RNA–Protein interactions for RNA: ENST00000568782.1

UBR1-207, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 615 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-207ENST00000568782 PRG4Q92954 1404 aaPredicted RBP17.53■□□□□ 0.4
UBR1-207ENST00000568782 RUSC2Q8N2Y8 1516 aa17.52■□□□□ 0.39
UBR1-207ENST00000568782 KIAA0586Q9BVV6 1533 aa17.5■□□□□ 0.39
UBR1-207ENST00000568782 ERCC6L2Q5T890 1561 aa17.49■□□□□ 0.39
UBR1-207ENST00000568782 RAPGEF2Q9Y4G8 1499 aa17.44■□□□□ 0.38
UBR1-207ENST00000568782 NPM1P06748 294 aaKnown RBP eCLIP17.43■□□□□ 0.38
UBR1-207ENST00000568782 CARMIL2Q6F5E8 1435 aa17.41■□□□□ 0.38
UBR1-207ENST00000568782 IQGAP2Q13576 1575 aa17.4■□□□□ 0.38
UBR1-207ENST00000568782 TTBK1Q5TCY1 1321 aaPredicted RBP17.35■□□□□ 0.37
UBR1-207ENST00000568782 PTPRGP23470 1445 aa17.32■□□□□ 0.36
UBR1-207ENST00000568782 CTTNBP2Q8WZ74 1663 aa17.32■□□□□ 0.36
UBR1-207ENST00000568782 FAM9AQ8IZU1 332 aaPredicted RBP17.31■□□□□ 0.36
UBR1-207ENST00000568782 TNIKQ9UKE5 1360 aa17.3■□□□□ 0.36
UBR1-207ENST00000568782 CSRNP3Q8WYN3 585 aa17.3■□□□□ 0.36
UBR1-207ENST00000568782 EEA1Q15075 1411 aa17.3■□□□□ 0.36
UBR1-207ENST00000568782 PRXQ9BXM0 1461 aa17.25■□□□□ 0.35
UBR1-207ENST00000568782 UGGT2Q9NYU1 1516 aa17.25■□□□□ 0.35
UBR1-207ENST00000568782 ADCY10Q96PN6 1610 aa17.24■□□□□ 0.35
UBR1-207ENST00000568782 GOLGA3Q08378 1498 aa17.24■□□□□ 0.35
UBR1-207ENST00000568782 DISP1Q96F81 1524 aa17.21■□□□□ 0.34
UBR1-207ENST00000568782 KIAA0556O60303 1618 aa17.2■□□□□ 0.34
UBR1-207ENST00000568782 MAPKBP1O60336 1514 aa17.2■□□□□ 0.34
UBR1-207ENST00000568782 KIF13AQ9H1H9 1805 aa17.19■□□□□ 0.34
UBR1-207ENST00000568782 FAM69CQ0P6D2 419 aa17.18■□□□□ 0.34
UBR1-207ENST00000568782 UACAQ9BZF9 1416 aa17.18■□□□□ 0.34
UBR1-207ENST00000568782 CHIC1Q5VXU3 224 aa17.17■□□□□ 0.34
UBR1-207ENST00000568782 ABCC2Q92887 1545 aa17.15■□□□□ 0.34
UBR1-207ENST00000568782 UHRF1BP1LA0JNW5 1464 aa17.14■□□□□ 0.33
UBR1-207ENST00000568782 ABCC10Q5T3U5 1492 aa17.14■□□□□ 0.33
UBR1-207ENST00000568782 PLB1Q6P1J6 1458 aa17.1■□□□□ 0.33
UBR1-207ENST00000568782 DIP2BQ9P265 1576 aa17.09■□□□□ 0.33
UBR1-207ENST00000568782 TSPOAP1O95153 1857 aa17.08■□□□□ 0.33
UBR1-207ENST00000568782 RANGAP1P46060 587 aaPredicted RBP17.08■□□□□ 0.32
UBR1-207ENST00000568782 P3H3Q8IVL6 736 aa17.08■□□□□ 0.32
UBR1-207ENST00000568782 KIF21BO75037 1637 aa17.07■□□□□ 0.32
UBR1-207ENST00000568782 ASXL2Q76L83 1435 aa17.06■□□□□ 0.32
UBR1-207ENST00000568782 UBTFP17480 764 aaKnown RBP17.06■□□□□ 0.32
UBR1-207ENST00000568782 KDM5BQ9UGL1 1544 aa17.06■□□□□ 0.32
UBR1-207ENST00000568782 ZCCHC11Q5TAX3 1644 aaKnown RBP17.04■□□□□ 0.32
UBR1-207ENST00000568782 EHMT2Q96KQ7 1210 aa17.02■□□□□ 0.32
UBR1-207ENST00000568782 SAMD9Q5K651 1589 aa17■□□□□ 0.31
UBR1-207ENST00000568782 ABCA8O94911 1581 aa16.99■□□□□ 0.31
UBR1-207ENST00000568782 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.98■□□□□ 0.31
UBR1-207ENST00000568782 HNRNPUL2Q1KMD3 747 aaKnown RBP16.98■□□□□ 0.31
UBR1-207ENST00000568782 GLI2P10070 1586 aa16.98■□□□□ 0.31
UBR1-207ENST00000568782 WDR7Q9Y4E6 1490 aa16.95■□□□□ 0.3
UBR1-207ENST00000568782 KCNH8Q96L42 1107 aa16.95■□□□□ 0.3
UBR1-207ENST00000568782 EFCAB5A4FU69 1503 aa16.95■□□□□ 0.3
UBR1-207ENST00000568782 KDM6BO15054 1643 aa16.94■□□□□ 0.3
UBR1-207ENST00000568782 EPRSP07814 1512 aaKnown RBP16.94■□□□□ 0.3
UBR1-207ENST00000568782 RAPGEF6Q8TEU7 1601 aa16.93■□□□□ 0.3
UBR1-207ENST00000568782 ARID3CA6NKF2 412 aa16.93■□□□□ 0.3
UBR1-207ENST00000568782 TEX14Q8IWB6 1497 aa16.92■□□□□ 0.3
UBR1-207ENST00000568782 FHOD3Q2V2M9 1422 aa16.9■□□□□ 0.3
UBR1-207ENST00000568782 AEBP2Q6ZN18 517 aaPredicted RBP16.9■□□□□ 0.3
UBR1-207ENST00000568782 MAP3K4Q9Y6R4 1608 aa16.89■□□□□ 0.29
UBR1-207ENST00000568782 CFAP43Q8NDM7 1665 aa16.88■□□□□ 0.29
UBR1-207ENST00000568782 ATP10BO94823 1461 aa16.87■□□□□ 0.29
UBR1-207ENST00000568782 CD109Q6YHK3 1445 aa16.86■□□□□ 0.29
UBR1-207ENST00000568782 PLEKHD1A6NEE1 506 aa16.85■□□□□ 0.29
UBR1-207ENST00000568782 ATP1B4Q9UN42 357 aaPredicted RBP16.85■□□□□ 0.29
UBR1-207ENST00000568782 PPRC1Q5VV67 1664 aaKnown RBP16.85■□□□□ 0.29
UBR1-207ENST00000568782 FMN1Q68DA7 1419 aa16.83■□□□□ 0.28
UBR1-207ENST00000568782 NUP153P49790 1475 aaKnown RBP16.8■□□□□ 0.28
UBR1-207ENST00000568782 CDK11AQ9UQ88 783 aaPredicted RBP16.78■□□□□ 0.28
UBR1-207ENST00000568782 MAGI3Q5TCQ9 1506 aa16.78■□□□□ 0.28
UBR1-207ENST00000568782 ARHGAP35Q9NRY4 1499 aa16.77■□□□□ 0.28
UBR1-207ENST00000568782 HECW1Q76N89 1606 aa16.75■□□□□ 0.27
UBR1-207ENST00000568782 ABCA9Q8IUA7 1624 aa16.74■□□□□ 0.27
UBR1-207ENST00000568782 PHLDB1Q86UU1 1377 aa16.73■□□□□ 0.27
UBR1-207ENST00000568782 CDK13Q14004 1512 aaKnown RBP16.68■□□□□ 0.26
UBR1-207ENST00000568782 CLIP1P30622 1438 aa16.68■□□□□ 0.26
UBR1-207ENST00000568782 COL17A1Q9UMD9 1497 aaPredicted RBP16.67■□□□□ 0.26
UBR1-207ENST00000568782 NEO1Q92859 1461 aa16.66■□□□□ 0.26
UBR1-207ENST00000568782 ARAP3Q8WWN8 1544 aa16.65■□□□□ 0.26
UBR1-207ENST00000568782 CFAP74Q9C0B2 1584 aa16.64■□□□□ 0.25
UBR1-207ENST00000568782 CCDC18Q5T9S5 1454 aa16.63■□□□□ 0.25
UBR1-207ENST00000568782 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.62■□□□□ 0.25
UBR1-207ENST00000568782 CASKIN1Q8WXD9 1431 aa16.62■□□□□ 0.25
UBR1-207ENST00000568782 KIF14Q15058 1648 aa16.6■□□□□ 0.25
UBR1-207ENST00000568782 FANCAO15360 1455 aa16.6■□□□□ 0.25
UBR1-207ENST00000568782 MYO5CQ9NQX4 1742 aa16.59■□□□□ 0.25
UBR1-207ENST00000568782 PCF11O94913 1555 aaKnown RBP16.59■□□□□ 0.25
UBR1-207ENST00000568782 TTC37Q6PGP7 1564 aa16.59■□□□□ 0.25
UBR1-207ENST00000568782 TROQ12816 1431 aaPredicted RBP16.58■□□□□ 0.24
UBR1-207ENST00000568782 AKNAQ7Z591 1439 aa16.58■□□□□ 0.24
UBR1-207ENST00000568782 FYCO1Q9BQS8 1478 aa16.58■□□□□ 0.24
UBR1-207ENST00000568782 LRRIQ1Q96JM4 1722 aa16.57■□□□□ 0.24
UBR1-207ENST00000568782 RAPGEF3O95398 923 aa16.57■□□□□ 0.24
UBR1-207ENST00000568782 EFCAB2Q5VUJ9 269 aa16.57■□□□□ 0.24
UBR1-207ENST00000568782 DENND4BO75064 1496 aaPredicted RBP16.56■□□□□ 0.24
UBR1-207ENST00000568782 KDM4FA0A1W2PPD8 638 aa16.56■□□□□ 0.24
UBR1-207ENST00000568782 PLCH2O75038 1416 aa16.55■□□□□ 0.24
UBR1-207ENST00000568782 ADGRL1O94910 1474 aa16.54■□□□□ 0.24
UBR1-207ENST00000568782 CEP162Q5TB80 1403 aa16.53■□□□□ 0.24
UBR1-207ENST00000568782 ARID4BQ4LE39 1312 aaPredicted RBP16.51■□□□□ 0.23
UBR1-207ENST00000568782 ARHGAP5Q13017 1502 aa16.5■□□□□ 0.23
UBR1-207ENST00000568782 LOC105371045A0A1W2PR82 267 aa16.49■□□□□ 0.23
UBR1-207ENST00000568782 RICTORQ6R327 1708 aa16.49■□□□□ 0.23
UBR1-207ENST00000568782 SCAPERQ9BY12 1400 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 115.7 ms