RNA–Protein interactions for RNA: ENST00000569093.1

CCNF-205, Transcript of cyclin F, humanhuman

TSL 2

Gene CCNF, Length 857 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-205ENST00000569093 RUSC2Q8N2Y8 1516 aa43.27■■■■■ 4.52
CCNF-205ENST00000569093 PRG4Q92954 1404 aaPredicted RBP43.22■■■■■ 4.51
CCNF-205ENST00000569093 TRHP20396 242 aaPredicted RBP43.14■■■■■ 4.5
CCNF-205ENST00000569093 KIAA0586Q9BVV6 1533 aa43.13■■■■■ 4.5
CCNF-205ENST00000569093 RAPGEF2Q9Y4G8 1499 aa42.94■■■■■ 4.46
CCNF-205ENST00000569093 IQGAP2Q13576 1575 aa42.82■■■■■ 4.44
CCNF-205ENST00000569093 TTBK1Q5TCY1 1321 aaPredicted RBP42.68■■■■■ 4.42
CCNF-205ENST00000569093 CARMIL2Q6F5E8 1435 aa42.67■■■■■ 4.42
CCNF-205ENST00000569093 PRXQ9BXM0 1461 aa42.67■■■■■ 4.42
CCNF-205ENST00000569093 PTPRGP23470 1445 aa42.63■■■■■ 4.42
CCNF-205ENST00000569093 ADCY10Q96PN6 1610 aa42.62■■■■■ 4.41
CCNF-205ENST00000569093 TNIKQ9UKE5 1360 aa42.6■■■■■ 4.41
CCNF-205ENST00000569093 DISP1Q96F81 1524 aa42.59■■■■■ 4.41
CCNF-205ENST00000569093 NPM1P06748 294 aaKnown RBP eCLIP42.57■■■■■ 4.41
CCNF-205ENST00000569093 UGGT2Q9NYU1 1516 aa42.56■■■■■ 4.4
CCNF-205ENST00000569093 CSRNP3Q8WYN3 585 aa42.56■■■■■ 4.4
CCNF-205ENST00000569093 CTTNBP2Q8WZ74 1663 aa42.55■■■■■ 4.4
CCNF-205ENST00000569093 CHIC1Q5VXU3 224 aa42.43■■■■■ 4.38
CCNF-205ENST00000569093 FAM9AQ8IZU1 332 aaPredicted RBP42.43■■■■■ 4.38
CCNF-205ENST00000569093 KIAA0556O60303 1618 aa42.42■■■■■ 4.38
CCNF-205ENST00000569093 KIF13AQ9H1H9 1805 aa42.4■■■■■ 4.38
CCNF-205ENST00000569093 EEA1Q15075 1411 aa42.39■■■■■ 4.38
CCNF-205ENST00000569093 MAPKBP1O60336 1514 aa42.39■■■■■ 4.38
CCNF-205ENST00000569093 UACAQ9BZF9 1416 aa42.31■■■■■ 4.36
CCNF-205ENST00000569093 ABCC10Q5T3U5 1492 aa42.3■■■■■ 4.36
CCNF-205ENST00000569093 FAM69CQ0P6D2 419 aa42.29■■■■■ 4.36
CCNF-205ENST00000569093 ABCC2Q92887 1545 aa42.29■■■■■ 4.36
CCNF-205ENST00000569093 UHRF1BP1LA0JNW5 1464 aa42.27■■■■■ 4.36
CCNF-205ENST00000569093 GOLGA3Q08378 1498 aa42.26■■■■■ 4.36
CCNF-205ENST00000569093 DIP2BQ9P265 1576 aa42.21■■■■■ 4.35
CCNF-205ENST00000569093 P3H3Q8IVL6 736 aa42.12■■■■■ 4.33
CCNF-205ENST00000569093 PLB1Q6P1J6 1458 aa42.11■■■■■ 4.33
CCNF-205ENST00000569093 ASXL2Q76L83 1435 aa42.1■■■■■ 4.33
CCNF-205ENST00000569093 KDM5BQ9UGL1 1544 aa42.1■■■■■ 4.33
CCNF-205ENST00000569093 KIF21BO75037 1637 aa42.05■■■■■ 4.32
CCNF-205ENST00000569093 ZCCHC11Q5TAX3 1644 aaKnown RBP42.03■■■■■ 4.32
CCNF-205ENST00000569093 RANGAP1P46060 587 aaPredicted RBP42.02■■■■■ 4.32
CCNF-205ENST00000569093 ABCA8O94911 1581 aa42.01■■■■■ 4.32
CCNF-205ENST00000569093 SAMD9Q5K651 1589 aa41.97■■■■■ 4.31
CCNF-205ENST00000569093 EHMT2Q96KQ7 1210 aa41.97■■■■■ 4.31
CCNF-205ENST00000569093 TSPOAP1O95153 1857 aa41.96■■■■■ 4.31
CCNF-205ENST00000569093 GLI2P10070 1586 aa41.86■■■■■ 4.29
CCNF-205ENST00000569093 EPRSP07814 1512 aaKnown RBP41.84■■■■■ 4.29
CCNF-205ENST00000569093 ARID3CA6NKF2 412 aa41.8■■■■■ 4.28
CCNF-205ENST00000569093 UBTFP17480 764 aaKnown RBP41.8■■■■■ 4.28
CCNF-205ENST00000569093 WDR7Q9Y4E6 1490 aa41.77■■■■■ 4.28
CCNF-205ENST00000569093 FHOD3Q2V2M9 1422 aa41.77■■■■■ 4.28
CCNF-205ENST00000569093 PPRC1Q5VV67 1664 aaKnown RBP41.72■■■■■ 4.27
CCNF-205ENST00000569093 ATP10BO94823 1461 aa41.7■■■■■ 4.27
CCNF-205ENST00000569093 KCNH8Q96L42 1107 aa41.69■■■■■ 4.26
CCNF-205ENST00000569093 RAPGEF6Q8TEU7 1601 aa41.69■■■■■ 4.26
CCNF-205ENST00000569093 MAP3K4Q9Y6R4 1608 aa41.68■■■■■ 4.26
CCNF-205ENST00000569093 KDM6BO15054 1643 aa41.67■■■■■ 4.26
CCNF-205ENST00000569093 EFCAB5A4FU69 1503 aa41.64■■■■■ 4.26
CCNF-205ENST00000569093 NUP153P49790 1475 aaKnown RBP41.55■■■■■ 4.24
CCNF-205ENST00000569093 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP41.53■■■■■ 4.24
CCNF-205ENST00000569093 HNRNPUL2Q1KMD3 747 aaKnown RBP41.53■■■■■ 4.24
CCNF-205ENST00000569093 CD109Q6YHK3 1445 aa41.48■■■■■ 4.23
CCNF-205ENST00000569093 TEX14Q8IWB6 1497 aa41.47■■■■■ 4.23
CCNF-205ENST00000569093 CFAP43Q8NDM7 1665 aa41.46■■■■■ 4.23
CCNF-205ENST00000569093 ARHGAP35Q9NRY4 1499 aa41.46■■■■■ 4.23
CCNF-205ENST00000569093 COL17A1Q9UMD9 1497 aaPredicted RBP41.42■■■■■ 4.22
CCNF-205ENST00000569093 MAGI3Q5TCQ9 1506 aa41.38■■■■■ 4.21
CCNF-205ENST00000569093 AEBP2Q6ZN18 517 aaPredicted RBP41.3■■■■■ 4.2
CCNF-205ENST00000569093 FMN1Q68DA7 1419 aa41.29■■■■■ 4.2
CCNF-205ENST00000569093 ABCA9Q8IUA7 1624 aa41.29■■■■■ 4.2
CCNF-205ENST00000569093 PLEKHD1A6NEE1 506 aa41.28■■■■■ 4.2
CCNF-205ENST00000569093 ATP1B4Q9UN42 357 aaPredicted RBP41.28■■■■■ 4.2
CCNF-205ENST00000569093 CDK13Q14004 1512 aaKnown RBP41.24■■■■■ 4.19
CCNF-205ENST00000569093 HECW1Q76N89 1606 aa41.15■■■■■ 4.18
CCNF-205ENST00000569093 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP41.04■■■■■ 4.16
CCNF-205ENST00000569093 ARAP3Q8WWN8 1544 aa41.04■■■■■ 4.16
CCNF-205ENST00000569093 CLIP1P30622 1438 aa41.04■■■■■ 4.16
CCNF-205ENST00000569093 KDM4FA0A1W2PPD8 638 aa41.03■■■■■ 4.16
CCNF-205ENST00000569093 LRRIQ1Q96JM4 1722 aa41.02■■■■■ 4.16
CCNF-205ENST00000569093 TTC37Q6PGP7 1564 aa40.99■■■■■ 4.15
CCNF-205ENST00000569093 PHLDB1Q86UU1 1377 aa40.99■■■■■ 4.15
CCNF-205ENST00000569093 NEO1Q92859 1461 aa40.98■■■■■ 4.15
CCNF-205ENST00000569093 PCF11O94913 1555 aaKnown RBP40.96■■■■■ 4.15
CCNF-205ENST00000569093 CASKIN1Q8WXD9 1431 aa40.95■■■■■ 4.15
CCNF-205ENST00000569093 CDK11AQ9UQ88 783 aaPredicted RBP40.95■■■■■ 4.15
CCNF-205ENST00000569093 RAPGEF3O95398 923 aa40.92■■■■■ 4.14
CCNF-205ENST00000569093 FANCAO15360 1455 aa40.85■■■■■ 4.13
CCNF-205ENST00000569093 TROQ12816 1431 aaPredicted RBP40.84■■■■■ 4.13
CCNF-205ENST00000569093 KIF14Q15058 1648 aa40.83■■■■■ 4.13
CCNF-205ENST00000569093 AKNAQ7Z591 1439 aa40.83■■■■■ 4.13
CCNF-205ENST00000569093 ADGRL1O94910 1474 aa40.82■■■■■ 4.12
CCNF-205ENST00000569093 CCDC18Q5T9S5 1454 aa40.79■■■■■ 4.12
CCNF-205ENST00000569093 FYCO1Q9BQS8 1478 aa40.79■■■■■ 4.12
CCNF-205ENST00000569093 PLCH2O75038 1416 aa40.79■■■■■ 4.12
CCNF-205ENST00000569093 LOC105371045A0A1W2PR82 267 aa40.78■■■■■ 4.12
CCNF-205ENST00000569093 FRMPD1Q5SYB0 1578 aa40.77■■■■■ 4.12
CCNF-205ENST00000569093 CFAP74Q9C0B2 1584 aa40.77■■■■■ 4.12
CCNF-205ENST00000569093 CEP162Q5TB80 1403 aa40.74■■■■■ 4.11
CCNF-205ENST00000569093 DENND4BO75064 1496 aaPredicted RBP40.72■■■■■ 4.11
CCNF-205ENST00000569093 MYO5CQ9NQX4 1742 aa40.72■■■■■ 4.11
CCNF-205ENST00000569093 RICTORQ6R327 1708 aa40.67■■■■■ 4.1
CCNF-205ENST00000569093 EFCAB2Q5VUJ9 269 aa40.65■■■■■ 4.1
CCNF-205ENST00000569093 SCAPERQ9BY12 1400 aa40.6■■■■■ 4.09
CCNF-205ENST00000569093 ARHGAP5Q13017 1502 aa40.57■■■■■ 4.08
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms