RNA–Protein interactions for RNA: ENST00000570727.5

NDE1-203, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 4

Gene NDE1, Length 588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-203ENST00000570727 KIF27Q86VH2 1401 aa25.88■■□□□ 1.73
NDE1-203ENST00000570727 KIAA0586Q9BVV6 1533 aa25.8■■□□□ 1.72
NDE1-203ENST00000570727 CUL7Q14999 1698 aa25.8■■□□□ 1.72
NDE1-203ENST00000570727 CARMIL1Q5VZK9 1371 aa25.73■■□□□ 1.71
NDE1-203ENST00000570727 KIF13AQ9H1H9 1805 aa25.73■■□□□ 1.71
NDE1-203ENST00000570727 NPM1P06748 294 aaKnown RBP eCLIP25.67■■□□□ 1.7
NDE1-203ENST00000570727 ADCY10Q96PN6 1610 aa25.66■■□□□ 1.7
NDE1-203ENST00000570727 FAM69CQ0P6D2 419 aa25.61■■□□□ 1.69
NDE1-203ENST00000570727 MAPKBP1O60336 1514 aa25.61■■□□□ 1.69
NDE1-203ENST00000570727 ABCC10Q5T3U5 1492 aa25.6■■□□□ 1.69
NDE1-203ENST00000570727 PTPRGP23470 1445 aa25.57■■□□□ 1.68
NDE1-203ENST00000570727 AEBP2Q6ZN18 517 aaPredicted RBP25.54■■□□□ 1.68
NDE1-203ENST00000570727 DIP2BQ9P265 1576 aa25.52■■□□□ 1.68
NDE1-203ENST00000570727 TNIKQ9UKE5 1360 aa25.52■■□□□ 1.68
NDE1-203ENST00000570727 CARMIL2Q6F5E8 1435 aa25.52■■□□□ 1.68
NDE1-203ENST00000570727 IQGAP2Q13576 1575 aa25.52■■□□□ 1.68
NDE1-203ENST00000570727 TTBK1Q5TCY1 1321 aaPredicted RBP25.51■■□□□ 1.67
NDE1-203ENST00000570727 RAPGEF2Q9Y4G8 1499 aa25.47■■□□□ 1.67
NDE1-203ENST00000570727 DISP1Q96F81 1524 aa25.44■■□□□ 1.66
NDE1-203ENST00000570727 ABCC2Q92887 1545 aa25.41■■□□□ 1.66
NDE1-203ENST00000570727 TSPOAP1O95153 1857 aa25.38■■□□□ 1.65
NDE1-203ENST00000570727 UGGT2Q9NYU1 1516 aa25.38■■□□□ 1.65
NDE1-203ENST00000570727 UHRF1BP1LA0JNW5 1464 aa25.38■■□□□ 1.65
NDE1-203ENST00000570727 UACAQ9BZF9 1416 aa25.36■■□□□ 1.65
NDE1-203ENST00000570727 ASXL2Q76L83 1435 aa25.33■■□□□ 1.65
NDE1-203ENST00000570727 PLB1Q6P1J6 1458 aa25.3■■□□□ 1.64
NDE1-203ENST00000570727 KDM6BO15054 1643 aa25.29■■□□□ 1.64
NDE1-203ENST00000570727 KIAA0556O60303 1618 aa25.29■■□□□ 1.64
NDE1-203ENST00000570727 KDM5BQ9UGL1 1544 aa25.27■■□□□ 1.64
NDE1-203ENST00000570727 GLI2P10070 1586 aa25.26■■□□□ 1.63
NDE1-203ENST00000570727 CTTNBP2Q8WZ74 1663 aa25.24■■□□□ 1.63
NDE1-203ENST00000570727 PRXQ9BXM0 1461 aa25.23■■□□□ 1.63
NDE1-203ENST00000570727 PPRC1Q5VV67 1664 aaKnown RBP25.22■■□□□ 1.63
NDE1-203ENST00000570727 ZCCHC11Q5TAX3 1644 aaKnown RBP25.19■■□□□ 1.62
NDE1-203ENST00000570727 EPRSP07814 1512 aaKnown RBP25.18■■□□□ 1.62
NDE1-203ENST00000570727 GOLGA3Q08378 1498 aa25.15■■□□□ 1.62
NDE1-203ENST00000570727 KDM4FA0A1W2PPD8 638 aa25.14■■□□□ 1.62
NDE1-203ENST00000570727 MAP3K4Q9Y6R4 1608 aa25.12■■□□□ 1.61
NDE1-203ENST00000570727 ABCA8O94911 1581 aa25.09■■□□□ 1.61
NDE1-203ENST00000570727 COL17A1Q9UMD9 1497 aaPredicted RBP25.08■■□□□ 1.6
NDE1-203ENST00000570727 CSRNP3Q8WYN3 585 aa25.07■■□□□ 1.6
NDE1-203ENST00000570727 WDR7Q9Y4E6 1490 aa25.06■■□□□ 1.6
NDE1-203ENST00000570727 P3H3Q8IVL6 736 aa25.01■■□□□ 1.59
NDE1-203ENST00000570727 TEX14Q8IWB6 1497 aa25.01■■□□□ 1.59
NDE1-203ENST00000570727 KCNH8Q96L42 1107 aa25■■□□□ 1.59
NDE1-203ENST00000570727 CD109Q6YHK3 1445 aa24.94■■□□□ 1.58
NDE1-203ENST00000570727 MAGI3Q5TCQ9 1506 aa24.91■■□□□ 1.58
NDE1-203ENST00000570727 CFAP43Q8NDM7 1665 aa24.91■■□□□ 1.58
NDE1-203ENST00000570727 ATP10BO94823 1461 aa24.91■■□□□ 1.58
NDE1-203ENST00000570727 SAMD9Q5K651 1589 aa24.9■■□□□ 1.58
NDE1-203ENST00000570727 ARID3CA6NKF2 412 aa24.9■■□□□ 1.58
NDE1-203ENST00000570727 FAM9AQ8IZU1 332 aaPredicted RBP24.9■■□□□ 1.58
NDE1-203ENST00000570727 EEA1Q15075 1411 aa24.89■■□□□ 1.58
NDE1-203ENST00000570727 ADGRL1O94910 1474 aa24.85■■□□□ 1.57
NDE1-203ENST00000570727 RAPGEF6Q8TEU7 1601 aa24.8■■□□□ 1.56
NDE1-203ENST00000570727 RANGAP1P46060 587 aaPredicted RBP24.8■■□□□ 1.56
NDE1-203ENST00000570727 FHOD3Q2V2M9 1422 aa24.74■■□□□ 1.55
NDE1-203ENST00000570727 ABCA9Q8IUA7 1624 aa24.74■■□□□ 1.55
NDE1-203ENST00000570727 ARAP3Q8WWN8 1544 aa24.73■■□□□ 1.55
NDE1-203ENST00000570727 NUP153P49790 1475 aaKnown RBP24.73■■□□□ 1.55
NDE1-203ENST00000570727 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.72■■□□□ 1.55
NDE1-203ENST00000570727 HNRNPUL2Q1KMD3 747 aaKnown RBP24.72■■□□□ 1.55
NDE1-203ENST00000570727 KIF21BO75037 1637 aa24.7■■□□□ 1.54
NDE1-203ENST00000570727 PHLDB1Q86UU1 1377 aa24.67■■□□□ 1.54
NDE1-203ENST00000570727 PLEKHD1A6NEE1 506 aa24.62■■□□□ 1.53
NDE1-203ENST00000570727 CHIC1Q5VXU3 224 aa24.62■■□□□ 1.53
NDE1-203ENST00000570727 EFCAB5A4FU69 1503 aa24.61■■□□□ 1.53
NDE1-203ENST00000570727 RAPGEF3O95398 923 aa24.61■■□□□ 1.53
NDE1-203ENST00000570727 NEO1Q92859 1461 aa24.6■■□□□ 1.53
NDE1-203ENST00000570727 EHMT2Q96KQ7 1210 aa24.58■■□□□ 1.53
NDE1-203ENST00000570727 UBTFP17480 764 aaKnown RBP24.56■■□□□ 1.52
NDE1-203ENST00000570727 FRMPD1Q5SYB0 1578 aa24.51■■□□□ 1.51
NDE1-203ENST00000570727 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.51■■□□□ 1.51
NDE1-203ENST00000570727 HECW2Q9P2P5 1572 aa24.5■■□□□ 1.51
NDE1-203ENST00000570727 CDK13Q14004 1512 aaKnown RBP24.48■■□□□ 1.51
NDE1-203ENST00000570727 AKNAQ7Z591 1439 aa24.46■■□□□ 1.51
NDE1-203ENST00000570727 ARHGAP35Q9NRY4 1499 aa24.45■■□□□ 1.51
NDE1-203ENST00000570727 TTC37Q6PGP7 1564 aa24.45■■□□□ 1.5
NDE1-203ENST00000570727 FANCAO15360 1455 aa24.45■■□□□ 1.5
NDE1-203ENST00000570727 ADAMTSL3P82987 1691 aa24.44■■□□□ 1.5
NDE1-203ENST00000570727 RICTORQ6R327 1708 aa24.43■■□□□ 1.5
NDE1-203ENST00000570727 DENND4BO75064 1496 aaPredicted RBP24.43■■□□□ 1.5
NDE1-203ENST00000570727 ATP1B4Q9UN42 357 aaPredicted RBP24.42■■□□□ 1.5
NDE1-203ENST00000570727 FMN1Q68DA7 1419 aa24.42■■□□□ 1.5
NDE1-203ENST00000570727 CFAP74Q9C0B2 1584 aa24.39■■□□□ 1.5
NDE1-203ENST00000570727 BCORL1Q5H9F3 1711 aa24.38■■□□□ 1.49
NDE1-203ENST00000570727 PTPRMP28827 1452 aa24.38■■□□□ 1.49
NDE1-203ENST00000570727 ARID4BQ4LE39 1312 aaPredicted RBP24.36■■□□□ 1.49
NDE1-203ENST00000570727 PLCH2O75038 1416 aa24.36■■□□□ 1.49
NDE1-203ENST00000570727 HECW1Q76N89 1606 aa24.35■■□□□ 1.49
NDE1-203ENST00000570727 ILDR1Q86SU0 546 aaPredicted RBP24.34■■□□□ 1.49
NDE1-203ENST00000570727 ARHGEF40Q8TER5 1519 aa24.34■■□□□ 1.49
NDE1-203ENST00000570727 CDK11AQ9UQ88 783 aaPredicted RBP24.32■■□□□ 1.48
NDE1-203ENST00000570727 ZMYM4Q5VZL5 1548 aa24.31■■□□□ 1.48
NDE1-203ENST00000570727 SCAPERQ9BY12 1400 aa24.3■■□□□ 1.48
NDE1-203ENST00000570727 MADDQ8WXG6 1647 aa24.3■■□□□ 1.48
NDE1-203ENST00000570727 YEATS2Q9ULM3 1422 aa24.29■■□□□ 1.48
NDE1-203ENST00000570727 LRRIQ1Q96JM4 1722 aa24.29■■□□□ 1.48
NDE1-203ENST00000570727 EFCAB2Q5VUJ9 269 aa24.27■■□□□ 1.48
NDE1-203ENST00000570727 KIF14Q15058 1648 aa24.27■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms