RNA–Protein interactions for RNA: ENST00000568413.1

RPAP1-211, Transcript of RNA polymerase II associated protein 1, humanhuman

TSL 3

Gene RPAP1, Length 586 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1-211ENST00000568413 SHROOM2Q13796 1616 aa14.78□□□□□ -0.04
RPAP1-211ENST00000568413 EEA1Q15075 1411 aa14.78□□□□□ -0.04
RPAP1-211ENST00000568413 CSRNP3Q8WYN3 585 aa14.77□□□□□ -0.05
RPAP1-211ENST00000568413 CUL7Q14999 1698 aa14.77□□□□□ -0.05
RPAP1-211ENST00000568413 FAM9AQ8IZU1 332 aaPredicted RBP14.73□□□□□ -0.05
RPAP1-211ENST00000568413 PRG4Q92954 1404 aaPredicted RBP14.7□□□□□ -0.06
RPAP1-211ENST00000568413 RAPGEF2Q9Y4G8 1499 aa14.69□□□□□ -0.06
RPAP1-211ENST00000568413 PRXQ9BXM0 1461 aa14.67□□□□□ -0.06
RPAP1-211ENST00000568413 JPH4Q96JJ6 628 aa14.65□□□□□ -0.06
RPAP1-211ENST00000568413 KIF13AQ9H1H9 1805 aa14.64□□□□□ -0.07
RPAP1-211ENST00000568413 KIAA0586Q9BVV6 1533 aa14.61□□□□□ -0.07
RPAP1-211ENST00000568413 ADCY10Q96PN6 1610 aa14.58□□□□□ -0.08
RPAP1-211ENST00000568413 KIF21BO75037 1637 aa14.56□□□□□ -0.08
RPAP1-211ENST00000568413 TTBK1Q5TCY1 1321 aaPredicted RBP14.54□□□□□ -0.08
RPAP1-211ENST00000568413 UBTFP17480 764 aaKnown RBP14.53□□□□□ -0.08
RPAP1-211ENST00000568413 IQGAP2Q13576 1575 aa14.51□□□□□ -0.09
RPAP1-211ENST00000568413 GOLGA3Q08378 1498 aa14.51□□□□□ -0.09
RPAP1-211ENST00000568413 EHMT2Q96KQ7 1210 aa14.51□□□□□ -0.09
RPAP1-211ENST00000568413 DIP2BQ9P265 1576 aa14.5□□□□□ -0.09
RPAP1-211ENST00000568413 CTTNBP2Q8WZ74 1663 aa14.49□□□□□ -0.09
RPAP1-211ENST00000568413 FAM69CQ0P6D2 419 aa14.49□□□□□ -0.09
RPAP1-211ENST00000568413 ABCC10Q5T3U5 1492 aa14.49□□□□□ -0.09
RPAP1-211ENST00000568413 TSPOAP1O95153 1857 aa14.48□□□□□ -0.09
RPAP1-211ENST00000568413 MAPKBP1O60336 1514 aa14.48□□□□□ -0.09
RPAP1-211ENST00000568413 AEBP2Q6ZN18 517 aaPredicted RBP14.48□□□□□ -0.09
RPAP1-211ENST00000568413 NPM1P06748 294 aaKnown RBP eCLIP14.47□□□□□ -0.09
RPAP1-211ENST00000568413 CARMIL2Q6F5E8 1435 aa14.47□□□□□ -0.09
RPAP1-211ENST00000568413 UGGT2Q9NYU1 1516 aa14.46□□□□□ -0.1
RPAP1-211ENST00000568413 PTPRGP23470 1445 aa14.44□□□□□ -0.1
RPAP1-211ENST00000568413 TNIKQ9UKE5 1360 aa14.41□□□□□ -0.1
RPAP1-211ENST00000568413 DISP1Q96F81 1524 aa14.41□□□□□ -0.1
RPAP1-211ENST00000568413 RANGAP1P46060 587 aaPredicted RBP14.4□□□□□ -0.1
RPAP1-211ENST00000568413 LOC105371045A0A1W2PR82 267 aa14.38□□□□□ -0.11
RPAP1-211ENST00000568413 KDM6BO15054 1643 aa14.37□□□□□ -0.11
RPAP1-211ENST00000568413 ABCC2Q92887 1545 aa14.37□□□□□ -0.11
RPAP1-211ENST00000568413 P3H3Q8IVL6 736 aa14.36□□□□□ -0.11
RPAP1-211ENST00000568413 KIAA0556O60303 1618 aa14.36□□□□□ -0.11
RPAP1-211ENST00000568413 ASXL2Q76L83 1435 aa14.34□□□□□ -0.11
RPAP1-211ENST00000568413 PPRC1Q5VV67 1664 aaKnown RBP14.34□□□□□ -0.11
RPAP1-211ENST00000568413 UACAQ9BZF9 1416 aa14.33□□□□□ -0.11
RPAP1-211ENST00000568413 SAMD9Q5K651 1589 aa14.32□□□□□ -0.12
RPAP1-211ENST00000568413 ZCCHC11Q5TAX3 1644 aaKnown RBP14.32□□□□□ -0.12
RPAP1-211ENST00000568413 UHRF1BP1LA0JNW5 1464 aa14.31□□□□□ -0.12
RPAP1-211ENST00000568413 EFCAB5A4FU69 1503 aa14.31□□□□□ -0.12
RPAP1-211ENST00000568413 PLB1Q6P1J6 1458 aa14.29□□□□□ -0.12
RPAP1-211ENST00000568413 GLI2P10070 1586 aa14.27□□□□□ -0.12
RPAP1-211ENST00000568413 KDM5BQ9UGL1 1544 aa14.27□□□□□ -0.12
RPAP1-211ENST00000568413 ARHGAP35Q9NRY4 1499 aa14.27□□□□□ -0.12
RPAP1-211ENST00000568413 CLIP1P30622 1438 aa14.27□□□□□ -0.12
RPAP1-211ENST00000568413 FHOD3Q2V2M9 1422 aa14.27□□□□□ -0.12
RPAP1-211ENST00000568413 EPRSP07814 1512 aaKnown RBP14.26□□□□□ -0.13
RPAP1-211ENST00000568413 MAP3K4Q9Y6R4 1608 aa14.24□□□□□ -0.13
RPAP1-211ENST00000568413 CEP162Q5TB80 1403 aa14.24□□□□□ -0.13
RPAP1-211ENST00000568413 KDM4FA0A1W2PPD8 638 aa14.23□□□□□ -0.13
RPAP1-211ENST00000568413 FMN1Q68DA7 1419 aa14.23□□□□□ -0.13
RPAP1-211ENST00000568413 COL17A1Q9UMD9 1497 aaPredicted RBP14.22□□□□□ -0.13
RPAP1-211ENST00000568413 ABCA8O94911 1581 aa14.21□□□□□ -0.14
RPAP1-211ENST00000568413 WDR7Q9Y4E6 1490 aa14.19□□□□□ -0.14
RPAP1-211ENST00000568413 ARID3CA6NKF2 412 aa14.19□□□□□ -0.14
RPAP1-211ENST00000568413 RAPGEF6Q8TEU7 1601 aa14.16□□□□□ -0.14
RPAP1-211ENST00000568413 ATP1B4Q9UN42 357 aaPredicted RBP14.16□□□□□ -0.14
RPAP1-211ENST00000568413 TEX14Q8IWB6 1497 aa14.14□□□□□ -0.15
RPAP1-211ENST00000568413 KCNH8Q96L42 1107 aa14.14□□□□□ -0.15
RPAP1-211ENST00000568413 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.13□□□□□ -0.15
RPAP1-211ENST00000568413 HNRNPUL2Q1KMD3 747 aaKnown RBP14.13□□□□□ -0.15
RPAP1-211ENST00000568413 ATP10BO94823 1461 aa14.12□□□□□ -0.15
RPAP1-211ENST00000568413 ADGRL1O94910 1474 aa14.12□□□□□ -0.15
RPAP1-211ENST00000568413 CFAP43Q8NDM7 1665 aa14.12□□□□□ -0.15
RPAP1-211ENST00000568413 NUP153P49790 1475 aaKnown RBP14.12□□□□□ -0.15
RPAP1-211ENST00000568413 CASKIN1Q8WXD9 1431 aa14.11□□□□□ -0.15
RPAP1-211ENST00000568413 CD109Q6YHK3 1445 aa14.1□□□□□ -0.15
RPAP1-211ENST00000568413 HECW1Q76N89 1606 aa14.08□□□□□ -0.15
RPAP1-211ENST00000568413 PLEKHD1A6NEE1 506 aa14.08□□□□□ -0.16
RPAP1-211ENST00000568413 CDK11AQ9UQ88 783 aaPredicted RBP14.08□□□□□ -0.16
RPAP1-211ENST00000568413 FYCO1Q9BQS8 1478 aa14.07□□□□□ -0.16
RPAP1-211ENST00000568413 MAGI3Q5TCQ9 1506 aa14.07□□□□□ -0.16
RPAP1-211ENST00000568413 VPS8Q8N3P4 1428 aa14.06□□□□□ -0.16
RPAP1-211ENST00000568413 PCF11O94913 1555 aaKnown RBP14.05□□□□□ -0.16
RPAP1-211ENST00000568413 CCDC18Q5T9S5 1454 aa14.03□□□□□ -0.16
RPAP1-211ENST00000568413 CDK13Q14004 1512 aaKnown RBP14.02□□□□□ -0.16
RPAP1-211ENST00000568413 ABCA9Q8IUA7 1624 aa14.01□□□□□ -0.17
RPAP1-211ENST00000568413 APLP2Q06481 763 aa13.98□□□□□ -0.17
RPAP1-211ENST00000568413 LRRIQ1Q96JM4 1722 aa13.98□□□□□ -0.17
RPAP1-211ENST00000568413 TROQ12816 1431 aaPredicted RBP13.96□□□□□ -0.18
RPAP1-211ENST00000568413 HECW2Q9P2P5 1572 aa13.96□□□□□ -0.18
RPAP1-211ENST00000568413 ARAP3Q8WWN8 1544 aa13.95□□□□□ -0.18
RPAP1-211ENST00000568413 FRMPD1Q5SYB0 1578 aa13.94□□□□□ -0.18
RPAP1-211ENST00000568413 MTUS2Q5JR59 1369 aa13.94□□□□□ -0.18
RPAP1-211ENST00000568413 RAPGEF3O95398 923 aa13.93□□□□□ -0.18
RPAP1-211ENST00000568413 MAP3K1Q13233 1512 aa13.92□□□□□ -0.18
RPAP1-211ENST00000568413 TTC37Q6PGP7 1564 aa13.91□□□□□ -0.18
RPAP1-211ENST00000568413 TIAM1Q13009 1591 aa13.9□□□□□ -0.18
RPAP1-211ENST00000568413 NEO1Q92859 1461 aa13.89□□□□□ -0.19
RPAP1-211ENST00000568413 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.89□□□□□ -0.19
RPAP1-211ENST00000568413 KIF14Q15058 1648 aa13.88□□□□□ -0.19
RPAP1-211ENST00000568413 KANK4Q5T7N3 995 aaPredicted RBP13.87□□□□□ -0.19
RPAP1-211ENST00000568413 RICTORQ6R327 1708 aa13.87□□□□□ -0.19
RPAP1-211ENST00000568413 LRRC9Q6ZRR7 1453 aa13.87□□□□□ -0.19
RPAP1-211ENST00000568413 EHBP1L1Q8N3D4 1523 aa13.86□□□□□ -0.19
RPAP1-211ENST00000568413 ADAMTSL3P82987 1691 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms