RNA–Protein interactions for RNA: ENST00000567966.1

LINC01228-201, Transcript of long intergenic non-protein coding RNA 1228, humanhuman

TSL 3 BASIC

Gene LINC01228, Length 623 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01228-201ENST00000567966 TRHP20396 242 aaPredicted RBP19.01■□□□□ 0.63
LINC01228-201ENST00000567966 SHROOM2Q13796 1616 aa18.92■□□□□ 0.62
LINC01228-201ENST00000567966 IGF1RP08069 1367 aa18.84■□□□□ 0.61
LINC01228-201ENST00000567966 JPH4Q96JJ6 628 aa18.83■□□□□ 0.6
LINC01228-201ENST00000567966 RUSC2Q8N2Y8 1516 aa18.83■□□□□ 0.6
LINC01228-201ENST00000567966 PRG4Q92954 1404 aaPredicted RBP18.83■□□□□ 0.6
LINC01228-201ENST00000567966 KIF27Q86VH2 1401 aa18.82■□□□□ 0.6
LINC01228-201ENST00000567966 ADRA2BP18089 450 aa18.81■□□□□ 0.6
LINC01228-201ENST00000567966 PPP6R1Q9UPN7 881 aa18.8■□□□□ 0.6
LINC01228-201ENST00000567966 CUL7Q14999 1698 aa18.77■□□□□ 0.6
LINC01228-201ENST00000567966 KIAA0586Q9BVV6 1533 aa18.72■□□□□ 0.59
LINC01228-201ENST00000567966 CARMIL1Q5VZK9 1371 aa18.7■□□□□ 0.58
LINC01228-201ENST00000567966 KIF13AQ9H1H9 1805 aa18.63■□□□□ 0.57
LINC01228-201ENST00000567966 ADCY10Q96PN6 1610 aa18.62■□□□□ 0.57
LINC01228-201ENST00000567966 IQGAP2Q13576 1575 aa18.56■□□□□ 0.56
LINC01228-201ENST00000567966 TTBK1Q5TCY1 1321 aaPredicted RBP18.56■□□□□ 0.56
LINC01228-201ENST00000567966 RAPGEF2Q9Y4G8 1499 aa18.54■□□□□ 0.56
LINC01228-201ENST00000567966 NPM1P06748 294 aaKnown RBP eCLIP18.54■□□□□ 0.56
LINC01228-201ENST00000567966 PTPRGP23470 1445 aa18.53■□□□□ 0.56
LINC01228-201ENST00000567966 MAPKBP1O60336 1514 aa18.53■□□□□ 0.56
LINC01228-201ENST00000567966 ABCC10Q5T3U5 1492 aa18.52■□□□□ 0.55
LINC01228-201ENST00000567966 CARMIL2Q6F5E8 1435 aa18.5■□□□□ 0.55
LINC01228-201ENST00000567966 FAM69CQ0P6D2 419 aa18.5■□□□□ 0.55
LINC01228-201ENST00000567966 TNIKQ9UKE5 1360 aa18.5■□□□□ 0.55
LINC01228-201ENST00000567966 DIP2BQ9P265 1576 aa18.5■□□□□ 0.55
LINC01228-201ENST00000567966 DISP1Q96F81 1524 aa18.49■□□□□ 0.55
LINC01228-201ENST00000567966 UGGT2Q9NYU1 1516 aa18.44■□□□□ 0.54
LINC01228-201ENST00000567966 ABCC2Q92887 1545 aa18.42■□□□□ 0.54
LINC01228-201ENST00000567966 CTTNBP2Q8WZ74 1663 aa18.41■□□□□ 0.54
LINC01228-201ENST00000567966 TSPOAP1O95153 1857 aa18.4■□□□□ 0.54
LINC01228-201ENST00000567966 KIAA0556O60303 1618 aa18.4■□□□□ 0.54
LINC01228-201ENST00000567966 UACAQ9BZF9 1416 aa18.39■□□□□ 0.53
LINC01228-201ENST00000567966 UHRF1BP1LA0JNW5 1464 aa18.39■□□□□ 0.53
LINC01228-201ENST00000567966 PRXQ9BXM0 1461 aa18.38■□□□□ 0.53
LINC01228-201ENST00000567966 ASXL2Q76L83 1435 aa18.36■□□□□ 0.53
LINC01228-201ENST00000567966 PIAS4Q8N2W9 510 aaPredicted RBP18.36■□□□□ 0.53
LINC01228-201ENST00000567966 EEA1Q15075 1411 aa18.35■□□□□ 0.53
LINC01228-201ENST00000567966 CSRNP3Q8WYN3 585 aa18.33■□□□□ 0.52
LINC01228-201ENST00000567966 KDM5BQ9UGL1 1544 aa18.32■□□□□ 0.52
LINC01228-201ENST00000567966 ZCCHC11Q5TAX3 1644 aaKnown RBP18.31■□□□□ 0.52
LINC01228-201ENST00000567966 PLB1Q6P1J6 1458 aa18.31■□□□□ 0.52
LINC01228-201ENST00000567966 KDM6BO15054 1643 aa18.3■□□□□ 0.52
LINC01228-201ENST00000567966 PPRC1Q5VV67 1664 aaKnown RBP18.29■□□□□ 0.52
LINC01228-201ENST00000567966 GLI2P10070 1586 aa18.28■□□□□ 0.52
LINC01228-201ENST00000567966 GOLGA3Q08378 1498 aa18.26■□□□□ 0.51
LINC01228-201ENST00000567966 EPRSP07814 1512 aaKnown RBP18.24■□□□□ 0.51
LINC01228-201ENST00000567966 ABCA8O94911 1581 aa18.24■□□□□ 0.51
LINC01228-201ENST00000567966 P3H3Q8IVL6 736 aa18.22■□□□□ 0.51
LINC01228-201ENST00000567966 MAP3K4Q9Y6R4 1608 aa18.21■□□□□ 0.51
LINC01228-201ENST00000567966 FAM9AQ8IZU1 332 aaPredicted RBP18.18■□□□□ 0.5
LINC01228-201ENST00000567966 WDR7Q9Y4E6 1490 aa18.18■□□□□ 0.5
LINC01228-201ENST00000567966 COL17A1Q9UMD9 1497 aaPredicted RBP18.16■□□□□ 0.5
LINC01228-201ENST00000567966 MSH5O43196 834 aa18.15■□□□□ 0.5
LINC01228-201ENST00000567966 SAMD9Q5K651 1589 aa18.14■□□□□ 0.49
LINC01228-201ENST00000567966 ARID3CA6NKF2 412 aa18.14■□□□□ 0.49
LINC01228-201ENST00000567966 KCNH8Q96L42 1107 aa18.13■□□□□ 0.49
LINC01228-201ENST00000567966 KDM4FA0A1W2PPD8 638 aa18.11■□□□□ 0.49
LINC01228-201ENST00000567966 RANGAP1P46060 587 aaPredicted RBP18.11■□□□□ 0.49
LINC01228-201ENST00000567966 ATP10BO94823 1461 aa18.09■□□□□ 0.49
LINC01228-201ENST00000567966 TEX14Q8IWB6 1497 aa18.09■□□□□ 0.49
LINC01228-201ENST00000567966 CFAP43Q8NDM7 1665 aa18.07■□□□□ 0.48
LINC01228-201ENST00000567966 CD109Q6YHK3 1445 aa18.06■□□□□ 0.48
LINC01228-201ENST00000567966 RAPGEF6Q8TEU7 1601 aa18.05■□□□□ 0.48
LINC01228-201ENST00000567966 KIF21BO75037 1637 aa18.05■□□□□ 0.48
LINC01228-201ENST00000567966 FHOD3Q2V2M9 1422 aa18.04■□□□□ 0.48
LINC01228-201ENST00000567966 MAGI3Q5TCQ9 1506 aa18.03■□□□□ 0.48
LINC01228-201ENST00000567966 EHMT2Q96KQ7 1210 aa18.02■□□□□ 0.48
LINC01228-201ENST00000567966 NUP153P49790 1475 aaKnown RBP17.99■□□□□ 0.47
LINC01228-201ENST00000567966 UBTFP17480 764 aaKnown RBP17.98■□□□□ 0.47
LINC01228-201ENST00000567966 ADGRL1O94910 1474 aa17.96■□□□□ 0.47
LINC01228-201ENST00000567966 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.96■□□□□ 0.47
LINC01228-201ENST00000567966 HNRNPUL2Q1KMD3 747 aaKnown RBP17.96■□□□□ 0.47
LINC01228-201ENST00000567966 ABCA9Q8IUA7 1624 aa17.96■□□□□ 0.47
LINC01228-201ENST00000567966 EFCAB5A4FU69 1503 aa17.93■□□□□ 0.46
LINC01228-201ENST00000567966 ARAP3Q8WWN8 1544 aa17.89■□□□□ 0.45
LINC01228-201ENST00000567966 CDK13Q14004 1512 aaKnown RBP17.86■□□□□ 0.45
LINC01228-201ENST00000567966 PLEKHD1A6NEE1 506 aa17.85■□□□□ 0.45
LINC01228-201ENST00000567966 ARHGAP35Q9NRY4 1499 aa17.85■□□□□ 0.45
LINC01228-201ENST00000567966 RAPGEF3O95398 923 aa17.84■□□□□ 0.45
LINC01228-201ENST00000567966 NEO1Q92859 1461 aa17.82■□□□□ 0.44
LINC01228-201ENST00000567966 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.82■□□□□ 0.44
LINC01228-201ENST00000567966 PHLDB1Q86UU1 1377 aa17.81■□□□□ 0.44
LINC01228-201ENST00000567966 FRMPD1Q5SYB0 1578 aa17.81■□□□□ 0.44
LINC01228-201ENST00000567966 TTC37Q6PGP7 1564 aa17.8■□□□□ 0.44
LINC01228-201ENST00000567966 ATP1B4Q9UN42 357 aaPredicted RBP17.79■□□□□ 0.44
LINC01228-201ENST00000567966 FMN1Q68DA7 1419 aa17.77■□□□□ 0.44
LINC01228-201ENST00000567966 LOC105371045A0A1W2PR82 267 aa17.76■□□□□ 0.43
LINC01228-201ENST00000567966 HECW1Q76N89 1606 aa17.76■□□□□ 0.43
LINC01228-201ENST00000567966 LRRIQ1Q96JM4 1722 aa17.75■□□□□ 0.43
LINC01228-201ENST00000567966 FANCAO15360 1455 aa17.75■□□□□ 0.43
LINC01228-201ENST00000567966 AKNAQ7Z591 1439 aa17.74■□□□□ 0.43
LINC01228-201ENST00000567966 RICTORQ6R327 1708 aa17.74■□□□□ 0.43
LINC01228-201ENST00000567966 DENND4BO75064 1496 aaPredicted RBP17.72■□□□□ 0.43
LINC01228-201ENST00000567966 CFAP74Q9C0B2 1584 aa17.71■□□□□ 0.43
LINC01228-201ENST00000567966 HECW2Q9P2P5 1572 aa17.7■□□□□ 0.42
LINC01228-201ENST00000567966 KIF14Q15058 1648 aa17.69■□□□□ 0.42
LINC01228-201ENST00000567966 ADAMTSL3P82987 1691 aa17.69■□□□□ 0.42
LINC01228-201ENST00000567966 PLCH2O75038 1416 aa17.68■□□□□ 0.42
LINC01228-201ENST00000567966 ARHGEF40Q8TER5 1519 aa17.67■□□□□ 0.42
LINC01228-201ENST00000567966 BCORL1Q5H9F3 1711 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms