RNA–Protein interactions for RNA: ENST00000567910.1

ABCA3-205, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 1 (best) BASIC

Gene ABCA3, Length 1,205 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-205ENST00000567910 PRXQ9BXM0 1461 aa17.95■□□□□ 0.46
ABCA3-205ENST00000567910 RAPGEF2Q9Y4G8 1499 aa17.94■□□□□ 0.46
ABCA3-205ENST00000567910 KIAA0586Q9BVV6 1533 aa17.92■□□□□ 0.46
ABCA3-205ENST00000567910 CYB5RLQ6IPT4 315 aa17.86■□□□□ 0.45
ABCA3-205ENST00000567910 JPH4Q96JJ6 628 aa17.86■□□□□ 0.45
ABCA3-205ENST00000567910 EEA1Q15075 1411 aa17.86■□□□□ 0.45
ABCA3-205ENST00000567910 PRG4Q92954 1404 aaPredicted RBP17.86■□□□□ 0.45
ABCA3-205ENST00000567910 CSRNP3Q8WYN3 585 aa17.85■□□□□ 0.45
ABCA3-205ENST00000567910 IQGAP2Q13576 1575 aa17.84■□□□□ 0.45
ABCA3-205ENST00000567910 FAM9AQ8IZU1 332 aaPredicted RBP17.82■□□□□ 0.44
ABCA3-205ENST00000567910 CTTNBP2Q8WZ74 1663 aa17.81■□□□□ 0.44
ABCA3-205ENST00000567910 DISP1Q96F81 1524 aa17.77■□□□□ 0.43
ABCA3-205ENST00000567910 UGGT2Q9NYU1 1516 aa17.77■□□□□ 0.43
ABCA3-205ENST00000567910 KIF21BO75037 1637 aa17.76■□□□□ 0.43
ABCA3-205ENST00000567910 KIAA0556O60303 1618 aa17.7■□□□□ 0.42
ABCA3-205ENST00000567910 ADCY10Q96PN6 1610 aa17.66■□□□□ 0.42
ABCA3-205ENST00000567910 CARMIL2Q6F5E8 1435 aa17.64■□□□□ 0.42
ABCA3-205ENST00000567910 TNIKQ9UKE5 1360 aa17.64■□□□□ 0.41
ABCA3-205ENST00000567910 PTPRGP23470 1445 aa17.62■□□□□ 0.41
ABCA3-205ENST00000567910 SAMD9Q5K651 1589 aa17.62■□□□□ 0.41
ABCA3-205ENST00000567910 GOLGA3Q08378 1498 aa17.61■□□□□ 0.41
ABCA3-205ENST00000567910 EHMT2Q96KQ7 1210 aa17.59■□□□□ 0.41
ABCA3-205ENST00000567910 TTBK1Q5TCY1 1321 aaPredicted RBP17.56■□□□□ 0.4
ABCA3-205ENST00000567910 UHRF1BP1LA0JNW5 1464 aa17.53■□□□□ 0.4
ABCA3-205ENST00000567910 ABCC2Q92887 1545 aa17.52■□□□□ 0.4
ABCA3-205ENST00000567910 PLB1Q6P1J6 1458 aa17.52■□□□□ 0.4
ABCA3-205ENST00000567910 UACAQ9BZF9 1416 aa17.52■□□□□ 0.4
ABCA3-205ENST00000567910 ABCA8O94911 1581 aa17.52■□□□□ 0.39
ABCA3-205ENST00000567910 P3H3Q8IVL6 736 aa17.51■□□□□ 0.39
ABCA3-205ENST00000567910 MAPKBP1O60336 1514 aa17.49■□□□□ 0.39
ABCA3-205ENST00000567910 UBTFP17480 764 aaKnown RBP17.49■□□□□ 0.39
ABCA3-205ENST00000567910 FHOD3Q2V2M9 1422 aa17.48■□□□□ 0.39
ABCA3-205ENST00000567910 RANGAP1P46060 587 aaPredicted RBP17.48■□□□□ 0.39
ABCA3-205ENST00000567910 EFCAB5A4FU69 1503 aa17.47■□□□□ 0.39
ABCA3-205ENST00000567910 ARHGAP35Q9NRY4 1499 aa17.46■□□□□ 0.39
ABCA3-205ENST00000567910 KDM5BQ9UGL1 1544 aa17.46■□□□□ 0.39
ABCA3-205ENST00000567910 KIF13AQ9H1H9 1805 aa17.45■□□□□ 0.38
ABCA3-205ENST00000567910 ZCCHC11Q5TAX3 1644 aaKnown RBP17.45■□□□□ 0.38
ABCA3-205ENST00000567910 TRHP20396 242 aaPredicted RBP17.41■□□□□ 0.38
ABCA3-205ENST00000567910 DIP2BQ9P265 1576 aa17.4■□□□□ 0.38
ABCA3-205ENST00000567910 RAPGEF6Q8TEU7 1601 aa17.4■□□□□ 0.38
ABCA3-205ENST00000567910 ABCC10Q5T3U5 1492 aa17.39■□□□□ 0.37
ABCA3-205ENST00000567910 ASXL2Q76L83 1435 aa17.38■□□□□ 0.37
ABCA3-205ENST00000567910 NPM1P06748 294 aaKnown RBP eCLIP17.37■□□□□ 0.37
ABCA3-205ENST00000567910 NUP153P49790 1475 aaKnown RBP17.37■□□□□ 0.37
ABCA3-205ENST00000567910 ATP10BO94823 1461 aa17.35■□□□□ 0.37
ABCA3-205ENST00000567910 LOC105371045A0A1W2PR82 267 aa17.33■□□□□ 0.36
ABCA3-205ENST00000567910 ARID3CA6NKF2 412 aa17.32■□□□□ 0.36
ABCA3-205ENST00000567910 EPRSP07814 1512 aaKnown RBP17.3■□□□□ 0.36
ABCA3-205ENST00000567910 WDR7Q9Y4E6 1490 aa17.3■□□□□ 0.36
ABCA3-205ENST00000567910 CLIP1P30622 1438 aa17.3■□□□□ 0.36
ABCA3-205ENST00000567910 FAM69CQ0P6D2 419 aa17.29■□□□□ 0.36
ABCA3-205ENST00000567910 LRRIQ1Q96JM4 1722 aa17.29■□□□□ 0.36
ABCA3-205ENST00000567910 GLI2P10070 1586 aa17.28■□□□□ 0.36
ABCA3-205ENST00000567910 PPRC1Q5VV67 1664 aaKnown RBP17.27■□□□□ 0.36
ABCA3-205ENST00000567910 FMN1Q68DA7 1419 aa17.27■□□□□ 0.35
ABCA3-205ENST00000567910 CDK13Q14004 1512 aaKnown RBP17.26■□□□□ 0.35
ABCA3-205ENST00000567910 PCF11O94913 1555 aaKnown RBP17.25■□□□□ 0.35
ABCA3-205ENST00000567910 CEP162Q5TB80 1403 aa17.25■□□□□ 0.35
ABCA3-205ENST00000567910 MAP3K4Q9Y6R4 1608 aa17.25■□□□□ 0.35
ABCA3-205ENST00000567910 TSPOAP1O95153 1857 aa17.24■□□□□ 0.35
ABCA3-205ENST00000567910 HECW1Q76N89 1606 aa17.23■□□□□ 0.35
ABCA3-205ENST00000567910 CASKIN1Q8WXD9 1431 aa17.19■□□□□ 0.34
ABCA3-205ENST00000567910 ABCA9Q8IUA7 1624 aa17.16■□□□□ 0.34
ABCA3-205ENST00000567910 CFAP43Q8NDM7 1665 aa17.16■□□□□ 0.34
ABCA3-205ENST00000567910 KCNH8Q96L42 1107 aa17.15■□□□□ 0.34
ABCA3-205ENST00000567910 FYCO1Q9BQS8 1478 aa17.15■□□□□ 0.34
ABCA3-205ENST00000567910 MAGI3Q5TCQ9 1506 aa17.13■□□□□ 0.33
ABCA3-205ENST00000567910 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.12■□□□□ 0.33
ABCA3-205ENST00000567910 HNRNPUL2Q1KMD3 747 aaKnown RBP17.12■□□□□ 0.33
ABCA3-205ENST00000567910 ATP1B4Q9UN42 357 aaPredicted RBP17.11■□□□□ 0.33
ABCA3-205ENST00000567910 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.11■□□□□ 0.33
ABCA3-205ENST00000567910 TTC37Q6PGP7 1564 aa17.11■□□□□ 0.33
ABCA3-205ENST00000567910 CD109Q6YHK3 1445 aa17.1■□□□□ 0.33
ABCA3-205ENST00000567910 KIF14Q15058 1648 aa17.1■□□□□ 0.33
ABCA3-205ENST00000567910 COL17A1Q9UMD9 1497 aaPredicted RBP17.09■□□□□ 0.33
ABCA3-205ENST00000567910 CCDC18Q5T9S5 1454 aa17.08■□□□□ 0.32
ABCA3-205ENST00000567910 PLEKHD1A6NEE1 506 aa17.07■□□□□ 0.32
ABCA3-205ENST00000567910 KDM6BO15054 1643 aa17.07■□□□□ 0.32
ABCA3-205ENST00000567910 TROQ12816 1431 aaPredicted RBP17.05■□□□□ 0.32
ABCA3-205ENST00000567910 TEX14Q8IWB6 1497 aa17.05■□□□□ 0.32
ABCA3-205ENST00000567910 VPS8Q8N3P4 1428 aa17.04■□□□□ 0.32
ABCA3-205ENST00000567910 MYO5CQ9NQX4 1742 aa16.96■□□□□ 0.31
ABCA3-205ENST00000567910 CDK11AQ9UQ88 783 aaPredicted RBP16.96■□□□□ 0.31
ABCA3-205ENST00000567910 ARAP3Q8WWN8 1544 aa16.96■□□□□ 0.3
ABCA3-205ENST00000567910 PLCH2O75038 1416 aa16.96■□□□□ 0.3
ABCA3-205ENST00000567910 TIAM1Q13009 1591 aa16.95■□□□□ 0.3
ABCA3-205ENST00000567910 NEO1Q92859 1461 aa16.95■□□□□ 0.3
ABCA3-205ENST00000567910 FRMPD1Q5SYB0 1578 aa16.94■□□□□ 0.3
ABCA3-205ENST00000567910 CDC42BPBQ9Y5S2 1711 aa16.94■□□□□ 0.3
ABCA3-205ENST00000567910 FANCAO15360 1455 aa16.93■□□□□ 0.3
ABCA3-205ENST00000567910 CDC42BPAQ5VT25 1732 aa16.93■□□□□ 0.3
ABCA3-205ENST00000567910 PREX2Q70Z35 1606 aa16.92■□□□□ 0.3
ABCA3-205ENST00000567910 EHBP1L1Q8N3D4 1523 aa16.91■□□□□ 0.3
ABCA3-205ENST00000567910 CFAP74Q9C0B2 1584 aa16.9■□□□□ 0.3
ABCA3-205ENST00000567910 AKNAQ7Z591 1439 aa16.9■□□□□ 0.3
ABCA3-205ENST00000567910 RICTORQ6R327 1708 aa16.9■□□□□ 0.3
ABCA3-205ENST00000567910 MAP3K1Q13233 1512 aa16.88■□□□□ 0.29
ABCA3-205ENST00000567910 GPATCH8Q9UKJ3 1502 aaKnown RBP16.88■□□□□ 0.29
ABCA3-205ENST00000567910 MTUS2Q5JR59 1369 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms