RNA–Protein interactions for RNA: ENST00000568006.1

GBP3-211, Transcript of guanylate binding protein 3, humanhuman

TSL 5

Gene GBP3, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GBP3-211ENST00000568006 NUP160Q12769 1436 aa12.71□□□□□ -0.37
GBP3-211ENST00000568006 KIF27Q86VH2 1401 aa12.71□□□□□ -0.37
GBP3-211ENST00000568006 CEP170Q5SW79 1584 aa12.7□□□□□ -0.38
GBP3-211ENST00000568006 CUL7Q14999 1698 aa12.7□□□□□ -0.38
GBP3-211ENST00000568006 IGF1RP08069 1367 aa12.69□□□□□ -0.38
GBP3-211ENST00000568006 SHROOM2Q13796 1616 aa12.66□□□□□ -0.38
GBP3-211ENST00000568006 ARAP1Q96P48 1450 aa12.64□□□□□ -0.39
GBP3-211ENST00000568006 RUSC2Q8N2Y8 1516 aa12.62□□□□□ -0.39
GBP3-211ENST00000568006 CARMIL1Q5VZK9 1371 aa12.58□□□□□ -0.4
GBP3-211ENST00000568006 TRIM41Q8WV44 630 aa12.58□□□□□ -0.4
GBP3-211ENST00000568006 ERCC6L2Q5T890 1561 aa12.57□□□□□ -0.4
GBP3-211ENST00000568006 KIAA0586Q9BVV6 1533 aa12.56□□□□□ -0.4
GBP3-211ENST00000568006 PPP4R3CPQ6ZMV5 832 aa12.54□□□□□ -0.4
GBP3-211ENST00000568006 RAPGEF2Q9Y4G8 1499 aa12.53□□□□□ -0.4
GBP3-211ENST00000568006 MAPK8IP2Q13387 824 aaPredicted RBP12.53□□□□□ -0.4
GBP3-211ENST00000568006 PRXQ9BXM0 1461 aa12.52□□□□□ -0.41
GBP3-211ENST00000568006 CYB5RLQ6IPT4 315 aa12.51□□□□□ -0.41
GBP3-211ENST00000568006 JPH4Q96JJ6 628 aa12.5□□□□□ -0.41
GBP3-211ENST00000568006 PRG4Q92954 1404 aaPredicted RBP12.5□□□□□ -0.41
GBP3-211ENST00000568006 IQGAP2Q13576 1575 aa12.48□□□□□ -0.41
GBP3-211ENST00000568006 EEA1Q15075 1411 aa12.48□□□□□ -0.41
GBP3-211ENST00000568006 DMRT2Q9Y5R5 561 aa12.47□□□□□ -0.41
GBP3-211ENST00000568006 CTTNBP2Q8WZ74 1663 aa12.46□□□□□ -0.41
GBP3-211ENST00000568006 UGGT2Q9NYU1 1516 aa12.44□□□□□ -0.42
GBP3-211ENST00000568006 DISP1Q96F81 1524 aa12.42□□□□□ -0.42
GBP3-211ENST00000568006 CSRNP3Q8WYN3 585 aa12.41□□□□□ -0.42
GBP3-211ENST00000568006 KIAA0556O60303 1618 aa12.39□□□□□ -0.43
GBP3-211ENST00000568006 KIF21BO75037 1637 aa12.39□□□□□ -0.43
GBP3-211ENST00000568006 CARMIL2Q6F5E8 1435 aa12.37□□□□□ -0.43
GBP3-211ENST00000568006 ADCY10Q96PN6 1610 aa12.37□□□□□ -0.43
GBP3-211ENST00000568006 TNIKQ9UKE5 1360 aa12.36□□□□□ -0.43
GBP3-211ENST00000568006 PTPRGP23470 1445 aa12.33□□□□□ -0.44
GBP3-211ENST00000568006 UHRF1BP1LA0JNW5 1464 aa12.32□□□□□ -0.44
GBP3-211ENST00000568006 GOLGA3Q08378 1498 aa12.32□□□□□ -0.44
GBP3-211ENST00000568006 MAPKBP1O60336 1514 aa12.32□□□□□ -0.44
GBP3-211ENST00000568006 SAMD9Q5K651 1589 aa12.31□□□□□ -0.44
GBP3-211ENST00000568006 CNKSR2Q8WXI2 1034 aa12.29□□□□□ -0.44
GBP3-211ENST00000568006 ABCC2Q92887 1545 aa12.28□□□□□ -0.44
GBP3-211ENST00000568006 UACAQ9BZF9 1416 aa12.28□□□□□ -0.44
GBP3-211ENST00000568006 FAM9AQ8IZU1 332 aaPredicted RBP12.27□□□□□ -0.45
GBP3-211ENST00000568006 KIF13AQ9H1H9 1805 aa12.27□□□□□ -0.45
GBP3-211ENST00000568006 ABCA8O94911 1581 aa12.26□□□□□ -0.45
GBP3-211ENST00000568006 KDM5BQ9UGL1 1544 aa12.25□□□□□ -0.45
GBP3-211ENST00000568006 NCBP3Q53F19 620 aaKnown RBP12.24□□□□□ -0.45
GBP3-211ENST00000568006 DIP2BQ9P265 1576 aa12.23□□□□□ -0.45
GBP3-211ENST00000568006 ABCC10Q5T3U5 1492 aa12.23□□□□□ -0.45
GBP3-211ENST00000568006 EFCAB5A4FU69 1503 aa12.22□□□□□ -0.45
GBP3-211ENST00000568006 PLB1Q6P1J6 1458 aa12.22□□□□□ -0.45
GBP3-211ENST00000568006 TRHP20396 242 aaPredicted RBP12.22□□□□□ -0.45
GBP3-211ENST00000568006 ZCCHC11Q5TAX3 1644 aaKnown RBP12.22□□□□□ -0.45
GBP3-211ENST00000568006 NPM1P06748 294 aaKnown RBP eCLIP12.2□□□□□ -0.46
GBP3-211ENST00000568006 GLI2P10070 1586 aa12.18□□□□□ -0.46
GBP3-211ENST00000568006 TTBK1Q5TCY1 1321 aaPredicted RBP12.17□□□□□ -0.46
GBP3-211ENST00000568006 RAPGEF6Q8TEU7 1601 aa12.17□□□□□ -0.46
GBP3-211ENST00000568006 ASXL2Q76L83 1435 aa12.17□□□□□ -0.46
GBP3-211ENST00000568006 FHOD3Q2V2M9 1422 aa12.15□□□□□ -0.46
GBP3-211ENST00000568006 ARHGAP35Q9NRY4 1499 aa12.14□□□□□ -0.47
GBP3-211ENST00000568006 EPRSP07814 1512 aaKnown RBP12.13□□□□□ -0.47
GBP3-211ENST00000568006 P3H3Q8IVL6 736 aa12.13□□□□□ -0.47
GBP3-211ENST00000568006 UBTFP17480 764 aaKnown RBP12.12□□□□□ -0.47
GBP3-211ENST00000568006 ATP10BO94823 1461 aa12.12□□□□□ -0.47
GBP3-211ENST00000568006 NUP153P49790 1475 aaKnown RBP12.12□□□□□ -0.47
GBP3-211ENST00000568006 WDR7Q9Y4E6 1490 aa12.12□□□□□ -0.47
GBP3-211ENST00000568006 PPRC1Q5VV67 1664 aaKnown RBP12.12□□□□□ -0.47
GBP3-211ENST00000568006 MAP3K4Q9Y6R4 1608 aa12.11□□□□□ -0.47
GBP3-211ENST00000568006 FAM69CQ0P6D2 419 aa12.11□□□□□ -0.47
GBP3-211ENST00000568006 RNF216Q9NWF9 866 aaPredicted RBP12.1□□□□□ -0.47
GBP3-211ENST00000568006 HOXD11P31277 338 aaPredicted RBP12.09□□□□□ -0.47
GBP3-211ENST00000568006 FMN1Q68DA7 1419 aa12.07□□□□□ -0.48
GBP3-211ENST00000568006 CFAP43Q8NDM7 1665 aa12.06□□□□□ -0.48
GBP3-211ENST00000568006 RANGAP1P46060 587 aaPredicted RBP12.06□□□□□ -0.48
GBP3-211ENST00000568006 EHMT2Q96KQ7 1210 aa12.06□□□□□ -0.48
GBP3-211ENST00000568006 TSPOAP1O95153 1857 aa12.06□□□□□ -0.48
GBP3-211ENST00000568006 HECW1Q76N89 1606 aa12.05□□□□□ -0.48
GBP3-211ENST00000568006 DCAF8L1A6NGE4 600 aa12.04□□□□□ -0.48
GBP3-211ENST00000568006 ABCA9Q8IUA7 1624 aa12.04□□□□□ -0.48
GBP3-211ENST00000568006 LRRIQ1Q96JM4 1722 aa12.03□□□□□ -0.48
GBP3-211ENST00000568006 MAGI3Q5TCQ9 1506 aa12.02□□□□□ -0.48
GBP3-211ENST00000568006 KDM6BO15054 1643 aa12.01□□□□□ -0.49
GBP3-211ENST00000568006 CLIP1P30622 1438 aa12.01□□□□□ -0.49
GBP3-211ENST00000568006 CDK13Q14004 1512 aaKnown RBP12.01□□□□□ -0.49
GBP3-211ENST00000568006 PCF11O94913 1555 aaKnown RBP12.01□□□□□ -0.49
GBP3-211ENST00000568006 TEX14Q8IWB6 1497 aa12□□□□□ -0.49
GBP3-211ENST00000568006 CASKIN1Q8WXD9 1431 aa11.99□□□□□ -0.49
GBP3-211ENST00000568006 CD109Q6YHK3 1445 aa11.98□□□□□ -0.49
GBP3-211ENST00000568006 ARID3CA6NKF2 412 aa11.98□□□□□ -0.49
GBP3-211ENST00000568006 KCNA4P22459 653 aa11.97□□□□□ -0.49
GBP3-211ENST00000568006 FYCO1Q9BQS8 1478 aa11.96□□□□□ -0.49
GBP3-211ENST00000568006 COL17A1Q9UMD9 1497 aaPredicted RBP11.96□□□□□ -0.49
GBP3-211ENST00000568006 CEP162Q5TB80 1403 aa11.96□□□□□ -0.49
GBP3-211ENST00000568006 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.96□□□□□ -0.5
GBP3-211ENST00000568006 KCNH8Q96L42 1107 aa11.95□□□□□ -0.5
GBP3-211ENST00000568006 CCDC18Q5T9S5 1454 aa11.95□□□□□ -0.5
GBP3-211ENST00000568006 TTC37Q6PGP7 1564 aa11.94□□□□□ -0.5
GBP3-211ENST00000568006 PLEKHD1A6NEE1 506 aa11.94□□□□□ -0.5
GBP3-211ENST00000568006 ARAP3Q8WWN8 1544 aa11.92□□□□□ -0.5
GBP3-211ENST00000568006 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.92□□□□□ -0.5
GBP3-211ENST00000568006 HNRNPUL2Q1KMD3 747 aaKnown RBP11.92□□□□□ -0.5
GBP3-211ENST00000568006 TROQ12816 1431 aaPredicted RBP11.92□□□□□ -0.5
GBP3-211ENST00000568006 NEO1Q92859 1461 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms