RNA–Protein interactions for RNA: ENST00000568890.5

CNEP1R1-210, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 1 (best)

Gene CNEP1R1, Length 1,992 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-210ENST00000568890 KIAA0586Q9BVV6 1533 aa27.54■■■□□ 2
CNEP1R1-210ENST00000568890 ARHGEF11O15085 1522 aa27.5■■□□□ 1.99
CNEP1R1-210ENST00000568890 ERCC6L2Q5T890 1561 aa27.44■■□□□ 1.98
CNEP1R1-210ENST00000568890 RIMBP3CA6NJZ7 1639 aa27.43■■□□□ 1.98
CNEP1R1-210ENST00000568890 RIMBP3BA6NNM3 1639 aa27.43■■□□□ 1.98
CNEP1R1-210ENST00000568890 RIMBP3Q9UFD9 1639 aa27.43■■□□□ 1.98
CNEP1R1-210ENST00000568890 PRG4Q92954 1404 aaPredicted RBP27.41■■□□□ 1.98
CNEP1R1-210ENST00000568890 SHROOM2Q13796 1616 aa27.41■■□□□ 1.98
CNEP1R1-210ENST00000568890 KIF21BO75037 1637 aa27.4■■□□□ 1.98
CNEP1R1-210ENST00000568890 CYB5RLQ6IPT4 315 aa27.37■■□□□ 1.97
CNEP1R1-210ENST00000568890 IQGAP2Q13576 1575 aa27.36■■□□□ 1.97
CNEP1R1-210ENST00000568890 UBTFP17480 764 aaKnown RBP27.34■■□□□ 1.97
CNEP1R1-210ENST00000568890 ARAP1Q96P48 1450 aa27.33■■□□□ 1.97
CNEP1R1-210ENST00000568890 GOLGA3Q08378 1498 aa27.3■■□□□ 1.96
CNEP1R1-210ENST00000568890 LOC105371045A0A1W2PR82 267 aa27.27■■□□□ 1.96
CNEP1R1-210ENST00000568890 RANGAP1P46060 587 aaPredicted RBP27.27■■□□□ 1.96
CNEP1R1-210ENST00000568890 DISP1Q96F81 1524 aa27.26■■□□□ 1.95
CNEP1R1-210ENST00000568890 UGGT2Q9NYU1 1516 aa27.26■■□□□ 1.95
CNEP1R1-210ENST00000568890 CTTNBP2Q8WZ74 1663 aa27.25■■□□□ 1.95
CNEP1R1-210ENST00000568890 TTBK1Q5TCY1 1321 aaPredicted RBP27.2■■□□□ 1.94
CNEP1R1-210ENST00000568890 P3H3Q8IVL6 736 aa27.19■■□□□ 1.94
CNEP1R1-210ENST00000568890 CARMIL2Q6F5E8 1435 aa27.18■■□□□ 1.94
CNEP1R1-210ENST00000568890 TNIKQ9UKE5 1360 aa27.13■■□□□ 1.93
CNEP1R1-210ENST00000568890 PTPRGP23470 1445 aa27.12■■□□□ 1.93
CNEP1R1-210ENST00000568890 KIAA0556O60303 1618 aa27.1■■□□□ 1.93
CNEP1R1-210ENST00000568890 SAMD9Q5K651 1589 aa27.02■■□□□ 1.92
CNEP1R1-210ENST00000568890 FHOD3Q2V2M9 1422 aa26.99■■□□□ 1.91
CNEP1R1-210ENST00000568890 ARHGAP35Q9NRY4 1499 aa26.99■■□□□ 1.91
CNEP1R1-210ENST00000568890 PLB1Q6P1J6 1458 aa26.94■■□□□ 1.9
CNEP1R1-210ENST00000568890 UACAQ9BZF9 1416 aa26.93■■□□□ 1.9
CNEP1R1-210ENST00000568890 EFCAB5A4FU69 1503 aa26.9■■□□□ 1.9
CNEP1R1-210ENST00000568890 ADCY10Q96PN6 1610 aa26.9■■□□□ 1.9
CNEP1R1-210ENST00000568890 CLIP1P30622 1438 aa26.88■■□□□ 1.89
CNEP1R1-210ENST00000568890 CEP162Q5TB80 1403 aa26.85■■□□□ 1.89
CNEP1R1-210ENST00000568890 UHRF1BP1LA0JNW5 1464 aa26.84■■□□□ 1.89
CNEP1R1-210ENST00000568890 ABCA8O94911 1581 aa26.83■■□□□ 1.88
CNEP1R1-210ENST00000568890 ABCC2Q92887 1545 aa26.81■■□□□ 1.88
CNEP1R1-210ENST00000568890 ARID3CA6NKF2 412 aa26.81■■□□□ 1.88
CNEP1R1-210ENST00000568890 NPM1P06748 294 aaKnown RBP eCLIP26.79■■□□□ 1.88
CNEP1R1-210ENST00000568890 KDM5BQ9UGL1 1544 aa26.75■■□□□ 1.87
CNEP1R1-210ENST00000568890 FMN1Q68DA7 1419 aa26.72■■□□□ 1.87
CNEP1R1-210ENST00000568890 NUP153P49790 1475 aaKnown RBP26.71■■□□□ 1.87
CNEP1R1-210ENST00000568890 ATP10BO94823 1461 aa26.7■■□□□ 1.87
CNEP1R1-210ENST00000568890 RAPGEF6Q8TEU7 1601 aa26.68■■□□□ 1.86
CNEP1R1-210ENST00000568890 ATP1B4Q9UN42 357 aaPredicted RBP26.68■■□□□ 1.86
CNEP1R1-210ENST00000568890 TRHP20396 242 aaPredicted RBP26.65■■□□□ 1.86
CNEP1R1-210ENST00000568890 ASXL2Q76L83 1435 aa26.64■■□□□ 1.86
CNEP1R1-210ENST00000568890 MAPKBP1O60336 1514 aa26.63■■□□□ 1.85
CNEP1R1-210ENST00000568890 ZCCHC11Q5TAX3 1644 aaKnown RBP26.62■■□□□ 1.85
CNEP1R1-210ENST00000568890 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.6■■□□□ 1.85
CNEP1R1-210ENST00000568890 HNRNPUL2Q1KMD3 747 aaKnown RBP26.6■■□□□ 1.85
CNEP1R1-210ENST00000568890 CASKIN1Q8WXD9 1431 aa26.59■■□□□ 1.85
CNEP1R1-210ENST00000568890 FAM69CQ0P6D2 419 aa26.55■■□□□ 1.84
CNEP1R1-210ENST00000568890 CDK13Q14004 1512 aaKnown RBP26.55■■□□□ 1.84
CNEP1R1-210ENST00000568890 KCNH8Q96L42 1107 aa26.54■■□□□ 1.84
CNEP1R1-210ENST00000568890 EPRSP07814 1512 aaKnown RBP26.54■■□□□ 1.84
CNEP1R1-210ENST00000568890 PCF11O94913 1555 aaKnown RBP26.54■■□□□ 1.84
CNEP1R1-210ENST00000568890 ABCC10Q5T3U5 1492 aa26.53■■□□□ 1.84
CNEP1R1-210ENST00000568890 WDR7Q9Y4E6 1490 aa26.5■■□□□ 1.83
CNEP1R1-210ENST00000568890 VPS8Q8N3P4 1428 aa26.48■■□□□ 1.83
CNEP1R1-210ENST00000568890 HECW1Q76N89 1606 aa26.48■■□□□ 1.83
CNEP1R1-210ENST00000568890 PLEKHD1A6NEE1 506 aa26.47■■□□□ 1.83
CNEP1R1-210ENST00000568890 FYCO1Q9BQS8 1478 aa26.47■■□□□ 1.83
CNEP1R1-210ENST00000568890 LRRIQ1Q96JM4 1722 aa26.46■■□□□ 1.83
CNEP1R1-210ENST00000568890 DIP2BQ9P265 1576 aa26.44■■□□□ 1.82
CNEP1R1-210ENST00000568890 KIF13AQ9H1H9 1805 aa26.4■■□□□ 1.82
CNEP1R1-210ENST00000568890 CDK11AQ9UQ88 783 aaPredicted RBP26.37■■□□□ 1.81
CNEP1R1-210ENST00000568890 MAGI3Q5TCQ9 1506 aa26.36■■□□□ 1.81
CNEP1R1-210ENST00000568890 CCDC18Q5T9S5 1454 aa26.35■■□□□ 1.81
CNEP1R1-210ENST00000568890 GLI2P10070 1586 aa26.34■■□□□ 1.81
CNEP1R1-210ENST00000568890 TROQ12816 1431 aaPredicted RBP26.3■■□□□ 1.8
CNEP1R1-210ENST00000568890 KANK4Q5T7N3 995 aaPredicted RBP26.28■■□□□ 1.8
CNEP1R1-210ENST00000568890 CD109Q6YHK3 1445 aa26.27■■□□□ 1.8
CNEP1R1-210ENST00000568890 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.24■■□□□ 1.79
CNEP1R1-210ENST00000568890 MAP3K4Q9Y6R4 1608 aa26.23■■□□□ 1.79
CNEP1R1-210ENST00000568890 KIF14Q15058 1648 aa26.21■■□□□ 1.79
CNEP1R1-210ENST00000568890 MTUS2Q5JR59 1369 aa26.21■■□□□ 1.79
CNEP1R1-210ENST00000568890 ABCA9Q8IUA7 1624 aa26.2■■□□□ 1.79
CNEP1R1-210ENST00000568890 TIAM1Q13009 1591 aa26.2■■□□□ 1.78
CNEP1R1-210ENST00000568890 TSPOAP1O95153 1857 aa26.19■■□□□ 1.78
CNEP1R1-210ENST00000568890 PPRC1Q5VV67 1664 aaKnown RBP26.18■■□□□ 1.78
CNEP1R1-210ENST00000568890 TTC37Q6PGP7 1564 aa26.17■■□□□ 1.78
CNEP1R1-210ENST00000568890 MAP3K1Q13233 1512 aa26.15■■□□□ 1.78
CNEP1R1-210ENST00000568890 LRRC9Q6ZRR7 1453 aa26.14■■□□□ 1.78
CNEP1R1-210ENST00000568890 APLP2Q06481 763 aa26.14■■□□□ 1.77
CNEP1R1-210ENST00000568890 CFAP43Q8NDM7 1665 aa26.14■■□□□ 1.77
CNEP1R1-210ENST00000568890 PLCH2O75038 1416 aa26.11■■□□□ 1.77
CNEP1R1-210ENST00000568890 COL17A1Q9UMD9 1497 aaPredicted RBP26.1■■□□□ 1.77
CNEP1R1-210ENST00000568890 EHBP1L1Q8N3D4 1523 aa26.07■■□□□ 1.76
CNEP1R1-210ENST00000568890 PPARGC1BQ86YN6 1023 aaKnown RBP26.06■■□□□ 1.76
CNEP1R1-210ENST00000568890 TEX14Q8IWB6 1497 aa26.05■■□□□ 1.76
CNEP1R1-210ENST00000568890 GPATCH8Q9UKJ3 1502 aaKnown RBP26.04■■□□□ 1.76
CNEP1R1-210ENST00000568890 NCOA2Q15596 1464 aa26.03■■□□□ 1.76
CNEP1R1-210ENST00000568890 FANCAO15360 1455 aa26.02■■□□□ 1.76
CNEP1R1-210ENST00000568890 EFCAB2Q5VUJ9 269 aa26.01■■□□□ 1.75
CNEP1R1-210ENST00000568890 CCNB3Q8WWL7 1395 aa26■■□□□ 1.75
CNEP1R1-210ENST00000568890 AKNAQ7Z591 1439 aa25.99■■□□□ 1.75
CNEP1R1-210ENST00000568890 RAPGEF3O95398 923 aa25.98■■□□□ 1.75
CNEP1R1-210ENST00000568890 CFDP1Q9UEE9 299 aaPredicted RBP25.97■■□□□ 1.75
CNEP1R1-210ENST00000568890 NEO1Q92859 1461 aa25.97■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms