RNA–Protein interactions for RNA: ENST00000569455.1

CDH13-214, Transcript of cadherin 13, humanhuman

TSL 3

Gene CDH13, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-214ENST00000569455 CHMP7Q8WUX9 453 aaPredicted RBP12.27□□□□□ -0.45
CDH13-214ENST00000569455 EHMT2Q96KQ7 1210 aa12.27□□□□□ -0.45
CDH13-214ENST00000569455 CLASP1Q7Z460 1538 aa12.27□□□□□ -0.45
CDH13-214ENST00000569455 IGF1RP08069 1367 aa12.26□□□□□ -0.45
CDH13-214ENST00000569455 PRXQ9BXM0 1461 aa12.26□□□□□ -0.45
CDH13-214ENST00000569455 ADAMTS12P58397 1594 aa12.26□□□□□ -0.45
CDH13-214ENST00000569455 UBTFP17480 764 aaKnown RBP12.24□□□□□ -0.45
CDH13-214ENST00000569455 TNIKQ9UKE5 1360 aa12.24□□□□□ -0.45
CDH13-214ENST00000569455 RAPGEF2Q9Y4G8 1499 aa12.22□□□□□ -0.45
CDH13-214ENST00000569455 GRIN2AQ12879 1464 aa12.21□□□□□ -0.45
CDH13-214ENST00000569455 CARMIL1Q5VZK9 1371 aa12.19□□□□□ -0.46
CDH13-214ENST00000569455 NUP160Q12769 1436 aa12.17□□□□□ -0.46
CDH13-214ENST00000569455 CEP162Q5TB80 1403 aa12.16□□□□□ -0.46
CDH13-214ENST00000569455 CEP170Q5SW79 1584 aa12.12□□□□□ -0.47
CDH13-214ENST00000569455 KIAA0586Q9BVV6 1533 aa12.11□□□□□ -0.47
CDH13-214ENST00000569455 CLIP1P30622 1438 aa12.1□□□□□ -0.47
CDH13-214ENST00000569455 CTTNBP2Q8WZ74 1663 aa12.1□□□□□ -0.47
CDH13-214ENST00000569455 KIF13AQ9H1H9 1805 aa12.09□□□□□ -0.47
CDH13-214ENST00000569455 SHROOM2Q13796 1616 aa12.08□□□□□ -0.48
CDH13-214ENST00000569455 JPH4Q96JJ6 628 aa12.04□□□□□ -0.48
CDH13-214ENST00000569455 KDM4FA0A1W2PPD8 638 aa12.03□□□□□ -0.48
CDH13-214ENST00000569455 IQGAP2Q13576 1575 aa12.03□□□□□ -0.48
CDH13-214ENST00000569455 RANGAP1P46060 587 aaPredicted RBP12□□□□□ -0.49
CDH13-214ENST00000569455 ERCC6L2Q5T890 1561 aa12□□□□□ -0.49
CDH13-214ENST00000569455 EFCAB5A4FU69 1503 aa11.99□□□□□ -0.49
CDH13-214ENST00000569455 UGGT2Q9NYU1 1516 aa11.99□□□□□ -0.49
CDH13-214ENST00000569455 CARMIL2Q6F5E8 1435 aa11.98□□□□□ -0.49
CDH13-214ENST00000569455 VPS8Q8N3P4 1428 aa11.98□□□□□ -0.49
CDH13-214ENST00000569455 PRG4Q92954 1404 aaPredicted RBP11.98□□□□□ -0.49
CDH13-214ENST00000569455 ARHGAP35Q9NRY4 1499 aa11.97□□□□□ -0.49
CDH13-214ENST00000569455 KDM6BO15054 1643 aa11.96□□□□□ -0.5
CDH13-214ENST00000569455 SAMD9Q5K651 1589 aa11.92□□□□□ -0.5
CDH13-214ENST00000569455 ABCC10Q5T3U5 1492 aa11.92□□□□□ -0.5
CDH13-214ENST00000569455 DISP1Q96F81 1524 aa11.91□□□□□ -0.5
CDH13-214ENST00000569455 APLP2Q06481 763 aa11.91□□□□□ -0.5
CDH13-214ENST00000569455 KIAA0556O60303 1618 aa11.89□□□□□ -0.51
CDH13-214ENST00000569455 DIP2BQ9P265 1576 aa11.89□□□□□ -0.51
CDH13-214ENST00000569455 HECW2Q9P2P5 1572 aa11.89□□□□□ -0.51
CDH13-214ENST00000569455 FAM69CQ0P6D2 419 aa11.89□□□□□ -0.51
CDH13-214ENST00000569455 PTPRGP23470 1445 aa11.88□□□□□ -0.51
CDH13-214ENST00000569455 MAPKBP1O60336 1514 aa11.87□□□□□ -0.51
CDH13-214ENST00000569455 FHOD3Q2V2M9 1422 aa11.86□□□□□ -0.51
CDH13-214ENST00000569455 FMN1Q68DA7 1419 aa11.86□□□□□ -0.51
CDH13-214ENST00000569455 P3H3Q8IVL6 736 aa11.85□□□□□ -0.51
CDH13-214ENST00000569455 ADGRL1O94910 1474 aa11.84□□□□□ -0.51
CDH13-214ENST00000569455 TRIM26Q12899 539 aaPredicted RBP11.84□□□□□ -0.51
CDH13-214ENST00000569455 UHRF1BP1LA0JNW5 1464 aa11.83□□□□□ -0.52
CDH13-214ENST00000569455 PCF11O94913 1555 aaKnown RBP11.83□□□□□ -0.52
CDH13-214ENST00000569455 FYCO1Q9BQS8 1478 aa11.83□□□□□ -0.52
CDH13-214ENST00000569455 FBXO41Q8TF61 875 aa11.82□□□□□ -0.52
CDH13-214ENST00000569455 CASKIN1Q8WXD9 1431 aa11.82□□□□□ -0.52
CDH13-214ENST00000569455 TSPOAP1O95153 1857 aa11.82□□□□□ -0.52
CDH13-214ENST00000569455 MAP3K1Q13233 1512 aa11.81□□□□□ -0.52
CDH13-214ENST00000569455 UACAQ9BZF9 1416 aa11.81□□□□□ -0.52
CDH13-214ENST00000569455 NPM1P06748 294 aaKnown RBP eCLIP11.8□□□□□ -0.52
CDH13-214ENST00000569455 PPARGC1BQ86YN6 1023 aaKnown RBP11.8□□□□□ -0.52
CDH13-214ENST00000569455 CFAP43Q8NDM7 1665 aa11.79□□□□□ -0.52
CDH13-214ENST00000569455 ABCC2Q92887 1545 aa11.79□□□□□ -0.52
CDH13-214ENST00000569455 TIAM1Q13009 1591 aa11.79□□□□□ -0.52
CDH13-214ENST00000569455 ADCY10Q96PN6 1610 aa11.78□□□□□ -0.52
CDH13-214ENST00000569455 PCGF6Q9BYE7 350 aa11.78□□□□□ -0.52
CDH13-214ENST00000569455 ABCA8O94911 1581 aa11.77□□□□□ -0.53
CDH13-214ENST00000569455 HECW1Q76N89 1606 aa11.77□□□□□ -0.53
CDH13-214ENST00000569455 KDM5BQ9UGL1 1544 aa11.76□□□□□ -0.53
CDH13-214ENST00000569455 ATP1B4Q9UN42 357 aaPredicted RBP11.75□□□□□ -0.53
CDH13-214ENST00000569455 CCDC18Q5T9S5 1454 aa11.73□□□□□ -0.53
CDH13-214ENST00000569455 TTBK1Q5TCY1 1321 aaPredicted RBP11.73□□□□□ -0.53
CDH13-214ENST00000569455 PLB1Q6P1J6 1458 aa11.73□□□□□ -0.53
CDH13-214ENST00000569455 RAPGEF6Q8TEU7 1601 aa11.73□□□□□ -0.53
CDH13-214ENST00000569455 LMTK3Q96Q04 1460 aa11.72□□□□□ -0.53
CDH13-214ENST00000569455 LRRIQ1Q96JM4 1722 aa11.72□□□□□ -0.53
CDH13-214ENST00000569455 LRRC9Q6ZRR7 1453 aa11.71□□□□□ -0.53
CDH13-214ENST00000569455 ZCCHC11Q5TAX3 1644 aaKnown RBP11.69□□□□□ -0.54
CDH13-214ENST00000569455 KANK4Q5T7N3 995 aaPredicted RBP11.69□□□□□ -0.54
CDH13-214ENST00000569455 EPRSP07814 1512 aaKnown RBP11.68□□□□□ -0.54
CDH13-214ENST00000569455 PPRC1Q5VV67 1664 aaKnown RBP11.68□□□□□ -0.54
CDH13-214ENST00000569455 NUP153P49790 1475 aaKnown RBP11.67□□□□□ -0.54
CDH13-214ENST00000569455 EHBP1L1Q8N3D4 1523 aa11.66□□□□□ -0.54
CDH13-214ENST00000569455 ATP10BO94823 1461 aa11.66□□□□□ -0.54
CDH13-214ENST00000569455 MTUS2Q5JR59 1369 aa11.66□□□□□ -0.54
CDH13-214ENST00000569455 ASXL2Q76L83 1435 aa11.65□□□□□ -0.54
CDH13-214ENST00000569455 SUPT6HQ7KZ85 1726 aaKnown RBP11.65□□□□□ -0.54
CDH13-214ENST00000569455 GLI2P10070 1586 aa11.64□□□□□ -0.55
CDH13-214ENST00000569455 CDK11AQ9UQ88 783 aaPredicted RBP11.64□□□□□ -0.55
CDH13-214ENST00000569455 WDR7Q9Y4E6 1490 aa11.63□□□□□ -0.55
CDH13-214ENST00000569455 CDK13Q14004 1512 aaKnown RBP11.63□□□□□ -0.55
CDH13-214ENST00000569455 PLEKHD1A6NEE1 506 aa11.61□□□□□ -0.55
CDH13-214ENST00000569455 SOCS7O14512 581 aa11.61□□□□□ -0.55
CDH13-214ENST00000569455 RRBP1Q9P2E9 1410 aaKnown RBP11.6□□□□□ -0.55
CDH13-214ENST00000569455 COL17A1Q9UMD9 1497 aaPredicted RBP11.6□□□□□ -0.55
CDH13-214ENST00000569455 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.6□□□□□ -0.55
CDH13-214ENST00000569455 HNRNPUL2Q1KMD3 747 aaKnown RBP11.6□□□□□ -0.55
CDH13-214ENST00000569455 NCOA2Q15596 1464 aa11.58□□□□□ -0.56
CDH13-214ENST00000569455 CCNB3Q8WWL7 1395 aa11.58□□□□□ -0.56
CDH13-214ENST00000569455 MAGI3Q5TCQ9 1506 aa11.58□□□□□ -0.56
CDH13-214ENST00000569455 ARID3CA6NKF2 412 aa11.57□□□□□ -0.56
CDH13-214ENST00000569455 TEX14Q8IWB6 1497 aa11.57□□□□□ -0.56
CDH13-214ENST00000569455 PHLDB1Q86UU1 1377 aa11.56□□□□□ -0.56
CDH13-214ENST00000569455 MAP3K4Q9Y6R4 1608 aa11.56□□□□□ -0.56
CDH13-214ENST00000569455 TROQ12816 1431 aaPredicted RBP11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms