245 TSPOAP1O95153 1857 aa22.51■■□□□ 1.19
ATP2A3-209ENST00000571245 UBTFP17480 764 aaKnown RBP22.49■■□□□ 1.19
ATP2A3-209ENST00000571245 KIF21BO75037 1637 aa22.48■■□□□ 1.19
ATP2A3-209ENST00000571245 ZCCHC11Q5TAX3 1644 aaKnown RBP22.47■■□□□ 1.19
ATP2A3-209ENST00000571245 ABCA8O94911 1581 aa22.46■■□□□ 1.19
ATP2A3-209ENST00000571245 ARID3CA6NKF2 412 aa22.43■■□□□ 1.18
ATP2A3-209ENST00000571245 GLI2P10070 1586 aa22.42■■□□□ 1.18
ATP2A3-209ENST00000571245 SAMD9Q5K651 1589 aa22.42■■□□□ 1.18
ATP2A3-209ENST00000571245 EPRSP07814 1512 aaKnown RBP22.42■■□□□ 1.18
ATP2A3-209ENST00000571245 WDR7Q9Y4E6 1490 aa22.41■■□□□ 1.18
ATP2A3-209ENST00000571245 KCNH8Q96L42 1107 aa22.41■■□□□ 1.18
ATP2A3-209ENST00000571245 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.39■■□□□ 1.17
ATP2A3-209ENST00000571245 HNRNPUL2Q1KMD3 747 aaKnown RBP22.39■■□□□ 1.17
ATP2A3-209ENST00000571245 FHOD3Q2V2M9 1422 aa22.37■■□□□ 1.17
ATP2A3-209ENST00000571245 KDM6BO15054 1643 aa22.34■■□□□ 1.17
ATP2A3-209ENST00000571245 EFCAB5A4FU69 1503 aa22.33■■□□□ 1.17
ATP2A3-209ENST00000571245 AEBP2Q6ZN18 517 aaPredicted RBP22.32■■□□□ 1.16
ATP2A3-209ENST00000571245 ATP10BO94823 1461 aa22.32■■□□□ 1.16
ATP2A3-209ENST00000571245 TEX14Q8IWB6 1497 aa22.31■■□□□ 1.16
ATP2A3-209ENST00000571245 RAPGEF6Q8TEU7 1601 aa22.3■■□□□ 1.16
ATP2A3-209ENST00000571245 MAP3K4Q9Y6R4 1608 aa22.3■■□□□ 1.16
ATP2A3-209ENST00000571245 PPRC1Q5VV67 1664 aaKnown RBP22.3■■□□□ 1.16
ATP2A3-209ENST00000571245 CD109Q6YHK3 1445 aa22.28■■□□□ 1.16
ATP2A3-209ENST00000571245 CFAP43Q8NDM7 1665 aa22.23■■□□□ 1.15
ATP2A3-209ENST00000571245 NUP153P49790 1475 aaKnown RBP22.23■■□□□ 1.15
ATP2A3-209ENST00000571245 PLEKHD1A6NEE1 506 aa22.23■■□□□ 1.15
ATP2A3-209ENST00000571245 ATP1B4Q9UN42 357 aaPredicted RBP22.23■■□□□ 1.15
ATP2A3-209ENST00000571245 FMN1Q68DA7 1419 aa22.19■■□□□ 1.14
ATP2A3-209ENST00000571245 MAGI3Q5TCQ9 1506 aa22.19■■□□□ 1.14
ATP2A3-209ENST00000571245 ARHGAP35Q9NRY4 1499 aa22.17■■□□□ 1.14
ATP2A3-209ENST00000571245 COL17A1Q9UMD9 1497 aaPredicted RBP22.14■■□□□ 1.13
ATP2A3-209ENST00000571245 CDK11AQ9UQ88 783 aaPredicted RBP22.1■■□□□ 1.13
ATP2A3-209ENST00000571245 ABCA9Q8IUA7 1624 aa22.09■■□□□ 1.13
ATP2A3-209ENST00000571245 PHLDB1Q86UU1 1377 aa22.07■■□□□ 1.12
ATP2A3-209ENST00000571245 HECW1Q76N89 1606 aa22.06■■□□□ 1.12
ATP2A3-209ENST00000571245 CDK13Q14004 1512 aaKnown RBP22.05■■□□□ 1.12
ATP2A3-209ENST00000571245 LOC105371045A0A1W2PR82 267 aa22.03■■□□□ 1.12
ATP2A3-209ENST00000571245 CLIP1P30622 1438 aa22.01■■□□□ 1.11
ATP2A3-209ENST00000571245 NEO1Q92859 1461 aa22.01■■□□□ 1.11
ATP2A3-209ENST00000571245 ARAP3Q8WWN8 1544 aa22.01■■□□□ 1.11
ATP2A3-209ENST00000571245 KDM4FA0A1W2PPD8 638 aa22■■□□□ 1.11
ATP2A3-209ENST00000571245 RAPGEF3O95398 923 aa21.96■■□□□ 1.11
ATP2A3-209ENST00000571245 CASKIN1Q8WXD9 1431 aa21.96■■□□□ 1.11
ATP2A3-209ENST00000571245 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.96■■□□□ 1.11
ATP2A3-209ENST00000571245 FANCAO15360 1455 aa21.93■■□□□ 1.1
ATP2A3-209ENST00000571245 CFAP74Q9C0B2 1584 aa21.91■■□□□ 1.1
ATP2A3-209ENST00000571245 CCDC18Q5T9S5 1454 aa21.9■■□□□ 1.1
ATP2A3-209ENST00000571245 TROQ12816 1431 aaPredicted RBP21.9■■□□□ 1.1
ATP2A3-209ENST00000571245 AKNAQ7Z591 1439 aa21.9■■□□□ 1.1
ATP2A3-209ENST00000571245 TTC37Q6PGP7 1564 aa21.9■■□□□ 1.1
ATP2A3-209ENST00000571245 ADGRL1O94910 1474 aa21.89■■□□□ 1.09
ATP2A3-209ENST00000571245 PCF11O94913 1555 aaKnown RBP21.88■■□□□ 1.09
ATP2A3-209ENST00000571245 PLCH2O75038 1416 aa21.88■■□□□ 1.09
ATP2A3-209ENST00000571245 EFCAB2Q5VUJ9 269 aa21.87■■□□□ 1.09
ATP2A3-209ENST00000571245 DENND4BO75064 1496 aaPredicted RBP21.87■■□□□ 1.09
ATP2A3-209ENST00000571245 FYCO1Q9BQS8 1478 aa21.87■■□□□ 1.09
ATP2A3-209ENST00000571245 LRRIQ1Q96JM4 1722 aa21.86■■□□□ 1.09
ATP2A3-209ENST00000571245 KIF14Q15058 1648 aa21.85■■□□□ 1.09
ATP2A3-209ENST00000571245 MYO5CQ9NQX4 1742 aa21.83■■□□□ 1.08
ATP2A3-209ENST00000571245 CEP162Q5TB80 1403 aa21.82■■□□□ 1.08
ATP2A3-209ENST00000571245 SCAPERQ9BY12 1400 aa21.8■■□□□ 1.08
ATP2A3-209ENST00000571245 ARID4BQ4LE39 1312 aaPredicted RBP21.8■■□□□ 1.08
ATP2A3-209ENST00000571245 ARHGAP5Q13017 1502 aa21.77■■□□□ 1.08
ATP2A3-209ENST00000571245 RICTORQ6R327 1708 aa21.77■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms