RNA–Protein interactions for RNA: ENST00000570189.5

MAP1LC3B-208, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 1,259 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-208ENST00000570189 PRG4Q92954 1404 aaPredicted RBP29.57■■■□□ 2.32
MAP1LC3B-208ENST00000570189 JPH4Q96JJ6 628 aa29.56■■■□□ 2.32
MAP1LC3B-208ENST00000570189 CARMIL1Q5VZK9 1371 aa29.51■■■□□ 2.31
MAP1LC3B-208ENST00000570189 TRHP20396 242 aaPredicted RBP29.5■■■□□ 2.31
MAP1LC3B-208ENST00000570189 IQGAP2Q13576 1575 aa29.33■■■□□ 2.29
MAP1LC3B-208ENST00000570189 RAPGEF2Q9Y4G8 1499 aa29.32■■■□□ 2.28
MAP1LC3B-208ENST00000570189 ADCY10Q96PN6 1610 aa29.27■■■□□ 2.28
MAP1LC3B-208ENST00000570189 KIF13AQ9H1H9 1805 aa29.24■■■□□ 2.27
MAP1LC3B-208ENST00000570189 MAPKBP1O60336 1514 aa29.24■■■□□ 2.27
MAP1LC3B-208ENST00000570189 CARMIL2Q6F5E8 1435 aa29.22■■■□□ 2.27
MAP1LC3B-208ENST00000570189 UGGT2Q9NYU1 1516 aa29.19■■■□□ 2.26
MAP1LC3B-208ENST00000570189 TNIKQ9UKE5 1360 aa29.16■■■□□ 2.26
MAP1LC3B-208ENST00000570189 CTTNBP2Q8WZ74 1663 aa29.15■■■□□ 2.26
MAP1LC3B-208ENST00000570189 DISP1Q96F81 1524 aa29.15■■■□□ 2.26
MAP1LC3B-208ENST00000570189 PTPRGP23470 1445 aa29.15■■■□□ 2.26
MAP1LC3B-208ENST00000570189 PRXQ9BXM0 1461 aa29.14■■■□□ 2.26
MAP1LC3B-208ENST00000570189 ABCC10Q5T3U5 1492 aa29.1■■■□□ 2.25
MAP1LC3B-208ENST00000570189 NPM1P06748 294 aaKnown RBP eCLIP29.1■■■□□ 2.25
MAP1LC3B-208ENST00000570189 UHRF1BP1LA0JNW5 1464 aa29.07■■■□□ 2.24
MAP1LC3B-208ENST00000570189 KIAA0556O60303 1618 aa29.07■■■□□ 2.24
MAP1LC3B-208ENST00000570189 DIP2BQ9P265 1576 aa29.06■■■□□ 2.24
MAP1LC3B-208ENST00000570189 ABCC2Q92887 1545 aa29.04■■■□□ 2.24
MAP1LC3B-208ENST00000570189 UACAQ9BZF9 1416 aa28.98■■■□□ 2.23
MAP1LC3B-208ENST00000570189 EEA1Q15075 1411 aa28.95■■■□□ 2.23
MAP1LC3B-208ENST00000570189 GOLGA3Q08378 1498 aa28.95■■■□□ 2.22
MAP1LC3B-208ENST00000570189 FAM69CQ0P6D2 419 aa28.92■■■□□ 2.22
MAP1LC3B-208ENST00000570189 KDM5BQ9UGL1 1544 aa28.92■■■□□ 2.22
MAP1LC3B-208ENST00000570189 PLB1Q6P1J6 1458 aa28.88■■■□□ 2.21
MAP1LC3B-208ENST00000570189 CSRNP3Q8WYN3 585 aa28.87■■■□□ 2.21
MAP1LC3B-208ENST00000570189 GLI2P10070 1586 aa28.86■■■□□ 2.21
MAP1LC3B-208ENST00000570189 ASXL2Q76L83 1435 aa28.85■■■□□ 2.21
MAP1LC3B-208ENST00000570189 TTBK1Q5TCY1 1321 aaPredicted RBP28.82■■■□□ 2.2
MAP1LC3B-208ENST00000570189 ZCCHC11Q5TAX3 1644 aaKnown RBP28.82■■■□□ 2.2
MAP1LC3B-208ENST00000570189 ABCA8O94911 1581 aa28.79■■■□□ 2.2
MAP1LC3B-208ENST00000570189 TSPOAP1O95153 1857 aa28.76■■■□□ 2.19
MAP1LC3B-208ENST00000570189 SAMD9Q5K651 1589 aa28.75■■■□□ 2.19
MAP1LC3B-208ENST00000570189 PPRC1Q5VV67 1664 aaKnown RBP28.72■■■□□ 2.19
MAP1LC3B-208ENST00000570189 KIF21BO75037 1637 aa28.71■■■□□ 2.19
MAP1LC3B-208ENST00000570189 EPRSP07814 1512 aaKnown RBP28.7■■■□□ 2.19
MAP1LC3B-208ENST00000570189 MAP3K4Q9Y6R4 1608 aa28.69■■■□□ 2.18
MAP1LC3B-208ENST00000570189 KDM6BO15054 1643 aa28.69■■■□□ 2.18
MAP1LC3B-208ENST00000570189 WDR7Q9Y4E6 1490 aa28.66■■■□□ 2.18
MAP1LC3B-208ENST00000570189 CHIC1Q5VXU3 224 aa28.58■■■□□ 2.17
MAP1LC3B-208ENST00000570189 FAM9AQ8IZU1 332 aaPredicted RBP28.55■■■□□ 2.16
MAP1LC3B-208ENST00000570189 CFAP43Q8NDM7 1665 aa28.54■■■□□ 2.16
MAP1LC3B-208ENST00000570189 TEX14Q8IWB6 1497 aa28.54■■■□□ 2.16
MAP1LC3B-208ENST00000570189 RAPGEF6Q8TEU7 1601 aa28.53■■■□□ 2.16
MAP1LC3B-208ENST00000570189 EFCAB5A4FU69 1503 aa28.52■■■□□ 2.16
MAP1LC3B-208ENST00000570189 ATP10BO94823 1461 aa28.48■■■□□ 2.15
MAP1LC3B-208ENST00000570189 P3H3Q8IVL6 736 aa28.46■■■□□ 2.15
MAP1LC3B-208ENST00000570189 MAGI3Q5TCQ9 1506 aa28.46■■■□□ 2.15
MAP1LC3B-208ENST00000570189 FHOD3Q2V2M9 1422 aa28.4■■■□□ 2.14
MAP1LC3B-208ENST00000570189 NUP153P49790 1475 aaKnown RBP28.4■■■□□ 2.14
MAP1LC3B-208ENST00000570189 COL17A1Q9UMD9 1497 aaPredicted RBP28.4■■■□□ 2.14
MAP1LC3B-208ENST00000570189 CD109Q6YHK3 1445 aa28.39■■■□□ 2.14
MAP1LC3B-208ENST00000570189 AEBP2Q6ZN18 517 aaPredicted RBP28.39■■■□□ 2.14
MAP1LC3B-208ENST00000570189 ABCA9Q8IUA7 1624 aa28.37■■■□□ 2.13
MAP1LC3B-208ENST00000570189 KCNH8Q96L42 1107 aa28.31■■■□□ 2.12
MAP1LC3B-208ENST00000570189 ARAP3Q8WWN8 1544 aa28.24■■■□□ 2.11
MAP1LC3B-208ENST00000570189 ARID3CA6NKF2 412 aa28.23■■■□□ 2.11
MAP1LC3B-208ENST00000570189 UBTFP17480 764 aaKnown RBP28.23■■■□□ 2.11
MAP1LC3B-208ENST00000570189 RANGAP1P46060 587 aaPredicted RBP28.23■■■□□ 2.11
MAP1LC3B-208ENST00000570189 PHLDB1Q86UU1 1377 aa28.23■■■□□ 2.11
MAP1LC3B-208ENST00000570189 ARHGAP35Q9NRY4 1499 aa28.22■■■□□ 2.11
MAP1LC3B-208ENST00000570189 FMN1Q68DA7 1419 aa28.21■■■□□ 2.11
MAP1LC3B-208ENST00000570189 NEO1Q92859 1461 aa28.17■■■□□ 2.1
MAP1LC3B-208ENST00000570189 KDM4FA0A1W2PPD8 638 aa28.17■■■□□ 2.1
MAP1LC3B-208ENST00000570189 HECW1Q76N89 1606 aa28.15■■■□□ 2.1
MAP1LC3B-208ENST00000570189 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.13■■■□□ 2.09
MAP1LC3B-208ENST00000570189 HNRNPUL2Q1KMD3 747 aaKnown RBP28.13■■■□□ 2.09
MAP1LC3B-208ENST00000570189 PLEKHD1A6NEE1 506 aa28.12■■■□□ 2.09
MAP1LC3B-208ENST00000570189 CDK13Q14004 1512 aaKnown RBP28.08■■■□□ 2.09
MAP1LC3B-208ENST00000570189 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.08■■■□□ 2.092e-6■■■■□ 19.9
MAP1LC3B-208ENST00000570189 ADGRL1O94910 1474 aa28.08■■■□□ 2.09
MAP1LC3B-208ENST00000570189 CFAP74Q9C0B2 1584 aa28.06■■■□□ 2.08
MAP1LC3B-208ENST00000570189 TTC37Q6PGP7 1564 aa28.04■■■□□ 2.08
MAP1LC3B-208ENST00000570189 EHMT2Q96KQ7 1210 aa28.03■■■□□ 2.08
MAP1LC3B-208ENST00000570189 FRMPD1Q5SYB0 1578 aa28.01■■■□□ 2.07
MAP1LC3B-208ENST00000570189 LRRIQ1Q96JM4 1722 aa28.01■■■□□ 2.07
MAP1LC3B-208ENST00000570189 RICTORQ6R327 1708 aa27.96■■■□□ 2.07
MAP1LC3B-208ENST00000570189 FANCAO15360 1455 aa27.95■■■□□ 2.07
MAP1LC3B-208ENST00000570189 AKNAQ7Z591 1439 aa27.93■■■□□ 2.06
MAP1LC3B-208ENST00000570189 CASKIN1Q8WXD9 1431 aa27.93■■■□□ 2.06
MAP1LC3B-208ENST00000570189 CDK11AQ9UQ88 783 aaPredicted RBP27.93■■■□□ 2.06
MAP1LC3B-208ENST00000570189 PCF11O94913 1555 aaKnown RBP27.91■■■□□ 2.06
MAP1LC3B-208ENST00000570189 MYO5CQ9NQX4 1742 aa27.91■■■□□ 2.06
MAP1LC3B-208ENST00000570189 PLCH2O75038 1416 aa27.91■■■□□ 2.06
MAP1LC3B-208ENST00000570189 CCDC18Q5T9S5 1454 aa27.9■■■□□ 2.06
MAP1LC3B-208ENST00000570189 KIF14Q15058 1648 aa27.9■■■□□ 2.06
MAP1LC3B-208ENST00000570189 TROQ12816 1431 aaPredicted RBP27.9■■■□□ 2.06
MAP1LC3B-208ENST00000570189 DENND4BO75064 1496 aaPredicted RBP27.89■■■□□ 2.06
MAP1LC3B-208ENST00000570189 ZMYM4Q5VZL5 1548 aa27.88■■■□□ 2.05
MAP1LC3B-208ENST00000570189 RAPGEF3O95398 923 aa27.88■■■□□ 2.05
MAP1LC3B-208ENST00000570189 FYCO1Q9BQS8 1478 aa27.86■■■□□ 2.05
MAP1LC3B-208ENST00000570189 ARHGEF40Q8TER5 1519 aa27.86■■■□□ 2.05
MAP1LC3B-208ENST00000570189 CLIP1P30622 1438 aa27.85■■■□□ 2.05
MAP1LC3B-208ENST00000570189 ATP1B4Q9UN42 357 aaPredicted RBP27.82■■■□□ 2.04
MAP1LC3B-208ENST00000570189 ADAMTSL3P82987 1691 aa27.8■■■□□ 2.04
MAP1LC3B-208ENST00000570189 MAGI2Q86UL8 1455 aa27.79■■■□□ 2.04
MAP1LC3B-208ENST00000570189 POGZQ7Z3K3 1410 aa27.76■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms