RNA–Protein interactions for RNA: ENST00000569476.2

LINC00559-201, long intergenic non-protein coding RNA 559, humanhuman

TSL 1 (best) BASIC

Gene LINC00559, Length 3,867 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00559-201ENST00000569476 CCER1Q8TC90 406 aaPredicted RBP11.86□□□□□ -0.51
LINC00559-201ENST00000569476 CASKIN1Q8WXD9 1431 aa11.86□□□□□ -0.51
LINC00559-201ENST00000569476 NESP48681 1621 aa11.86□□□□□ -0.51
LINC00559-201ENST00000569476 PBRM1Q86U86 1689 aa11.86□□□□□ -0.51
LINC00559-201ENST00000569476 FMN1Q68DA7 1419 aa11.84□□□□□ -0.51
LINC00559-201ENST00000569476 GAPVD1Q14C86 1478 aa11.84□□□□□ -0.51
LINC00559-201ENST00000569476 WDR62O43379 1518 aa11.84□□□□□ -0.51
LINC00559-201ENST00000569476 RAD54L2Q9Y4B4 1467 aa11.84□□□□□ -0.51
LINC00559-201ENST00000569476 LRRC9Q6ZRR7 1453 aa11.83□□□□□ -0.52
LINC00559-201ENST00000569476 PCF11O94913 1555 aaKnown RBP11.82□□□□□ -0.52
LINC00559-201ENST00000569476 ADAMTS12P58397 1594 aa11.81□□□□□ -0.52
LINC00559-201ENST00000569476 IFT140Q96RY7 1462 aa11.81□□□□□ -0.52
LINC00559-201ENST00000569476 CCNB3Q8WWL7 1395 aa11.79□□□□□ -0.52
LINC00559-201ENST00000569476 CCDC18Q5T9S5 1454 aa11.77□□□□□ -0.52
LINC00559-201ENST00000569476 SNAPC4Q5SXM2 1469 aa11.77□□□□□ -0.53
LINC00559-201ENST00000569476 GRIN2BQ13224 1484 aa11.76□□□□□ -0.53
LINC00559-201ENST00000569476 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.75□□□□□ -0.53
LINC00559-201ENST00000569476 EHBP1L1Q8N3D4 1523 aa11.75□□□□□ -0.53
LINC00559-201ENST00000569476 UGGT2Q9NYU1 1516 aa11.74□□□□□ -0.53
LINC00559-201ENST00000569476 HECW1Q76N89 1606 aa11.73□□□□□ -0.53
LINC00559-201ENST00000569476 ACIN1Q9UKV3 1341 aaKnown RBP11.73□□□□□ -0.53
LINC00559-201ENST00000569476 IQGAP2Q13576 1575 aa11.73□□□□□ -0.53
LINC00559-201ENST00000569476 SUPT6HQ7KZ85 1726 aaKnown RBP11.7□□□□□ -0.54
LINC00559-201ENST00000569476 ARHGEF11O15085 1522 aa11.7□□□□□ -0.54
LINC00559-201ENST00000569476 DHX57Q6P158 1386 aaKnown RBP11.69□□□□□ -0.54
LINC00559-201ENST00000569476 KANK4Q5T7N3 995 aaPredicted RBP11.68□□□□□ -0.54
LINC00559-201ENST00000569476 MAGI1Q96QZ7 1491 aaPredicted RBP11.68□□□□□ -0.54
LINC00559-201ENST00000569476 FHOD3Q2V2M9 1422 aa11.67□□□□□ -0.54
LINC00559-201ENST00000569476 TCOF1Q13428 1488 aaKnown RBP11.65□□□□□ -0.54
LINC00559-201ENST00000569476 SETD5Q9C0A6 1442 aa11.65□□□□□ -0.54
LINC00559-201ENST00000569476 KIAA0586Q9BVV6 1533 aa11.65□□□□□ -0.54
LINC00559-201ENST00000569476 AKNAQ7Z591 1439 aa11.65□□□□□ -0.54
LINC00559-201ENST00000569476 ZNF316A6NFI3 1004 aaPredicted RBP11.65□□□□□ -0.54
LINC00559-201ENST00000569476 TIMELESSQ9UNS1 1208 aa11.65□□□□□ -0.54
LINC00559-201ENST00000569476 LRRIQ1Q96JM4 1722 aa11.64□□□□□ -0.55
LINC00559-201ENST00000569476 TDRD9Q8NDG6 1382 aaKnown RBP11.63□□□□□ -0.55
LINC00559-201ENST00000569476 EIF4G3O43432 1585 aaKnown RBP11.62□□□□□ -0.55
LINC00559-201ENST00000569476 FGD6Q6ZV73 1430 aa11.62□□□□□ -0.55
LINC00559-201ENST00000569476 PHLDB1Q86UU1 1377 aa11.62□□□□□ -0.55
LINC00559-201ENST00000569476 HNRNPUL2Q1KMD3 747 aaKnown RBP11.61□□□□□ -0.55
LINC00559-201ENST00000569476 KIAA0556O60303 1618 aa11.61□□□□□ -0.55
LINC00559-201ENST00000569476 MYOM3Q5VTT5 1437 aa11.6□□□□□ -0.55
LINC00559-201ENST00000569476 MIA2Q96PC5 1412 aa11.6□□□□□ -0.55
LINC00559-201ENST00000569476 GCC2Q8IWJ2 1684 aa11.59□□□□□ -0.55
LINC00559-201ENST00000569476 GRIN2AQ12879 1464 aa11.59□□□□□ -0.55
LINC00559-201ENST00000569476 NCOA2Q15596 1464 aa11.58□□□□□ -0.56
LINC00559-201ENST00000569476 SYNJ2O15056 1496 aa11.57□□□□□ -0.56
LINC00559-201ENST00000569476 ADCY10Q96PN6 1610 aa11.57□□□□□ -0.56
LINC00559-201ENST00000569476 TTBK1Q5TCY1 1321 aaPredicted RBP11.57□□□□□ -0.56
LINC00559-201ENST00000569476 PTPN23Q9H3S7 1636 aa11.57□□□□□ -0.56
LINC00559-201ENST00000569476 MAPKBP1O60336 1514 aa11.56□□□□□ -0.56
LINC00559-201ENST00000569476 HFM1A2PYH4 1435 aa11.56□□□□□ -0.56
LINC00559-201ENST00000569476 RAB3GAP2Q9H2M9 1393 aa11.56□□□□□ -0.56
LINC00559-201ENST00000569476 DIEXFQ68CQ4 756 aaKnown RBP11.56□□□□□ -0.56
LINC00559-201ENST00000569476 MTUS2Q5JR59 1369 aa11.56□□□□□ -0.56
LINC00559-201ENST00000569476 EPRSP07814 1512 aaKnown RBP11.56□□□□□ -0.56
LINC00559-201ENST00000569476 RAPGEF6Q8TEU7 1601 aa11.55□□□□□ -0.56
LINC00559-201ENST00000569476 RANGAP1P46060 587 aaPredicted RBP11.55□□□□□ -0.56
LINC00559-201ENST00000569476 NUP160Q12769 1436 aa11.54□□□□□ -0.56
LINC00559-201ENST00000569476 DISP1Q96F81 1524 aa11.53□□□□□ -0.56
LINC00559-201ENST00000569476 ERCC6Q03468 1493 aa11.52□□□□□ -0.56
LINC00559-201ENST00000569476 ITSN2Q9NZM3 1697 aa11.52□□□□□ -0.57
LINC00559-201ENST00000569476 UACAQ9BZF9 1416 aa11.5□□□□□ -0.57
LINC00559-201ENST00000569476 ZNF608Q9ULD9 1512 aaPredicted RBP11.49□□□□□ -0.57
LINC00559-201ENST00000569476 ROCK1Q13464 1354 aa11.49□□□□□ -0.57
LINC00559-201ENST00000569476 CEP170Q5SW79 1584 aa11.49□□□□□ -0.57
LINC00559-201ENST00000569476 MAGI3Q5TCQ9 1506 aa11.49□□□□□ -0.57
LINC00559-201ENST00000569476 CENPBP07199 599 aaPredicted RBP11.48□□□□□ -0.57
LINC00559-201ENST00000569476 DNMT1P26358 1616 aaKnown RBP11.47□□□□□ -0.57
LINC00559-201ENST00000569476 CARMIL2Q6F5E8 1435 aa11.47□□□□□ -0.57
LINC00559-201ENST00000569476 ADGBQ8N7X0 1667 aa11.45□□□□□ -0.58
LINC00559-201ENST00000569476 NUP153P49790 1475 aaKnown RBP11.44□□□□□ -0.58
LINC00559-201ENST00000569476 NAIPQ13075 1403 aa11.44□□□□□ -0.58
LINC00559-201ENST00000569476 ABCA8O94911 1581 aa11.44□□□□□ -0.58
LINC00559-201ENST00000569476 DNAJC5BQ9UF47 199 aa11.44□□□□□ -0.58
LINC00559-201ENST00000569476 CDK11AQ9UQ88 783 aaPredicted RBP11.43□□□□□ -0.58
LINC00559-201ENST00000569476 CROCC2H7BZ55 1655 aa11.42□□□□□ -0.58
LINC00559-201ENST00000569476 TROQ12816 1431 aaPredicted RBP11.42□□□□□ -0.58
LINC00559-201ENST00000569476 P3H3Q8IVL6 736 aa11.42□□□□□ -0.58
LINC00559-201ENST00000569476 SHROOM2Q13796 1616 aa11.41□□□□□ -0.58
LINC00559-201ENST00000569476 ADGRL2O95490 1459 aa11.41□□□□□ -0.58
LINC00559-201ENST00000569476 FAM50AQ14320 339 aaKnown RBP11.41□□□□□ -0.58
LINC00559-201ENST00000569476 SHANK2Q9UPX8 1470 aa11.4□□□□□ -0.58
LINC00559-201ENST00000569476 CDK13Q14004 1512 aaKnown RBP11.39□□□□□ -0.59
LINC00559-201ENST00000569476 PTPRKQ15262 1439 aa11.38□□□□□ -0.59
LINC00559-201ENST00000569476 KIF14Q15058 1648 aa11.37□□□□□ -0.59
LINC00559-201ENST00000569476 DAPK1P53355 1430 aa11.36□□□□□ -0.59
LINC00559-201ENST00000569476 ARHGEF5Q12774 1597 aa11.36□□□□□ -0.59
LINC00559-201ENST00000569476 ATP1B4Q9UN42 357 aaPredicted RBP11.34□□□□□ -0.59
LINC00559-201ENST00000569476 KDM5DQ9BY66 1539 aa11.33□□□□□ -0.6
LINC00559-201ENST00000569476 CHMP7Q8WUX9 453 aaPredicted RBP11.32□□□□□ -0.6
LINC00559-201ENST00000569476 ABCC10Q5T3U5 1492 aa11.32□□□□□ -0.6
LINC00559-201ENST00000569476 CAMSAP2Q08AD1 1489 aa11.31□□□□□ -0.6
LINC00559-201ENST00000569476 ABCC5O15440 1437 aa11.31□□□□□ -0.6
LINC00559-201ENST00000569476 MAST1Q9Y2H9 1570 aa11.31□□□□□ -0.6
LINC00559-201ENST00000569476 PPP1R15AO75807 674 aaPredicted RBP11.3□□□□□ -0.6
LINC00559-201ENST00000569476 GPATCH8Q9UKJ3 1502 aaKnown RBP11.3□□□□□ -0.6
LINC00559-201ENST00000569476 KDM5BQ9UGL1 1544 aa11.3□□□□□ -0.6
LINC00559-201ENST00000569476 CDC42BPAQ5VT25 1732 aa11.29□□□□□ -0.6
LINC00559-201ENST00000569476 CHD1O14646 1710 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 289.7 ms