RNA–Protein interactions for RNA: ENST00000568977.1

CPNE7-209, Transcript of copine 7, humanhuman

TSL 5

Gene CPNE7, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE7-209ENST00000568977 PRG4Q92954 1404 aaPredicted RBP32.26■■■□□ 2.76
CPNE7-209ENST00000568977 JPH4Q96JJ6 628 aa32.21■■■□□ 2.75
CPNE7-209ENST00000568977 KIAA0586Q9BVV6 1533 aa32.16■■■□□ 2.74
CPNE7-209ENST00000568977 CARMIL1Q5VZK9 1371 aa32.11■■■□□ 2.73
CPNE7-209ENST00000568977 IQGAP2Q13576 1575 aa31.94■■■□□ 2.7
CPNE7-209ENST00000568977 ADCY10Q96PN6 1610 aa31.92■■■□□ 2.7
CPNE7-209ENST00000568977 RAPGEF2Q9Y4G8 1499 aa31.89■■■□□ 2.7
CPNE7-209ENST00000568977 KIF13AQ9H1H9 1805 aa31.88■■■□□ 2.69
CPNE7-209ENST00000568977 MAPKBP1O60336 1514 aa31.82■■■□□ 2.68
CPNE7-209ENST00000568977 CARMIL2Q6F5E8 1435 aa31.82■■■□□ 2.68
CPNE7-209ENST00000568977 PTPRGP23470 1445 aa31.77■■■□□ 2.68
CPNE7-209ENST00000568977 NPM1P06748 294 aaKnown RBP eCLIP31.76■■■□□ 2.67
CPNE7-209ENST00000568977 TNIKQ9UKE5 1360 aa31.75■■■□□ 2.67
CPNE7-209ENST00000568977 DISP1Q96F81 1524 aa31.74■■■□□ 2.67
CPNE7-209ENST00000568977 UGGT2Q9NYU1 1516 aa31.73■■■□□ 2.67
CPNE7-209ENST00000568977 ABCC10Q5T3U5 1492 aa31.72■■■□□ 2.67
CPNE7-209ENST00000568977 DIP2BQ9P265 1576 aa31.72■■■□□ 2.67
CPNE7-209ENST00000568977 CTTNBP2Q8WZ74 1663 aa31.71■■■□□ 2.67
CPNE7-209ENST00000568977 TTBK1Q5TCY1 1321 aaPredicted RBP31.69■■■□□ 2.66
CPNE7-209ENST00000568977 KIAA0556O60303 1618 aa31.67■■■□□ 2.66
CPNE7-209ENST00000568977 PRXQ9BXM0 1461 aa31.65■■■□□ 2.66
CPNE7-209ENST00000568977 ABCC2Q92887 1545 aa31.62■■■□□ 2.65
CPNE7-209ENST00000568977 FAM69CQ0P6D2 419 aa31.61■■■□□ 2.65
CPNE7-209ENST00000568977 UHRF1BP1LA0JNW5 1464 aa31.59■■■□□ 2.65
CPNE7-209ENST00000568977 UACAQ9BZF9 1416 aa31.57■■■□□ 2.64
CPNE7-209ENST00000568977 GOLGA3Q08378 1498 aa31.47■■■□□ 2.63
CPNE7-209ENST00000568977 ASXL2Q76L83 1435 aa31.47■■■□□ 2.63
CPNE7-209ENST00000568977 TSPOAP1O95153 1857 aa31.46■■■□□ 2.63
CPNE7-209ENST00000568977 PLB1Q6P1J6 1458 aa31.45■■■□□ 2.62
CPNE7-209ENST00000568977 KDM5BQ9UGL1 1544 aa31.44■■■□□ 2.62
CPNE7-209ENST00000568977 ZCCHC11Q5TAX3 1644 aaKnown RBP31.42■■■□□ 2.62
CPNE7-209ENST00000568977 CSRNP3Q8WYN3 585 aa31.38■■■□□ 2.61
CPNE7-209ENST00000568977 EEA1Q15075 1411 aa31.38■■■□□ 2.61
CPNE7-209ENST00000568977 GLI2P10070 1586 aa31.38■■■□□ 2.61
CPNE7-209ENST00000568977 KDM6BO15054 1643 aa31.35■■■□□ 2.61
CPNE7-209ENST00000568977 ABCA8O94911 1581 aa31.33■■■□□ 2.61
CPNE7-209ENST00000568977 PPRC1Q5VV67 1664 aaKnown RBP31.31■■■□□ 2.6
CPNE7-209ENST00000568977 EPRSP07814 1512 aaKnown RBP31.29■■■□□ 2.6
CPNE7-209ENST00000568977 MAP3K4Q9Y6R4 1608 aa31.24■■■□□ 2.59
CPNE7-209ENST00000568977 WDR7Q9Y4E6 1490 aa31.24■■■□□ 2.59
CPNE7-209ENST00000568977 SAMD9Q5K651 1589 aa31.24■■■□□ 2.59
CPNE7-209ENST00000568977 AEBP2Q6ZN18 517 aaPredicted RBP31.2■■■□□ 2.59
CPNE7-209ENST00000568977 KIF21BO75037 1637 aa31.16■■■□□ 2.58
CPNE7-209ENST00000568977 FAM9AQ8IZU1 332 aaPredicted RBP31.16■■■□□ 2.58
CPNE7-209ENST00000568977 P3H3Q8IVL6 736 aa31.14■■■□□ 2.58
CPNE7-209ENST00000568977 TEX14Q8IWB6 1497 aa31.1■■■□□ 2.57
CPNE7-209ENST00000568977 CFAP43Q8NDM7 1665 aa31.06■■■□□ 2.56
CPNE7-209ENST00000568977 RAPGEF6Q8TEU7 1601 aa31.06■■■□□ 2.56
CPNE7-209ENST00000568977 CHIC1Q5VXU3 224 aa31.04■■■□□ 2.56
CPNE7-209ENST00000568977 ATP10BO94823 1461 aa31.01■■■□□ 2.56
CPNE7-209ENST00000568977 ARID3CA6NKF2 412 aa31■■■□□ 2.55
CPNE7-209ENST00000568977 COL17A1Q9UMD9 1497 aaPredicted RBP31■■■□□ 2.55
CPNE7-209ENST00000568977 FHOD3Q2V2M9 1422 aa30.99■■■□□ 2.55
CPNE7-209ENST00000568977 RANGAP1P46060 587 aaPredicted RBP30.99■■■□□ 2.55
CPNE7-209ENST00000568977 EFCAB5A4FU69 1503 aa30.98■■■□□ 2.55
CPNE7-209ENST00000568977 KCNH8Q96L42 1107 aa30.97■■■□□ 2.55
CPNE7-209ENST00000568977 MAGI3Q5TCQ9 1506 aa30.97■■■□□ 2.55
CPNE7-209ENST00000568977 CD109Q6YHK3 1445 aa30.97■■■□□ 2.55
CPNE7-209ENST00000568977 NUP153P49790 1475 aaKnown RBP30.92■■■□□ 2.54
CPNE7-209ENST00000568977 ABCA9Q8IUA7 1624 aa30.87■■■□□ 2.53
CPNE7-209ENST00000568977 KDM4FA0A1W2PPD8 638 aa30.81■■■□□ 2.52
CPNE7-209ENST00000568977 EHMT2Q96KQ7 1210 aa30.81■■■□□ 2.52
CPNE7-209ENST00000568977 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.79■■■□□ 2.52
CPNE7-209ENST00000568977 UBTFP17480 764 aaKnown RBP30.79■■■□□ 2.52
CPNE7-209ENST00000568977 HNRNPUL2Q1KMD3 747 aaKnown RBP30.79■■■□□ 2.52
CPNE7-209ENST00000568977 ADGRL1O94910 1474 aa30.72■■■□□ 2.51
CPNE7-209ENST00000568977 ARHGAP35Q9NRY4 1499 aa30.71■■■□□ 2.51
CPNE7-209ENST00000568977 ARAP3Q8WWN8 1544 aa30.71■■■□□ 2.51
CPNE7-209ENST00000568977 CDK13Q14004 1512 aaKnown RBP30.66■■■□□ 2.5
CPNE7-209ENST00000568977 FMN1Q68DA7 1419 aa30.64■■■□□ 2.5
CPNE7-209ENST00000568977 NEO1Q92859 1461 aa30.64■■■□□ 2.5
CPNE7-209ENST00000568977 HECW1Q76N89 1606 aa30.64■■■□□ 2.5
CPNE7-209ENST00000568977 PHLDB1Q86UU1 1377 aa30.64■■■□□ 2.5
CPNE7-209ENST00000568977 PLEKHD1A6NEE1 506 aa30.63■■■□□ 2.49
CPNE7-209ENST00000568977 TTC37Q6PGP7 1564 aa30.59■■■□□ 2.49
CPNE7-209ENST00000568977 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP30.59■■■□□ 2.492e-8■■□□□ 11.8
CPNE7-209ENST00000568977 FRMPD1Q5SYB0 1578 aa30.54■■■□□ 2.48
CPNE7-209ENST00000568977 CFAP74Q9C0B2 1584 aa30.53■■■□□ 2.48
CPNE7-209ENST00000568977 FANCAO15360 1455 aa30.49■■■□□ 2.47
CPNE7-209ENST00000568977 ATP1B4Q9UN42 357 aaPredicted RBP30.48■■■□□ 2.47
CPNE7-209ENST00000568977 RAPGEF3O95398 923 aa30.47■■■□□ 2.47
CPNE7-209ENST00000568977 LRRIQ1Q96JM4 1722 aa30.47■■■□□ 2.47
CPNE7-209ENST00000568977 RICTORQ6R327 1708 aa30.44■■■□□ 2.46
CPNE7-209ENST00000568977 PCF11O94913 1555 aaKnown RBP30.43■■■□□ 2.46
CPNE7-209ENST00000568977 AKNAQ7Z591 1439 aa30.43■■■□□ 2.46
CPNE7-209ENST00000568977 DENND4BO75064 1496 aaPredicted RBP30.42■■■□□ 2.46
CPNE7-209ENST00000568977 KIF14Q15058 1648 aa30.4■■■□□ 2.46
CPNE7-209ENST00000568977 MYO5CQ9NQX4 1742 aa30.39■■■□□ 2.46
CPNE7-209ENST00000568977 ARHGEF40Q8TER5 1519 aa30.37■■■□□ 2.45
CPNE7-209ENST00000568977 CDK11AQ9UQ88 783 aaPredicted RBP30.37■■■□□ 2.45
CPNE7-209ENST00000568977 TROQ12816 1431 aaPredicted RBP30.37■■■□□ 2.45
CPNE7-209ENST00000568977 PLCH2O75038 1416 aa30.36■■■□□ 2.45
CPNE7-209ENST00000568977 CASKIN1Q8WXD9 1431 aa30.35■■■□□ 2.45
CPNE7-209ENST00000568977 ZMYM4Q5VZL5 1548 aa30.33■■■□□ 2.45
CPNE7-209ENST00000568977 CCDC18Q5T9S5 1454 aa30.32■■■□□ 2.44
CPNE7-209ENST00000568977 CLIP1P30622 1438 aa30.32■■■□□ 2.44
CPNE7-209ENST00000568977 ADAMTSL3P82987 1691 aa30.29■■■□□ 2.44
CPNE7-209ENST00000568977 FYCO1Q9BQS8 1478 aa30.28■■■□□ 2.44
CPNE7-209ENST00000568977 BCORL1Q5H9F3 1711 aa30.26■■■□□ 2.43
CPNE7-209ENST00000568977 POGZQ7Z3K3 1410 aa30.25■■■□□ 2.43
Retrieved 100 of 20,778 RNA–protein pairs in 6.9 ms