RNA–Protein interactions for RNA: ENST00000567806.1

GTF3C1-207, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 4

Gene GTF3C1, Length 584 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-207ENST00000567806 RUSC2Q8N2Y8 1516 aa32.73■■■□□ 2.83
GTF3C1-207ENST00000567806 NPM1P06748 294 aaKnown RBP eCLIP32.73■■■□□ 2.83
GTF3C1-207ENST00000567806 KIAA0586Q9BVV6 1533 aa32.69■■■□□ 2.82
GTF3C1-207ENST00000567806 AEBP2Q6ZN18 517 aaPredicted RBP32.65■■■□□ 2.82
GTF3C1-207ENST00000567806 CUL7Q14999 1698 aa32.65■■■□□ 2.82
GTF3C1-207ENST00000567806 CARMIL1Q5VZK9 1371 aa32.62■■■□□ 2.81
GTF3C1-207ENST00000567806 FAM69CQ0P6D2 419 aa32.56■■■□□ 2.8
GTF3C1-207ENST00000567806 KIF13AQ9H1H9 1805 aa32.49■■■□□ 2.79
GTF3C1-207ENST00000567806 ABCC10Q5T3U5 1492 aa32.47■■■□□ 2.79
GTF3C1-207ENST00000567806 PTPRGP23470 1445 aa32.46■■■□□ 2.79
GTF3C1-207ENST00000567806 TTBK1Q5TCY1 1321 aaPredicted RBP32.46■■■□□ 2.79
GTF3C1-207ENST00000567806 ADCY10Q96PN6 1610 aa32.45■■■□□ 2.79
GTF3C1-207ENST00000567806 MAPKBP1O60336 1514 aa32.44■■■□□ 2.78
GTF3C1-207ENST00000567806 CARMIL2Q6F5E8 1435 aa32.43■■■□□ 2.78
GTF3C1-207ENST00000567806 TNIKQ9UKE5 1360 aa32.37■■■□□ 2.77
GTF3C1-207ENST00000567806 IQGAP2Q13576 1575 aa32.32■■■□□ 2.76
GTF3C1-207ENST00000567806 DIP2BQ9P265 1576 aa32.31■■■□□ 2.76
GTF3C1-207ENST00000567806 RAPGEF2Q9Y4G8 1499 aa32.28■■■□□ 2.76
GTF3C1-207ENST00000567806 ABCC2Q92887 1545 aa32.21■■■□□ 2.75
GTF3C1-207ENST00000567806 UACAQ9BZF9 1416 aa32.17■■■□□ 2.74
GTF3C1-207ENST00000567806 DISP1Q96F81 1524 aa32.17■■■□□ 2.74
GTF3C1-207ENST00000567806 UHRF1BP1LA0JNW5 1464 aa32.14■■■□□ 2.74
GTF3C1-207ENST00000567806 PLB1Q6P1J6 1458 aa32.12■■■□□ 2.73
GTF3C1-207ENST00000567806 ASXL2Q76L83 1435 aa32.12■■■□□ 2.73
GTF3C1-207ENST00000567806 UGGT2Q9NYU1 1516 aa32.11■■■□□ 2.73
GTF3C1-207ENST00000567806 TSPOAP1O95153 1857 aa32.1■■■□□ 2.73
GTF3C1-207ENST00000567806 KDM6BO15054 1643 aa32.08■■■□□ 2.73
GTF3C1-207ENST00000567806 KIAA0556O60303 1618 aa32■■■□□ 2.71
GTF3C1-207ENST00000567806 KDM5BQ9UGL1 1544 aa31.99■■■□□ 2.71
GTF3C1-207ENST00000567806 GLI2P10070 1586 aa31.98■■■□□ 2.71
GTF3C1-207ENST00000567806 GOLGA3Q08378 1498 aa31.92■■■□□ 2.7
GTF3C1-207ENST00000567806 EPRSP07814 1512 aaKnown RBP31.9■■■□□ 2.7
GTF3C1-207ENST00000567806 PRXQ9BXM0 1461 aa31.9■■■□□ 2.7
GTF3C1-207ENST00000567806 CTTNBP2Q8WZ74 1663 aa31.88■■■□□ 2.69
GTF3C1-207ENST00000567806 ZCCHC11Q5TAX3 1644 aaKnown RBP31.87■■■□□ 2.69
GTF3C1-207ENST00000567806 KDM4FA0A1W2PPD8 638 aa31.87■■■□□ 2.69
GTF3C1-207ENST00000567806 FAM9AQ8IZU1 332 aaPredicted RBP31.86■■■□□ 2.69
GTF3C1-207ENST00000567806 PPRC1Q5VV67 1664 aaKnown RBP31.82■■■□□ 2.68
GTF3C1-207ENST00000567806 TEX14Q8IWB6 1497 aa31.78■■■□□ 2.68
GTF3C1-207ENST00000567806 WDR7Q9Y4E6 1490 aa31.78■■■□□ 2.68
GTF3C1-207ENST00000567806 CSRNP3Q8WYN3 585 aa31.78■■■□□ 2.68
GTF3C1-207ENST00000567806 KCNH8Q96L42 1107 aa31.77■■■□□ 2.68
GTF3C1-207ENST00000567806 MAP3K4Q9Y6R4 1608 aa31.76■■■□□ 2.67
GTF3C1-207ENST00000567806 P3H3Q8IVL6 736 aa31.74■■■□□ 2.67
GTF3C1-207ENST00000567806 ABCA8O94911 1581 aa31.73■■■□□ 2.67
GTF3C1-207ENST00000567806 COL17A1Q9UMD9 1497 aaPredicted RBP31.72■■■□□ 2.67
GTF3C1-207ENST00000567806 CD109Q6YHK3 1445 aa31.66■■■□□ 2.66
GTF3C1-207ENST00000567806 ARID3CA6NKF2 412 aa31.63■■■□□ 2.65
GTF3C1-207ENST00000567806 MAGI3Q5TCQ9 1506 aa31.57■■■□□ 2.64
GTF3C1-207ENST00000567806 EEA1Q15075 1411 aa31.56■■■□□ 2.64
GTF3C1-207ENST00000567806 ADGRL1O94910 1474 aa31.54■■■□□ 2.64
GTF3C1-207ENST00000567806 CFAP43Q8NDM7 1665 aa31.54■■■□□ 2.64
GTF3C1-207ENST00000567806 ATP10BO94823 1461 aa31.53■■■□□ 2.64
GTF3C1-207ENST00000567806 RANGAP1P46060 587 aaPredicted RBP31.52■■■□□ 2.64
GTF3C1-207ENST00000567806 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.49■■■□□ 2.63
GTF3C1-207ENST00000567806 HNRNPUL2Q1KMD3 747 aaKnown RBP31.49■■■□□ 2.63
GTF3C1-207ENST00000567806 SAMD9Q5K651 1589 aa31.45■■■□□ 2.63
GTF3C1-207ENST00000567806 RAPGEF6Q8TEU7 1601 aa31.38■■■□□ 2.61
GTF3C1-207ENST00000567806 PHLDB1Q86UU1 1377 aa31.34■■■□□ 2.61
GTF3C1-207ENST00000567806 FHOD3Q2V2M9 1422 aa31.33■■■□□ 2.61
GTF3C1-207ENST00000567806 ARAP3Q8WWN8 1544 aa31.33■■■□□ 2.61
GTF3C1-207ENST00000567806 PLEKHD1A6NEE1 506 aa31.3■■■□□ 2.6
GTF3C1-207ENST00000567806 ABCA9Q8IUA7 1624 aa31.29■■■□□ 2.6
GTF3C1-207ENST00000567806 NUP153P49790 1475 aaKnown RBP31.28■■■□□ 2.6
GTF3C1-207ENST00000567806 RAPGEF3O95398 923 aa31.24■■■□□ 2.59
GTF3C1-207ENST00000567806 KIF21BO75037 1637 aa31.21■■■□□ 2.59
GTF3C1-207ENST00000567806 UBTFP17480 764 aaKnown RBP31.21■■■□□ 2.59
GTF3C1-207ENST00000567806 NEO1Q92859 1461 aa31.21■■■□□ 2.59
GTF3C1-207ENST00000567806 EHMT2Q96KQ7 1210 aa31.2■■■□□ 2.59
GTF3C1-207ENST00000567806 EFCAB5A4FU69 1503 aa31.19■■■□□ 2.58
GTF3C1-207ENST00000567806 CHIC1Q5VXU3 224 aa31.13■■■□□ 2.57
GTF3C1-207ENST00000567806 ATP1B4Q9UN42 357 aaPredicted RBP31.09■■■□□ 2.57
GTF3C1-207ENST00000567806 HECW2Q9P2P5 1572 aa31.08■■■□□ 2.57
GTF3C1-207ENST00000567806 ARID4BQ4LE39 1312 aaPredicted RBP31.06■■■□□ 2.56
GTF3C1-207ENST00000567806 AKNAQ7Z591 1439 aa31.03■■■□□ 2.56
GTF3C1-207ENST00000567806 DENND4BO75064 1496 aaPredicted RBP31.02■■■□□ 2.56
GTF3C1-207ENST00000567806 FANCAO15360 1455 aa31.01■■■□□ 2.55
GTF3C1-207ENST00000567806 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP31■■■□□ 2.55
GTF3C1-207ENST00000567806 FMN1Q68DA7 1419 aa30.98■■■□□ 2.55
GTF3C1-207ENST00000567806 CDK13Q14004 1512 aaKnown RBP30.98■■■□□ 2.55
GTF3C1-207ENST00000567806 CDK11AQ9UQ88 783 aaPredicted RBP30.97■■■□□ 2.55
GTF3C1-207ENST00000567806 FRMPD1Q5SYB0 1578 aa30.96■■■□□ 2.55
GTF3C1-207ENST00000567806 ILDR1Q86SU0 546 aaPredicted RBP30.96■■■□□ 2.55
GTF3C1-207ENST00000567806 CFAP74Q9C0B2 1584 aa30.93■■■□□ 2.54
GTF3C1-207ENST00000567806 PTPRMP28827 1452 aa30.92■■■□□ 2.54
GTF3C1-207ENST00000567806 ARHGAP35Q9NRY4 1499 aa30.91■■■□□ 2.54
GTF3C1-207ENST00000567806 TTC37Q6PGP7 1564 aa30.91■■■□□ 2.54
GTF3C1-207ENST00000567806 ADAMTSL3P82987 1691 aa30.9■■■□□ 2.54
GTF3C1-207ENST00000567806 PLCH2O75038 1416 aa30.88■■■□□ 2.53
GTF3C1-207ENST00000567806 HECW1Q76N89 1606 aa30.86■■■□□ 2.53
GTF3C1-207ENST00000567806 RICTORQ6R327 1708 aa30.85■■■□□ 2.53
GTF3C1-207ENST00000567806 EFCAB2Q5VUJ9 269 aa30.85■■■□□ 2.53
GTF3C1-207ENST00000567806 BCORL1Q5H9F3 1711 aa30.84■■■□□ 2.53
GTF3C1-207ENST00000567806 ARHGEF40Q8TER5 1519 aa30.83■■■□□ 2.53
GTF3C1-207ENST00000567806 SCAPERQ9BY12 1400 aa30.83■■■□□ 2.53
GTF3C1-207ENST00000567806 POGZQ7Z3K3 1410 aa30.8■■■□□ 2.52
GTF3C1-207ENST00000567806 MAGI2Q86UL8 1455 aa30.79■■■□□ 2.52
GTF3C1-207ENST00000567806 ZMYM4Q5VZL5 1548 aa30.78■■■□□ 2.52
GTF3C1-207ENST00000567806 MADDQ8WXG6 1647 aa30.77■■■□□ 2.52
GTF3C1-207ENST00000567806 ZFYVE16Q7Z3T8 1539 aa30.77■■■□□ 2.52
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms