RNA–Protein interactions for RNA: ENST00000568158.1

CNOT1-213, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-213ENST00000568158 CYB5RLQ6IPT4 315 aa21.85■■□□□ 1.09
CNOT1-213ENST00000568158 JPH4Q96JJ6 628 aa21.81■■□□□ 1.08
CNOT1-213ENST00000568158 FAM9AQ8IZU1 332 aaPredicted RBP21.8■■□□□ 1.08
CNOT1-213ENST00000568158 CSRNP3Q8WYN3 585 aa21.78■■□□□ 1.08
CNOT1-213ENST00000568158 FOXD1Q16676 465 aa21.76■■□□□ 1.07
CNOT1-213ENST00000568158 RAPGEF2Q9Y4G8 1499 aa21.76■■□□□ 1.07
CNOT1-213ENST00000568158 ARAP1Q96P48 1450 aa21.75■■□□□ 1.07
CNOT1-213ENST00000568158 ERCC6L2Q5T890 1561 aa21.73■■□□□ 1.07
CNOT1-213ENST00000568158 KIAA0586Q9BVV6 1533 aa21.72■■□□□ 1.07
CNOT1-213ENST00000568158 PRG4Q92954 1404 aaPredicted RBP21.7■■□□□ 1.06
CNOT1-213ENST00000568158 SHROOM2Q13796 1616 aa21.69■■□□□ 1.06
CNOT1-213ENST00000568158 PRXQ9BXM0 1461 aa21.69■■□□□ 1.06
CNOT1-213ENST00000568158 EEA1Q15075 1411 aa21.66■■□□□ 1.06
CNOT1-213ENST00000568158 POTEDQ86YR6 584 aa21.61■■□□□ 1.05
CNOT1-213ENST00000568158 IQGAP2Q13576 1575 aa21.57■■□□□ 1.04
CNOT1-213ENST00000568158 EHMT2Q96KQ7 1210 aa21.56■■□□□ 1.04
CNOT1-213ENST00000568158 TTBK1Q5TCY1 1321 aaPredicted RBP21.55■■□□□ 1.04
CNOT1-213ENST00000568158 CARMIL2Q6F5E8 1435 aa21.49■■□□□ 1.03
CNOT1-213ENST00000568158 CTTNBP2Q8WZ74 1663 aa21.49■■□□□ 1.03
CNOT1-213ENST00000568158 DISP1Q96F81 1524 aa21.46■■□□□ 1.03
CNOT1-213ENST00000568158 UGGT2Q9NYU1 1516 aa21.46■■□□□ 1.03
CNOT1-213ENST00000568158 PTPRGP23470 1445 aa21.46■■□□□ 1.03
CNOT1-213ENST00000568158 TNIKQ9UKE5 1360 aa21.44■■□□□ 1.02
CNOT1-213ENST00000568158 RANGAP1P46060 587 aaPredicted RBP21.43■■□□□ 1.02
CNOT1-213ENST00000568158 KIF21BO75037 1637 aa21.42■■□□□ 1.02
CNOT1-213ENST00000568158 UBTFP17480 764 aaKnown RBP21.42■■□□□ 1.02
CNOT1-213ENST00000568158 P3H3Q8IVL6 736 aa21.41■■□□□ 1.02
CNOT1-213ENST00000568158 TRHP20396 242 aaPredicted RBP21.39■■□□□ 1.01
CNOT1-213ENST00000568158 KIAA0556O60303 1618 aa21.37■■□□□ 1.01
CNOT1-213ENST00000568158 NPM1P06748 294 aaKnown RBP eCLIP21.35■■□□□ 1.01
CNOT1-213ENST00000568158 GOLGA3Q08378 1498 aa21.34■■□□□ 1.01
CNOT1-213ENST00000568158 ADCY10Q96PN6 1610 aa21.31■■□□□ 1
CNOT1-213ENST00000568158 UACAQ9BZF9 1416 aa21.28■■□□□ 1
CNOT1-213ENST00000568158 SAMD9Q5K651 1589 aa21.23■□□□□ 0.99
CNOT1-213ENST00000568158 PLB1Q6P1J6 1458 aa21.22■□□□□ 0.99
CNOT1-213ENST00000568158 UHRF1BP1LA0JNW5 1464 aa21.21■□□□□ 0.99
CNOT1-213ENST00000568158 ABCC2Q92887 1545 aa21.19■□□□□ 0.98
CNOT1-213ENST00000568158 FHOD3Q2V2M9 1422 aa21.18■□□□□ 0.98
CNOT1-213ENST00000568158 LOC105371045A0A1W2PR82 267 aa21.16■□□□□ 0.98
CNOT1-213ENST00000568158 ABCA8O94911 1581 aa21.15■□□□□ 0.98
CNOT1-213ENST00000568158 ARID3CA6NKF2 412 aa21.15■□□□□ 0.98
CNOT1-213ENST00000568158 FAM69CQ0P6D2 419 aa21.14■□□□□ 0.97
CNOT1-213ENST00000568158 KDM5BQ9UGL1 1544 aa21.13■□□□□ 0.97
CNOT1-213ENST00000568158 MAPKBP1O60336 1514 aa21.12■□□□□ 0.97
CNOT1-213ENST00000568158 EFCAB5A4FU69 1503 aa21.1■□□□□ 0.97
CNOT1-213ENST00000568158 ARHGAP35Q9NRY4 1499 aa21.1■□□□□ 0.97
CNOT1-213ENST00000568158 ASXL2Q76L83 1435 aa21.09■□□□□ 0.97
CNOT1-213ENST00000568158 ZCCHC11Q5TAX3 1644 aaKnown RBP21.08■□□□□ 0.97
CNOT1-213ENST00000568158 ABCC10Q5T3U5 1492 aa21.07■□□□□ 0.96
CNOT1-213ENST00000568158 KIF13AQ9H1H9 1805 aa21.06■□□□□ 0.96
CNOT1-213ENST00000568158 ATP10BO94823 1461 aa21.05■□□□□ 0.96
CNOT1-213ENST00000568158 RAPGEF6Q8TEU7 1601 aa21.04■□□□□ 0.96
CNOT1-213ENST00000568158 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.04■□□□□ 0.96
CNOT1-213ENST00000568158 HNRNPUL2Q1KMD3 747 aaKnown RBP21.04■□□□□ 0.96
CNOT1-213ENST00000568158 ATP1B4Q9UN42 357 aaPredicted RBP21.03■□□□□ 0.96
CNOT1-213ENST00000568158 KCNH8Q96L42 1107 aa21.02■□□□□ 0.96
CNOT1-213ENST00000568158 DIP2BQ9P265 1576 aa21.01■□□□□ 0.95
CNOT1-213ENST00000568158 CLIP1P30622 1438 aa20.99■□□□□ 0.95
CNOT1-213ENST00000568158 NUP153P49790 1475 aaKnown RBP20.98■□□□□ 0.95
CNOT1-213ENST00000568158 FMN1Q68DA7 1419 aa20.96■□□□□ 0.95
CNOT1-213ENST00000568158 EPRSP07814 1512 aaKnown RBP20.95■□□□□ 0.94
CNOT1-213ENST00000568158 WDR7Q9Y4E6 1490 aa20.94■□□□□ 0.94
CNOT1-213ENST00000568158 TSPOAP1O95153 1857 aa20.93■□□□□ 0.94
CNOT1-213ENST00000568158 PLEKHD1A6NEE1 506 aa20.91■□□□□ 0.94
CNOT1-213ENST00000568158 GLI2P10070 1586 aa20.9■□□□□ 0.94
CNOT1-213ENST00000568158 CEP162Q5TB80 1403 aa20.89■□□□□ 0.94
CNOT1-213ENST00000568158 CDK13Q14004 1512 aaKnown RBP20.86■□□□□ 0.93
CNOT1-213ENST00000568158 CASKIN1Q8WXD9 1431 aa20.83■□□□□ 0.93
CNOT1-213ENST00000568158 HECW1Q76N89 1606 aa20.82■□□□□ 0.92
CNOT1-213ENST00000568158 CD109Q6YHK3 1445 aa20.81■□□□□ 0.92
CNOT1-213ENST00000568158 MAP3K4Q9Y6R4 1608 aa20.81■□□□□ 0.92
CNOT1-213ENST00000568158 PPRC1Q5VV67 1664 aaKnown RBP20.8■□□□□ 0.92
CNOT1-213ENST00000568158 CDK11AQ9UQ88 783 aaPredicted RBP20.79■□□□□ 0.92
CNOT1-213ENST00000568158 PCF11O94913 1555 aaKnown RBP20.79■□□□□ 0.92
CNOT1-213ENST00000568158 LRRIQ1Q96JM4 1722 aa20.78■□□□□ 0.92
CNOT1-213ENST00000568158 CFAP43Q8NDM7 1665 aa20.74■□□□□ 0.91
CNOT1-213ENST00000568158 FYCO1Q9BQS8 1478 aa20.73■□□□□ 0.91
CNOT1-213ENST00000568158 ABCA9Q8IUA7 1624 aa20.71■□□□□ 0.91
CNOT1-213ENST00000568158 MAGI3Q5TCQ9 1506 aa20.71■□□□□ 0.91
CNOT1-213ENST00000568158 TEX14Q8IWB6 1497 aa20.7■□□□□ 0.9
CNOT1-213ENST00000568158 CCDC18Q5T9S5 1454 aa20.69■□□□□ 0.9
CNOT1-213ENST00000568158 COL17A1Q9UMD9 1497 aaPredicted RBP20.69■□□□□ 0.9
CNOT1-213ENST00000568158 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.68■□□□□ 0.9
CNOT1-213ENST00000568158 KDM6BO15054 1643 aa20.68■□□□□ 0.9
CNOT1-213ENST00000568158 TROQ12816 1431 aaPredicted RBP20.68■□□□□ 0.9
CNOT1-213ENST00000568158 MSH5O43196 834 aa20.63■□□□□ 0.89
CNOT1-213ENST00000568158 VPS8Q8N3P4 1428 aa20.62■□□□□ 0.89
CNOT1-213ENST00000568158 TTC37Q6PGP7 1564 aa20.62■□□□□ 0.89
CNOT1-213ENST00000568158 KIF14Q15058 1648 aa20.61■□□□□ 0.89
CNOT1-213ENST00000568158 PLCH2O75038 1416 aa20.59■□□□□ 0.89
CNOT1-213ENST00000568158 RAPGEF3O95398 923 aa20.56■□□□□ 0.88
CNOT1-213ENST00000568158 MTUS2Q5JR59 1369 aa20.56■□□□□ 0.88
CNOT1-213ENST00000568158 PHLDB1Q86UU1 1377 aa20.56■□□□□ 0.88
CNOT1-213ENST00000568158 NEO1Q92859 1461 aa20.56■□□□□ 0.88
CNOT1-213ENST00000568158 AKNAQ7Z591 1439 aa20.55■□□□□ 0.88
CNOT1-213ENST00000568158 EFCAB2Q5VUJ9 269 aa20.55■□□□□ 0.88
CNOT1-213ENST00000568158 FANCAO15360 1455 aa20.54■□□□□ 0.88
CNOT1-213ENST00000568158 ARAP3Q8WWN8 1544 aa20.53■□□□□ 0.88
CNOT1-213ENST00000568158 KANK4Q5T7N3 995 aaPredicted RBP20.51■□□□□ 0.87
CNOT1-213ENST00000568158 MYO5CQ9NQX4 1742 aa20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms