RNA–Protein interactions for RNA: ENST00000568896.1

SYNGR3-205, Transcript of synaptogyrin 3, humanhuman

TSL 5

Gene SYNGR3, Length 533 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-205ENST00000568896 RUSC2Q8N2Y8 1516 aa31.36■■■□□ 2.61
SYNGR3-205ENST00000568896 KIF27Q86VH2 1401 aa31.28■■■□□ 2.6
SYNGR3-205ENST00000568896 NPM1P06748 294 aaKnown RBP eCLIP31.25■■■□□ 2.59
SYNGR3-205ENST00000568896 KIF13AQ9H1H9 1805 aa31.24■■■□□ 2.59
SYNGR3-205ENST00000568896 KIAA0586Q9BVV6 1533 aa31.24■■■□□ 2.59
SYNGR3-205ENST00000568896 FAM69CQ0P6D2 419 aa31.23■■■□□ 2.59
SYNGR3-205ENST00000568896 ABCC10Q5T3U5 1492 aa31.16■■■□□ 2.58
SYNGR3-205ENST00000568896 ADCY10Q96PN6 1610 aa31.14■■■□□ 2.58
SYNGR3-205ENST00000568896 CUL7Q14999 1698 aa31.13■■■□□ 2.57
SYNGR3-205ENST00000568896 CARMIL1Q5VZK9 1371 aa31.12■■■□□ 2.57
SYNGR3-205ENST00000568896 MAPKBP1O60336 1514 aa31.1■■■□□ 2.57
SYNGR3-205ENST00000568896 TTBK1Q5TCY1 1321 aaPredicted RBP31.09■■■□□ 2.57
SYNGR3-205ENST00000568896 PTPRGP23470 1445 aa31.04■■■□□ 2.56
SYNGR3-205ENST00000568896 DIP2BQ9P265 1576 aa31.04■■■□□ 2.56
SYNGR3-205ENST00000568896 TNIKQ9UKE5 1360 aa30.94■■■□□ 2.54
SYNGR3-205ENST00000568896 CARMIL2Q6F5E8 1435 aa30.92■■■□□ 2.54
SYNGR3-205ENST00000568896 IQGAP2Q13576 1575 aa30.86■■■□□ 2.53
SYNGR3-205ENST00000568896 ABCC2Q92887 1545 aa30.83■■■□□ 2.53
SYNGR3-205ENST00000568896 CHIC1Q5VXU3 224 aa30.83■■■□□ 2.53
SYNGR3-205ENST00000568896 TSPOAP1O95153 1857 aa30.82■■■□□ 2.53
SYNGR3-205ENST00000568896 KDM6BO15054 1643 aa30.8■■■□□ 2.52
SYNGR3-205ENST00000568896 DISP1Q96F81 1524 aa30.8■■■□□ 2.52
SYNGR3-205ENST00000568896 ASXL2Q76L83 1435 aa30.79■■■□□ 2.52
SYNGR3-205ENST00000568896 RAPGEF2Q9Y4G8 1499 aa30.77■■■□□ 2.52
SYNGR3-205ENST00000568896 UACAQ9BZF9 1416 aa30.77■■■□□ 2.52
SYNGR3-205ENST00000568896 UHRF1BP1LA0JNW5 1464 aa30.75■■■□□ 2.51
SYNGR3-205ENST00000568896 KDM4FA0A1W2PPD8 638 aa30.74■■■□□ 2.51
SYNGR3-205ENST00000568896 PLB1Q6P1J6 1458 aa30.73■■■□□ 2.51
SYNGR3-205ENST00000568896 UGGT2Q9NYU1 1516 aa30.69■■■□□ 2.5
SYNGR3-205ENST00000568896 EEA1Q15075 1411 aa30.65■■■□□ 2.5
SYNGR3-205ENST00000568896 PRXQ9BXM0 1461 aa30.65■■■□□ 2.5
SYNGR3-205ENST00000568896 GLI2P10070 1586 aa30.65■■■□□ 2.5
SYNGR3-205ENST00000568896 KDM5BQ9UGL1 1544 aa30.63■■■□□ 2.49
SYNGR3-205ENST00000568896 KIAA0556O60303 1618 aa30.6■■■□□ 2.49
SYNGR3-205ENST00000568896 PPRC1Q5VV67 1664 aaKnown RBP30.6■■■□□ 2.49
SYNGR3-205ENST00000568896 EPRSP07814 1512 aaKnown RBP30.59■■■□□ 2.49
SYNGR3-205ENST00000568896 CSRNP3Q8WYN3 585 aa30.59■■■□□ 2.49
SYNGR3-205ENST00000568896 COL17A1Q9UMD9 1497 aaPredicted RBP30.53■■■□□ 2.48
SYNGR3-205ENST00000568896 ZCCHC11Q5TAX3 1644 aaKnown RBP30.53■■■□□ 2.48
SYNGR3-205ENST00000568896 FAM9AQ8IZU1 332 aaPredicted RBP30.51■■■□□ 2.47
SYNGR3-205ENST00000568896 MAP3K4Q9Y6R4 1608 aa30.46■■■□□ 2.47
SYNGR3-205ENST00000568896 CTTNBP2Q8WZ74 1663 aa30.43■■■□□ 2.46
SYNGR3-205ENST00000568896 WDR7Q9Y4E6 1490 aa30.42■■■□□ 2.46
SYNGR3-205ENST00000568896 GOLGA3Q08378 1498 aa30.41■■■□□ 2.46
SYNGR3-205ENST00000568896 TEX14Q8IWB6 1497 aa30.4■■■□□ 2.46
SYNGR3-205ENST00000568896 KCNH8Q96L42 1107 aa30.4■■■□□ 2.46
SYNGR3-205ENST00000568896 ABCA8O94911 1581 aa30.36■■■□□ 2.45
SYNGR3-205ENST00000568896 ADGRL1O94910 1474 aa30.35■■■□□ 2.45
SYNGR3-205ENST00000568896 KIF21BO75037 1637 aa30.35■■■□□ 2.45
SYNGR3-205ENST00000568896 P3H3Q8IVL6 736 aa30.33■■■□□ 2.45
SYNGR3-205ENST00000568896 CD109Q6YHK3 1445 aa30.3■■■□□ 2.44
SYNGR3-205ENST00000568896 ARID3CA6NKF2 412 aa30.3■■■□□ 2.44
SYNGR3-205ENST00000568896 MAGI3Q5TCQ9 1506 aa30.23■■■□□ 2.43
SYNGR3-205ENST00000568896 ATP10BO94823 1461 aa30.17■■■□□ 2.42
SYNGR3-205ENST00000568896 CFAP43Q8NDM7 1665 aa30.17■■■□□ 2.42
SYNGR3-205ENST00000568896 EHMT2Q96KQ7 1210 aa30.11■■■□□ 2.41
SYNGR3-205ENST00000568896 RANGAP1P46060 587 aaPredicted RBP30.09■■■□□ 2.41
SYNGR3-205ENST00000568896 SAMD9Q5K651 1589 aa30.07■■■□□ 2.4
SYNGR3-205ENST00000568896 UBTFP17480 764 aaKnown RBP30.04■■■□□ 2.4
SYNGR3-205ENST00000568896 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.03■■■□□ 2.4
SYNGR3-205ENST00000568896 HNRNPUL2Q1KMD3 747 aaKnown RBP30.03■■■□□ 2.4
SYNGR3-205ENST00000568896 ARAP3Q8WWN8 1544 aa30■■■□□ 2.39
SYNGR3-205ENST00000568896 ILDR1Q86SU0 546 aaPredicted RBP29.99■■■□□ 2.39
SYNGR3-205ENST00000568896 HECW2Q9P2P5 1572 aa29.97■■■□□ 2.39
SYNGR3-205ENST00000568896 RAPGEF6Q8TEU7 1601 aa29.96■■■□□ 2.39
SYNGR3-205ENST00000568896 RAPGEF3O95398 923 aa29.95■■■□□ 2.39
SYNGR3-205ENST00000568896 ABCA9Q8IUA7 1624 aa29.94■■■□□ 2.38
SYNGR3-205ENST00000568896 EFCAB5A4FU69 1503 aa29.94■■■□□ 2.38
SYNGR3-205ENST00000568896 FHOD3Q2V2M9 1422 aa29.94■■■□□ 2.38
SYNGR3-205ENST00000568896 NUP153P49790 1475 aaKnown RBP29.92■■■□□ 2.38
SYNGR3-205ENST00000568896 PHLDB1Q86UU1 1377 aa29.9■■■□□ 2.38
SYNGR3-205ENST00000568896 NEO1Q92859 1461 aa29.84■■■□□ 2.37
SYNGR3-205ENST00000568896 PLEKHD1A6NEE1 506 aa29.82■■■□□ 2.36
SYNGR3-205ENST00000568896 ARHGAP35Q9NRY4 1499 aa29.8■■■□□ 2.36
SYNGR3-205ENST00000568896 FRMPD1Q5SYB0 1578 aa29.74■■■□□ 2.35
SYNGR3-205ENST00000568896 ARID4BQ4LE39 1312 aaPredicted RBP29.72■■■□□ 2.35
SYNGR3-205ENST00000568896 PTPRMP28827 1452 aa29.71■■■□□ 2.35
SYNGR3-205ENST00000568896 ADAMTSL3P82987 1691 aa29.69■■■□□ 2.34
SYNGR3-205ENST00000568896 AKNAQ7Z591 1439 aa29.69■■■□□ 2.34
SYNGR3-205ENST00000568896 DENND4BO75064 1496 aaPredicted RBP29.67■■■□□ 2.34
SYNGR3-205ENST00000568896 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.66■■■□□ 2.34
SYNGR3-205ENST00000568896 FANCAO15360 1455 aa29.65■■■□□ 2.34
SYNGR3-205ENST00000568896 FMN1Q68DA7 1419 aa29.64■■■□□ 2.34
SYNGR3-205ENST00000568896 CLIP1P30622 1438 aa29.62■■■□□ 2.33
SYNGR3-205ENST00000568896 CDK13Q14004 1512 aaKnown RBP29.62■■■□□ 2.33
SYNGR3-205ENST00000568896 ATP1B4Q9UN42 357 aaPredicted RBP29.61■■■□□ 2.33
SYNGR3-205ENST00000568896 TTC37Q6PGP7 1564 aa29.6■■■□□ 2.33
SYNGR3-205ENST00000568896 BCORL1Q5H9F3 1711 aa29.59■■■□□ 2.33
SYNGR3-205ENST00000568896 MADDQ8WXG6 1647 aa29.57■■■□□ 2.32
SYNGR3-205ENST00000568896 RICTORQ6R327 1708 aa29.57■■■□□ 2.32
SYNGR3-205ENST00000568896 LOC105371045A0A1W2PR82 267 aa29.56■■■□□ 2.32
SYNGR3-205ENST00000568896 ARHGEF40Q8TER5 1519 aa29.55■■■□□ 2.32
SYNGR3-205ENST00000568896 CEP162Q5TB80 1403 aa29.52■■■□□ 2.32
SYNGR3-205ENST00000568896 YEATS2Q9ULM3 1422 aa29.52■■■□□ 2.32
SYNGR3-205ENST00000568896 PLPPR3Q6T4P5 718 aa29.51■■■□□ 2.31
SYNGR3-205ENST00000568896 HECW1Q76N89 1606 aa29.51■■■□□ 2.31
SYNGR3-205ENST00000568896 CFAP74Q9C0B2 1584 aa29.51■■■□□ 2.31
SYNGR3-205ENST00000568896 PLCH2O75038 1416 aa29.5■■■□□ 2.31
SYNGR3-205ENST00000568896 SCAPERQ9BY12 1400 aa29.48■■■□□ 2.31
SYNGR3-205ENST00000568896 ZMYM4Q5VZL5 1548 aa29.46■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms