RNA–Protein interactions for RNA: ENST00000569418.5

CYLD-214, Transcript of CYLD lysine 63 deubiquitinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CYLD, Length 3,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYLD-214ENST00000569418 SNAPC4Q5SXM2 1469 aa20.26■□□□□ 0.83
CYLD-214ENST00000569418 PCGF6Q9BYE7 350 aa20.22■□□□□ 0.83
CYLD-214ENST00000569418 ARID3CA6NKF2 412 aa20.21■□□□□ 0.83
CYLD-214ENST00000569418 ADAMTS12P58397 1594 aa20.2■□□□□ 0.82
CYLD-214ENST00000569418 APLP2Q06481 763 aa20.17■□□□□ 0.82
CYLD-214ENST00000569418 ARHGAP35Q9NRY4 1499 aa20.17■□□□□ 0.82
CYLD-214ENST00000569418 VPS8Q8N3P4 1428 aa20.16■□□□□ 0.82
CYLD-214ENST00000569418 ARAP1Q96P48 1450 aa20.15■□□□□ 0.82
CYLD-214ENST00000569418 MAGI1Q96QZ7 1491 aaPredicted RBP20.13■□□□□ 0.81
CYLD-214ENST00000569418 GRIN2AQ12879 1464 aa20.1■□□□□ 0.81
CYLD-214ENST00000569418 CTTNBP2Q8WZ74 1663 aa20.09■□□□□ 0.81
CYLD-214ENST00000569418 SYNJ2O15056 1496 aa20.09■□□□□ 0.81
CYLD-214ENST00000569418 TRIM26Q12899 539 aaPredicted RBP20.09■□□□□ 0.81
CYLD-214ENST00000569418 FHOD3Q2V2M9 1422 aa20.08■□□□□ 0.81
CYLD-214ENST00000569418 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.02■□□□□ 0.79
CYLD-214ENST00000569418 HNRNPUL2Q1KMD3 747 aaKnown RBP20.02■□□□□ 0.79
CYLD-214ENST00000569418 IQGAP2Q13576 1575 aa20■□□□□ 0.79
CYLD-214ENST00000569418 KIAA0586Q9BVV6 1533 aa19.98■□□□□ 0.79
CYLD-214ENST00000569418 JPH4Q96JJ6 628 aa19.98■□□□□ 0.79
CYLD-214ENST00000569418 EFCAB5A4FU69 1503 aa19.96■□□□□ 0.79
CYLD-214ENST00000569418 CEP170Q5SW79 1584 aa19.94■□□□□ 0.78
CYLD-214ENST00000569418 KANK4Q5T7N3 995 aaPredicted RBP19.93■□□□□ 0.78
CYLD-214ENST00000569418 NUP160Q12769 1436 aa19.91■□□□□ 0.78
CYLD-214ENST00000569418 FMN1Q68DA7 1419 aa19.89■□□□□ 0.77
CYLD-214ENST00000569418 SAMD9Q5K651 1589 aa19.88■□□□□ 0.77
CYLD-214ENST00000569418 CHD1O14646 1710 aa19.87■□□□□ 0.77
CYLD-214ENST00000569418 UGGT2Q9NYU1 1516 aa19.85■□□□□ 0.77
CYLD-214ENST00000569418 PCF11O94913 1555 aaKnown RBP19.85■□□□□ 0.77
CYLD-214ENST00000569418 OSCARQ8IYS5 282 aa19.82■□□□□ 0.76
CYLD-214ENST00000569418 DISP1Q96F81 1524 aa19.82■□□□□ 0.76
CYLD-214ENST00000569418 CASKIN1Q8WXD9 1431 aa19.81■□□□□ 0.76
CYLD-214ENST00000569418 ITGAEP38570 1179 aa19.81■□□□□ 0.76
CYLD-214ENST00000569418 CARMIL2Q6F5E8 1435 aa19.8■□□□□ 0.76
CYLD-214ENST00000569418 FYCO1Q9BQS8 1478 aa19.78■□□□□ 0.76
CYLD-214ENST00000569418 KIAA0556O60303 1618 aa19.78■□□□□ 0.76
CYLD-214ENST00000569418 PRG4Q92954 1404 aaPredicted RBP19.76■□□□□ 0.75
CYLD-214ENST00000569418 TIAM1Q13009 1591 aa19.74■□□□□ 0.75
CYLD-214ENST00000569418 MTUS2Q5JR59 1369 aa19.7■□□□□ 0.74
CYLD-214ENST00000569418 LRRC9Q6ZRR7 1453 aa19.7■□□□□ 0.74
CYLD-214ENST00000569418 PLB1Q6P1J6 1458 aa19.67■□□□□ 0.74
CYLD-214ENST00000569418 MAP3K1Q13233 1512 aa19.66■□□□□ 0.74
CYLD-214ENST00000569418 PTPRGP23470 1445 aa19.65■□□□□ 0.74
CYLD-214ENST00000569418 FAM50AQ14320 339 aaKnown RBP19.64■□□□□ 0.73
CYLD-214ENST00000569418 CDK13Q14004 1512 aaKnown RBP19.63■□□□□ 0.73
CYLD-214ENST00000569418 HECW1Q76N89 1606 aa19.63■□□□□ 0.73
CYLD-214ENST00000569418 KCNH8Q96L42 1107 aa19.62■□□□□ 0.73
CYLD-214ENST00000569418 EPRSP07814 1512 aaKnown RBP19.62■□□□□ 0.73
CYLD-214ENST00000569418 CFAP43Q8NDM7 1665 aa19.62■□□□□ 0.73
CYLD-214ENST00000569418 ERCC6L2Q5T890 1561 aa19.61■□□□□ 0.73
CYLD-214ENST00000569418 CYB5RLQ6IPT4 315 aa19.59■□□□□ 0.73
CYLD-214ENST00000569418 LRRIQ1Q96JM4 1722 aa19.59■□□□□ 0.73
CYLD-214ENST00000569418 NUP153P49790 1475 aaKnown RBP19.58■□□□□ 0.73
CYLD-214ENST00000569418 CCDC18Q5T9S5 1454 aa19.58■□□□□ 0.73
CYLD-214ENST00000569418 RAPGEF6Q8TEU7 1601 aa19.58■□□□□ 0.73
CYLD-214ENST00000569418 PHLDB1Q86UU1 1377 aa19.58■□□□□ 0.73
CYLD-214ENST00000569418 CLASP1Q7Z460 1538 aa19.58■□□□□ 0.73
CYLD-214ENST00000569418 CDK11AQ9UQ88 783 aaPredicted RBP19.56■□□□□ 0.72
CYLD-214ENST00000569418 SHROOM2Q13796 1616 aa19.55■□□□□ 0.72
CYLD-214ENST00000569418 ZNF777Q9ULD5 760 aaPredicted RBP19.54■□□□□ 0.72
CYLD-214ENST00000569418 CCNB3Q8WWL7 1395 aa19.54■□□□□ 0.72
CYLD-214ENST00000569418 MAGI3Q5TCQ9 1506 aa19.52■□□□□ 0.71
CYLD-214ENST00000569418 PLEKHD1A6NEE1 506 aa19.51■□□□□ 0.71
CYLD-214ENST00000569418 NCOA2Q15596 1464 aa19.49■□□□□ 0.71
CYLD-214ENST00000569418 RRBP1Q9P2E9 1410 aaKnown RBP19.49■□□□□ 0.71
CYLD-214ENST00000569418 EHBP1L1Q8N3D4 1523 aa19.48■□□□□ 0.71
CYLD-214ENST00000569418 UACAQ9BZF9 1416 aa19.48■□□□□ 0.71
CYLD-214ENST00000569418 ABCA8O94911 1581 aa19.47■□□□□ 0.71
CYLD-214ENST00000569418 ATP10BO94823 1461 aa19.45■□□□□ 0.7
CYLD-214ENST00000569418 NPM1P06748 294 aaKnown RBP eCLIP19.44■□□□□ 0.7
CYLD-214ENST00000569418 SUPT6HQ7KZ85 1726 aaKnown RBP19.43■□□□□ 0.7
CYLD-214ENST00000569418 CCER1Q8TC90 406 aaPredicted RBP19.43■□□□□ 0.7
CYLD-214ENST00000569418 HRCP23327 699 aa19.42■□□□□ 0.7
CYLD-214ENST00000569418 CHIC2Q9UKJ5 165 aa19.42■□□□□ 0.7
CYLD-214ENST00000569418 FGD6Q6ZV73 1430 aa19.4■□□□□ 0.7
CYLD-214ENST00000569418 TROQ12816 1431 aaPredicted RBP19.4■□□□□ 0.7
CYLD-214ENST00000569418 MYOM3Q5VTT5 1437 aa19.4■□□□□ 0.7
CYLD-214ENST00000569418 ABCC2Q92887 1545 aa19.35■□□□□ 0.69
CYLD-214ENST00000569418 ZNF644Q9H582 1327 aaPredicted RBP19.35■□□□□ 0.69
CYLD-214ENST00000569418 CFDP1Q9UEE9 299 aaPredicted RBP19.33■□□□□ 0.69
CYLD-214ENST00000569418 ARHGEF11O15085 1522 aa19.31■□□□□ 0.68
CYLD-214ENST00000569418 KIF14Q15058 1648 aa19.3■□□□□ 0.68
CYLD-214ENST00000569418 MYT1LQ9UL68 1186 aa19.27■□□□□ 0.68
CYLD-214ENST00000569418 RRP7BPQ9NSQ0 103 aa19.27■□□□□ 0.68
CYLD-214ENST00000569418 PTPN23Q9H3S7 1636 aa19.26■□□□□ 0.67
CYLD-214ENST00000569418 UHRF1BP1LA0JNW5 1464 aa19.25■□□□□ 0.67
CYLD-214ENST00000569418 MIA2Q96PC5 1412 aa19.24■□□□□ 0.67
CYLD-214ENST00000569418 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.24■□□□□ 0.67
CYLD-214ENST00000569418 GPATCH8Q9UKJ3 1502 aaKnown RBP19.23■□□□□ 0.67
CYLD-214ENST00000569418 KDM5BQ9UGL1 1544 aa19.22■□□□□ 0.67
CYLD-214ENST00000569418 ZCCHC11Q5TAX3 1644 aaKnown RBP19.21■□□□□ 0.67
CYLD-214ENST00000569418 ADCY10Q96PN6 1610 aa19.21■□□□□ 0.67
CYLD-214ENST00000569418 HNRNPMP52272 730 aaKnown RBP eCLIP19.21■□□□□ 0.67
CYLD-214ENST00000569418 PTPRKQ15262 1439 aa19.21■□□□□ 0.67
CYLD-214ENST00000569418 RAB3GAP2Q9H2M9 1393 aa19.19■□□□□ 0.66
CYLD-214ENST00000569418 ZEB1P37275 1124 aaPredicted RBP19.18■□□□□ 0.66
CYLD-214ENST00000569418 ABCC10Q5T3U5 1492 aa19.18■□□□□ 0.66
CYLD-214ENST00000569418 SETD5Q9C0A6 1442 aa19.17■□□□□ 0.66
CYLD-214ENST00000569418 TCOF1Q13428 1488 aaKnown RBP19.16■□□□□ 0.66
CYLD-214ENST00000569418 CAMSAP2Q08AD1 1489 aa19.13■□□□□ 0.65
CYLD-214ENST00000569418 ITSN2Q9NZM3 1697 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms