RNA–Protein interactions for RNA: ENST00000568459.5

PKM-220, Transcript of pyruvate kinase M1/2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PKM, Length 1,806 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKM-220ENST00000568459 CEP170Q5SW79 1584 aa22.59■■□□□ 1.21
PKM-220ENST00000568459 IGF1RP08069 1367 aa22.54■■□□□ 1.2
PKM-220ENST00000568459 CUL7Q14999 1698 aa22.48■■□□□ 1.19
PKM-220ENST00000568459 SHROOM2Q13796 1616 aa22.46■■□□□ 1.19
PKM-220ENST00000568459 ERCC6L2Q5T890 1561 aa22.44■■□□□ 1.18
PKM-220ENST00000568459 JPH4Q96JJ6 628 aa22.43■■□□□ 1.18
PKM-220ENST00000568459 CARMIL1Q5VZK9 1371 aa22.41■■□□□ 1.18
PKM-220ENST00000568459 TRHP20396 242 aaPredicted RBP22.39■■□□□ 1.17
PKM-220ENST00000568459 PRG4Q92954 1404 aaPredicted RBP22.38■■□□□ 1.17
PKM-220ENST00000568459 RUSC2Q8N2Y8 1516 aa22.38■■□□□ 1.17
PKM-220ENST00000568459 KIAA0586Q9BVV6 1533 aa22.35■■□□□ 1.17
PKM-220ENST00000568459 PELP1Q8IZL8 1130 aaKnown RBP22.33■■□□□ 1.16
PKM-220ENST00000568459 FAM9AQ8IZU1 332 aaPredicted RBP22.28■■□□□ 1.16
PKM-220ENST00000568459 RAPGEF2Q9Y4G8 1499 aa22.24■■□□□ 1.15
PKM-220ENST00000568459 IQGAP2Q13576 1575 aa22.18■■□□□ 1.14
PKM-220ENST00000568459 CARMIL2Q6F5E8 1435 aa22.15■■□□□ 1.14
PKM-220ENST00000568459 NPM1P06748 294 aaKnown RBP eCLIP22.13■■□□□ 1.13
PKM-220ENST00000568459 EEA1Q15075 1411 aa22.11■■□□□ 1.13
PKM-220ENST00000568459 PTPRGP23470 1445 aa22.1■■□□□ 1.13
PKM-220ENST00000568459 TTBK1Q5TCY1 1321 aaPredicted RBP22.09■■□□□ 1.13
PKM-220ENST00000568459 TNIKQ9UKE5 1360 aa22.08■■□□□ 1.12
PKM-220ENST00000568459 PRXQ9BXM0 1461 aa22.07■■□□□ 1.12
PKM-220ENST00000568459 ADCY10Q96PN6 1610 aa22.06■■□□□ 1.12
PKM-220ENST00000568459 CTTNBP2Q8WZ74 1663 aa22.05■■□□□ 1.12
PKM-220ENST00000568459 CSRNP3Q8WYN3 585 aa22.04■■□□□ 1.12
PKM-220ENST00000568459 UGGT2Q9NYU1 1516 aa22.04■■□□□ 1.12
PKM-220ENST00000568459 DISP1Q96F81 1524 aa22.02■■□□□ 1.12
PKM-220ENST00000568459 KIF13AQ9H1H9 1805 aa21.97■■□□□ 1.11
PKM-220ENST00000568459 SCAF1Q9H7N4 1312 aaKnown RBP21.97■■□□□ 1.11
PKM-220ENST00000568459 MAPKBP1O60336 1514 aa21.97■■□□□ 1.11
PKM-220ENST00000568459 KIAA0556O60303 1618 aa21.95■■□□□ 1.1
PKM-220ENST00000568459 CEP162Q5TB80 1403 aa21.93■■□□□ 1.1
PKM-220ENST00000568459 GOLGA3Q08378 1498 aa21.93■■□□□ 1.1
PKM-220ENST00000568459 FAM69CQ0P6D2 419 aa21.93■■□□□ 1.1
PKM-220ENST00000568459 UACAQ9BZF9 1416 aa21.92■■□□□ 1.1
PKM-220ENST00000568459 ABCC10Q5T3U5 1492 aa21.92■■□□□ 1.1
PKM-220ENST00000568459 CCER1Q8TC90 406 aaPredicted RBP21.91■■□□□ 1.1
PKM-220ENST00000568459 ABCC2Q92887 1545 aa21.9■■□□□ 1.1
PKM-220ENST00000568459 UHRF1BP1LA0JNW5 1464 aa21.9■■□□□ 1.1
PKM-220ENST00000568459 DIP2BQ9P265 1576 aa21.85■■□□□ 1.09
PKM-220ENST00000568459 EHMT2Q96KQ7 1210 aa21.85■■□□□ 1.09
PKM-220ENST00000568459 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.83■■□□□ 1.09
PKM-220ENST00000568459 PLB1Q6P1J6 1458 aa21.81■■□□□ 1.08
PKM-220ENST00000568459 ASXL2Q76L83 1435 aa21.8■■□□□ 1.08
PKM-220ENST00000568459 ACIN1Q9UKV3 1341 aaKnown RBP21.8■■□□□ 1.08
PKM-220ENST00000568459 KDM5BQ9UGL1 1544 aa21.8■■□□□ 1.08
PKM-220ENST00000568459 P3H3Q8IVL6 736 aa21.78■■□□□ 1.08
PKM-220ENST00000568459 TSPOAP1O95153 1857 aa21.77■■□□□ 1.08
PKM-220ENST00000568459 KIF21BO75037 1637 aa21.76■■□□□ 1.07
PKM-220ENST00000568459 ZCCHC11Q5TAX3 1644 aaKnown RBP21.76■■□□□ 1.07
PKM-220ENST00000568459 ABCA8O94911 1581 aa21.73■■□□□ 1.07
PKM-220ENST00000568459 RANGAP1P46060 587 aaPredicted RBP21.73■■□□□ 1.07
PKM-220ENST00000568459 CENPBP07199 599 aaPredicted RBP21.71■■□□□ 1.07
PKM-220ENST00000568459 DIEXFQ68CQ4 756 aaKnown RBP21.71■■□□□ 1.07
PKM-220ENST00000568459 SAMD9Q5K651 1589 aa21.71■■□□□ 1.07
PKM-220ENST00000568459 GLI2P10070 1586 aa21.69■■□□□ 1.06
PKM-220ENST00000568459 UBTFP17480 764 aaKnown RBP21.67■■□□□ 1.06
PKM-220ENST00000568459 EPRSP07814 1512 aaKnown RBP21.66■■□□□ 1.06
PKM-220ENST00000568459 WDR7Q9Y4E6 1490 aa21.64■■□□□ 1.05
PKM-220ENST00000568459 KDM6BO15054 1643 aa21.6■■□□□ 1.05
PKM-220ENST00000568459 ARID3CA6NKF2 412 aa21.6■■□□□ 1.05
PKM-220ENST00000568459 NEUROD1Q13562 356 aa21.6■■□□□ 1.05
PKM-220ENST00000568459 KCNH8Q96L42 1107 aa21.6■■□□□ 1.05
PKM-220ENST00000568459 RAPGEF6Q8TEU7 1601 aa21.59■■□□□ 1.05
PKM-220ENST00000568459 FHOD3Q2V2M9 1422 aa21.59■■□□□ 1.05
PKM-220ENST00000568459 EFCAB5A4FU69 1503 aa21.59■■□□□ 1.05
PKM-220ENST00000568459 MAP3K4Q9Y6R4 1608 aa21.59■■□□□ 1.05
PKM-220ENST00000568459 PPRC1Q5VV67 1664 aaKnown RBP21.58■■□□□ 1.05
PKM-220ENST00000568459 ATP10BO94823 1461 aa21.57■■□□□ 1.04
PKM-220ENST00000568459 ZNF316A6NFI3 1004 aaPredicted RBP21.55■■□□□ 1.04
PKM-220ENST00000568459 HNRNPUL2Q1KMD3 747 aaKnown RBP21.55■■□□□ 1.04
PKM-220ENST00000568459 TEX14Q8IWB6 1497 aa21.54■■□□□ 1.04
PKM-220ENST00000568459 CFAP43Q8NDM7 1665 aa21.51■■□□□ 1.03
PKM-220ENST00000568459 VPS8Q8N3P4 1428 aa21.5■■□□□ 1.03
PKM-220ENST00000568459 CD109Q6YHK3 1445 aa21.5■■□□□ 1.03
PKM-220ENST00000568459 AEBP2Q6ZN18 517 aaPredicted RBP21.49■■□□□ 1.03
PKM-220ENST00000568459 NUP153P49790 1475 aaKnown RBP21.49■■□□□ 1.03
PKM-220ENST00000568459 CLIP1P30622 1438 aa21.47■■□□□ 1.03
PKM-220ENST00000568459 MAGI3Q5TCQ9 1506 aa21.44■■□□□ 1.02
PKM-220ENST00000568459 PLEKHD1A6NEE1 506 aa21.43■■□□□ 1.02
PKM-220ENST00000568459 ARHGAP35Q9NRY4 1499 aa21.43■■□□□ 1.02
PKM-220ENST00000568459 GTF3C3Q9Y5Q9 886 aa21.42■■□□□ 1.02
PKM-220ENST00000568459 FMN1Q68DA7 1419 aa21.42■■□□□ 1.02
PKM-220ENST00000568459 MYT1Q01538 1121 aa21.41■■□□□ 1.02
PKM-220ENST00000568459 COL17A1Q9UMD9 1497 aaPredicted RBP21.4■■□□□ 1.02
PKM-220ENST00000568459 ATP1B4Q9UN42 357 aaPredicted RBP21.39■■□□□ 1.02
PKM-220ENST00000568459 CLSPNQ9HAW4 1339 aa21.39■■□□□ 1.01
PKM-220ENST00000568459 ABCA9Q8IUA7 1624 aa21.39■■□□□ 1.01
PKM-220ENST00000568459 HECW1Q76N89 1606 aa21.32■■□□□ 1
PKM-220ENST00000568459 CDK13Q14004 1512 aaKnown RBP21.31■■□□□ 1
PKM-220ENST00000568459 PHLDB1Q86UU1 1377 aa21.31■■□□□ 1
PKM-220ENST00000568459 CDK11AQ9UQ88 783 aaPredicted RBP21.29■■□□□ 1
PKM-220ENST00000568459 ARAP3Q8WWN8 1544 aa21.27■■□□□ 1
PKM-220ENST00000568459 APLP2Q06481 763 aa21.27■□□□□ 0.99
PKM-220ENST00000568459 NEO1Q92859 1461 aa21.25■□□□□ 0.99
PKM-220ENST00000568459 KDM4FA0A1W2PPD8 638 aa21.24■□□□□ 0.99
PKM-220ENST00000568459 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.24■□□□□ 0.991e-8■□□□□ 9.1
PKM-220ENST00000568459 CASKIN1Q8WXD9 1431 aa21.2■□□□□ 0.98
PKM-220ENST00000568459 LRRIQ1Q96JM4 1722 aa21.19■□□□□ 0.98
PKM-220ENST00000568459 TTC37Q6PGP7 1564 aa21.19■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms