RNA–Protein interactions for RNA: ENST00000569506.1

NEIL1-223, Transcript of nei like DNA glycosylase 1, humanhuman

TSL 3

Gene NEIL1, Length 593 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL1-223ENST00000569506 KIF21BO75037 1637 aa26.5■■□□□ 1.83
NEIL1-223ENST00000569506 GOLGA3Q08378 1498 aa26.45■■□□□ 1.82
NEIL1-223ENST00000569506 RAPGEF2Q9Y4G8 1499 aa26.44■■□□□ 1.82
NEIL1-223ENST00000569506 LOC105371045A0A1W2PR82 267 aa26.44■■□□□ 1.82
NEIL1-223ENST00000569506 FHAD1B1AJZ9 1412 aa26.43■■□□□ 1.82
NEIL1-223ENST00000569506 ADAMTS12P58397 1594 aa26.4■■□□□ 1.82
NEIL1-223ENST00000569506 EHMT2Q96KQ7 1210 aa26.37■■□□□ 1.81
NEIL1-223ENST00000569506 UBTFP17480 764 aaKnown RBP26.32■■□□□ 1.8
NEIL1-223ENST00000569506 GRIN2AQ12879 1464 aa26.3■■□□□ 1.8
NEIL1-223ENST00000569506 ERCC6L2Q5T890 1561 aa26.3■■□□□ 1.8
NEIL1-223ENST00000569506 TNIKQ9UKE5 1360 aa26.28■■□□□ 1.8
NEIL1-223ENST00000569506 CEP170Q5SW79 1584 aa26.25■■□□□ 1.79
NEIL1-223ENST00000569506 NUP160Q12769 1436 aa26.24■■□□□ 1.79
NEIL1-223ENST00000569506 SHROOM2Q13796 1616 aa26.21■■□□□ 1.79
NEIL1-223ENST00000569506 KIF13AQ9H1H9 1805 aa26.13■■□□□ 1.77
NEIL1-223ENST00000569506 CTTNBP2Q8WZ74 1663 aa26.09■■□□□ 1.77
NEIL1-223ENST00000569506 KIAA0586Q9BVV6 1533 aa26.05■■□□□ 1.76
NEIL1-223ENST00000569506 CEP162Q5TB80 1403 aa26.05■■□□□ 1.76
NEIL1-223ENST00000569506 IQGAP2Q13576 1575 aa25.99■■□□□ 1.75
NEIL1-223ENST00000569506 CLIP1P30622 1438 aa25.98■■□□□ 1.75
NEIL1-223ENST00000569506 PRG4Q92954 1404 aaPredicted RBP25.98■■□□□ 1.75
NEIL1-223ENST00000569506 RANGAP1P46060 587 aaPredicted RBP25.95■■□□□ 1.74
NEIL1-223ENST00000569506 ABCC10Q5T3U5 1492 aa25.91■■□□□ 1.74
NEIL1-223ENST00000569506 JPH4Q96JJ6 628 aa25.9■■□□□ 1.74
NEIL1-223ENST00000569506 MAPKBP1O60336 1514 aa25.89■■□□□ 1.74
NEIL1-223ENST00000569506 UGGT2Q9NYU1 1516 aa25.89■■□□□ 1.74
NEIL1-223ENST00000569506 EFCAB5A4FU69 1503 aa25.88■■□□□ 1.73
NEIL1-223ENST00000569506 ARHGAP35Q9NRY4 1499 aa25.85■■□□□ 1.73
NEIL1-223ENST00000569506 DIP2BQ9P265 1576 aa25.85■■□□□ 1.73
NEIL1-223ENST00000569506 FAM69CQ0P6D2 419 aa25.84■■□□□ 1.73
NEIL1-223ENST00000569506 SAMD9Q5K651 1589 aa25.82■■□□□ 1.72
NEIL1-223ENST00000569506 NPM1P06748 294 aaKnown RBP eCLIP25.81■■□□□ 1.72
NEIL1-223ENST00000569506 ADCY10Q96PN6 1610 aa25.81■■□□□ 1.72
NEIL1-223ENST00000569506 CARMIL2Q6F5E8 1435 aa25.77■■□□□ 1.72
NEIL1-223ENST00000569506 DISP1Q96F81 1524 aa25.76■■□□□ 1.71
NEIL1-223ENST00000569506 KDM6BO15054 1643 aa25.76■■□□□ 1.71
NEIL1-223ENST00000569506 P3H3Q8IVL6 736 aa25.75■■□□□ 1.71
NEIL1-223ENST00000569506 KIAA0556O60303 1618 aa25.74■■□□□ 1.71
NEIL1-223ENST00000569506 FHOD3Q2V2M9 1422 aa25.71■■□□□ 1.71
NEIL1-223ENST00000569506 VPS8Q8N3P4 1428 aa25.7■■□□□ 1.7
NEIL1-223ENST00000569506 TSPOAP1O95153 1857 aa25.66■■□□□ 1.7
NEIL1-223ENST00000569506 FMN1Q68DA7 1419 aa25.65■■□□□ 1.7
NEIL1-223ENST00000569506 KDM4FA0A1W2PPD8 638 aa25.65■■□□□ 1.7
NEIL1-223ENST00000569506 PTPRGP23470 1445 aa25.54■■□□□ 1.68
NEIL1-223ENST00000569506 CASKIN1Q8WXD9 1431 aa25.53■■□□□ 1.68
NEIL1-223ENST00000569506 TTBK1Q5TCY1 1321 aaPredicted RBP25.5■■□□□ 1.67
NEIL1-223ENST00000569506 FYCO1Q9BQS8 1478 aa25.5■■□□□ 1.67
NEIL1-223ENST00000569506 ABCC2Q92887 1545 aa25.49■■□□□ 1.67
NEIL1-223ENST00000569506 PCF11O94913 1555 aaKnown RBP25.48■■□□□ 1.67
NEIL1-223ENST00000569506 GLI2P10070 1586 aa25.47■■□□□ 1.67
NEIL1-223ENST00000569506 PPRC1Q5VV67 1664 aaKnown RBP25.46■■□□□ 1.67
NEIL1-223ENST00000569506 APLP2Q06481 763 aa25.46■■□□□ 1.67
NEIL1-223ENST00000569506 PLB1Q6P1J6 1458 aa25.44■■□□□ 1.66
NEIL1-223ENST00000569506 ATP1B4Q9UN42 357 aaPredicted RBP25.43■■□□□ 1.66
NEIL1-223ENST00000569506 RAPGEF6Q8TEU7 1601 aa25.42■■□□□ 1.66
NEIL1-223ENST00000569506 ASXL2Q76L83 1435 aa25.42■■□□□ 1.66
NEIL1-223ENST00000569506 HECW1Q76N89 1606 aa25.41■■□□□ 1.66
NEIL1-223ENST00000569506 ABCA8O94911 1581 aa25.41■■□□□ 1.66
NEIL1-223ENST00000569506 UACAQ9BZF9 1416 aa25.39■■□□□ 1.66
NEIL1-223ENST00000569506 ILDR1Q86SU0 546 aaPredicted RBP25.39■■□□□ 1.66
NEIL1-223ENST00000569506 UHRF1BP1LA0JNW5 1464 aa25.39■■□□□ 1.65
NEIL1-223ENST00000569506 ADGRL1O94910 1474 aa25.38■■□□□ 1.65
NEIL1-223ENST00000569506 MAP3K1Q13233 1512 aa25.37■■□□□ 1.65
NEIL1-223ENST00000569506 CCDC18Q5T9S5 1454 aa25.34■■□□□ 1.65
NEIL1-223ENST00000569506 NUP153P49790 1475 aaKnown RBP25.34■■□□□ 1.65
NEIL1-223ENST00000569506 EPRSP07814 1512 aaKnown RBP25.32■■□□□ 1.64
NEIL1-223ENST00000569506 MAP3K4Q9Y6R4 1608 aa25.31■■□□□ 1.64
NEIL1-223ENST00000569506 TIAM1Q13009 1591 aa25.31■■□□□ 1.64
NEIL1-223ENST00000569506 CFAP43Q8NDM7 1665 aa25.28■■□□□ 1.64
NEIL1-223ENST00000569506 KDM5BQ9UGL1 1544 aa25.27■■□□□ 1.64
NEIL1-223ENST00000569506 TEX14Q8IWB6 1497 aa25.27■■□□□ 1.64
NEIL1-223ENST00000569506 COL17A1Q9UMD9 1497 aaPredicted RBP25.27■■□□□ 1.64
NEIL1-223ENST00000569506 LRRIQ1Q96JM4 1722 aa25.26■■□□□ 1.63
NEIL1-223ENST00000569506 ZCCHC11Q5TAX3 1644 aaKnown RBP25.23■■□□□ 1.63
NEIL1-223ENST00000569506 CDK13Q14004 1512 aaKnown RBP25.22■■□□□ 1.63
NEIL1-223ENST00000569506 ARID3CA6NKF2 412 aa25.22■■□□□ 1.63
NEIL1-223ENST00000569506 ATP10BO94823 1461 aa25.21■■□□□ 1.63
NEIL1-223ENST00000569506 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.21■■□□□ 1.63
NEIL1-223ENST00000569506 HNRNPUL2Q1KMD3 747 aaKnown RBP25.21■■□□□ 1.63
NEIL1-223ENST00000569506 KANK4Q5T7N3 995 aaPredicted RBP25.21■■□□□ 1.63
NEIL1-223ENST00000569506 CDK11AQ9UQ88 783 aaPredicted RBP25.21■■□□□ 1.63
NEIL1-223ENST00000569506 HECW2Q9P2P5 1572 aa25.21■■□□□ 1.63
NEIL1-223ENST00000569506 LRRC9Q6ZRR7 1453 aa25.21■■□□□ 1.63
NEIL1-223ENST00000569506 PPARGC1BQ86YN6 1023 aaKnown RBP25.19■■□□□ 1.62
NEIL1-223ENST00000569506 MTUS2Q5JR59 1369 aa25.17■■□□□ 1.62
NEIL1-223ENST00000569506 EHBP1L1Q8N3D4 1523 aa25.12■■□□□ 1.61
NEIL1-223ENST00000569506 PLEKHD1A6NEE1 506 aa25.12■■□□□ 1.61
NEIL1-223ENST00000569506 WDR7Q9Y4E6 1490 aa25.11■■□□□ 1.61
NEIL1-223ENST00000569506 MAGI3Q5TCQ9 1506 aa25.1■■□□□ 1.61
NEIL1-223ENST00000569506 TROQ12816 1431 aaPredicted RBP25.08■■□□□ 1.61
NEIL1-223ENST00000569506 SUPT6HQ7KZ85 1726 aaKnown RBP25.03■■□□□ 1.6
NEIL1-223ENST00000569506 CD109Q6YHK3 1445 aa24.99■■□□□ 1.59
NEIL1-223ENST00000569506 NCOA2Q15596 1464 aa24.98■■□□□ 1.59
NEIL1-223ENST00000569506 KIF14Q15058 1648 aa24.94■■□□□ 1.58
NEIL1-223ENST00000569506 PHLDB1Q86UU1 1377 aa24.93■■□□□ 1.58
NEIL1-223ENST00000569506 TRIM26Q12899 539 aaPredicted RBP24.92■■□□□ 1.58
NEIL1-223ENST00000569506 KCNH8Q96L42 1107 aa24.89■■□□□ 1.58
NEIL1-223ENST00000569506 CCNB3Q8WWL7 1395 aa24.89■■□□□ 1.57
NEIL1-223ENST00000569506 MYOM3Q5VTT5 1437 aa24.87■■□□□ 1.57
NEIL1-223ENST00000569506 ARAP3Q8WWN8 1544 aa24.86■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms