RNA–Protein interactions for RNA: ENST00000567710.5

NSMCE1-213, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 472 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-213ENST00000567710 EEA1Q15075 1411 aa18.02■□□□□ 0.48
NSMCE1-213ENST00000567710 KIAA0586Q9BVV6 1533 aa18.02■□□□□ 0.47
NSMCE1-213ENST00000567710 PRXQ9BXM0 1461 aa18.01■□□□□ 0.47
NSMCE1-213ENST00000567710 CYB5RLQ6IPT4 315 aa17.99■□□□□ 0.47
NSMCE1-213ENST00000567710 CSRNP3Q8WYN3 585 aa17.99■□□□□ 0.47
NSMCE1-213ENST00000567710 JPH4Q96JJ6 628 aa17.99■□□□□ 0.47
NSMCE1-213ENST00000567710 ERCC6L2Q5T890 1561 aa17.99■□□□□ 0.47
NSMCE1-213ENST00000567710 PRG4Q92954 1404 aaPredicted RBP17.97■□□□□ 0.47
NSMCE1-213ENST00000567710 FAM9AQ8IZU1 332 aaPredicted RBP17.95■□□□□ 0.46
NSMCE1-213ENST00000567710 IQGAP2Q13576 1575 aa17.92■□□□□ 0.46
NSMCE1-213ENST00000567710 CTTNBP2Q8WZ74 1663 aa17.85■□□□□ 0.45
NSMCE1-213ENST00000567710 UGGT2Q9NYU1 1516 aa17.83■□□□□ 0.45
NSMCE1-213ENST00000567710 KIF21BO75037 1637 aa17.83■□□□□ 0.44
NSMCE1-213ENST00000567710 CARMIL2Q6F5E8 1435 aa17.81■□□□□ 0.44
NSMCE1-213ENST00000567710 DISP1Q96F81 1524 aa17.81■□□□□ 0.44
NSMCE1-213ENST00000567710 TNIKQ9UKE5 1360 aa17.77■□□□□ 0.43
NSMCE1-213ENST00000567710 KIAA0556O60303 1618 aa17.76■□□□□ 0.43
NSMCE1-213ENST00000567710 PTPRGP23470 1445 aa17.75■□□□□ 0.43
NSMCE1-213ENST00000567710 GOLGA3Q08378 1498 aa17.74■□□□□ 0.43
NSMCE1-213ENST00000567710 TTBK1Q5TCY1 1321 aaPredicted RBP17.72■□□□□ 0.43
NSMCE1-213ENST00000567710 EHMT2Q96KQ7 1210 aa17.72■□□□□ 0.43
NSMCE1-213ENST00000567710 ADCY10Q96PN6 1610 aa17.68■□□□□ 0.42
NSMCE1-213ENST00000567710 UBTFP17480 764 aaKnown RBP17.67■□□□□ 0.42
NSMCE1-213ENST00000567710 SAMD9Q5K651 1589 aa17.65■□□□□ 0.42
NSMCE1-213ENST00000567710 RANGAP1P46060 587 aaPredicted RBP17.64■□□□□ 0.41
NSMCE1-213ENST00000567710 UACAQ9BZF9 1416 aa17.64■□□□□ 0.41
NSMCE1-213ENST00000567710 P3H3Q8IVL6 736 aa17.63■□□□□ 0.41
NSMCE1-213ENST00000567710 UHRF1BP1LA0JNW5 1464 aa17.62■□□□□ 0.41
NSMCE1-213ENST00000567710 ABCC2Q92887 1545 aa17.61■□□□□ 0.41
NSMCE1-213ENST00000567710 NPM1P06748 294 aaKnown RBP eCLIP17.6■□□□□ 0.41
NSMCE1-213ENST00000567710 TRHP20396 242 aaPredicted RBP17.6■□□□□ 0.41
NSMCE1-213ENST00000567710 PLB1Q6P1J6 1458 aa17.59■□□□□ 0.41
NSMCE1-213ENST00000567710 EFCAB5A4FU69 1503 aa17.58■□□□□ 0.41
NSMCE1-213ENST00000567710 FHOD3Q2V2M9 1422 aa17.57■□□□□ 0.4
NSMCE1-213ENST00000567710 ABCA8O94911 1581 aa17.56■□□□□ 0.4
NSMCE1-213ENST00000567710 MAPKBP1O60336 1514 aa17.56■□□□□ 0.4
NSMCE1-213ENST00000567710 KDM5BQ9UGL1 1544 aa17.54■□□□□ 0.4
NSMCE1-213ENST00000567710 ARHGAP35Q9NRY4 1499 aa17.51■□□□□ 0.39
NSMCE1-213ENST00000567710 ZCCHC11Q5TAX3 1644 aaKnown RBP17.49■□□□□ 0.39
NSMCE1-213ENST00000567710 ABCC10Q5T3U5 1492 aa17.48■□□□□ 0.39
NSMCE1-213ENST00000567710 ASXL2Q76L83 1435 aa17.47■□□□□ 0.39
NSMCE1-213ENST00000567710 RAPGEF6Q8TEU7 1601 aa17.47■□□□□ 0.39
NSMCE1-213ENST00000567710 DIP2BQ9P265 1576 aa17.45■□□□□ 0.38
NSMCE1-213ENST00000567710 KIF13AQ9H1H9 1805 aa17.43■□□□□ 0.38
NSMCE1-213ENST00000567710 ARID3CA6NKF2 412 aa17.43■□□□□ 0.38
NSMCE1-213ENST00000567710 FAM69CQ0P6D2 419 aa17.43■□□□□ 0.38
NSMCE1-213ENST00000567710 CLIP1P30622 1438 aa17.42■□□□□ 0.38
NSMCE1-213ENST00000567710 FMN1Q68DA7 1419 aa17.42■□□□□ 0.38
NSMCE1-213ENST00000567710 ATP10BO94823 1461 aa17.42■□□□□ 0.38
NSMCE1-213ENST00000567710 NUP153P49790 1475 aaKnown RBP17.42■□□□□ 0.38
NSMCE1-213ENST00000567710 WDR7Q9Y4E6 1490 aa17.4■□□□□ 0.38
NSMCE1-213ENST00000567710 LOC105371045A0A1W2PR82 267 aa17.4■□□□□ 0.38
NSMCE1-213ENST00000567710 EPRSP07814 1512 aaKnown RBP17.37■□□□□ 0.37
NSMCE1-213ENST00000567710 CEP162Q5TB80 1403 aa17.36■□□□□ 0.37
NSMCE1-213ENST00000567710 GLI2P10070 1586 aa17.36■□□□□ 0.37
NSMCE1-213ENST00000567710 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.34■□□□□ 0.37
NSMCE1-213ENST00000567710 HNRNPUL2Q1KMD3 747 aaKnown RBP17.34■□□□□ 0.37
NSMCE1-213ENST00000567710 HECW1Q76N89 1606 aa17.32■□□□□ 0.36
NSMCE1-213ENST00000567710 ATP1B4Q9UN42 357 aaPredicted RBP17.31■□□□□ 0.36
NSMCE1-213ENST00000567710 CDK13Q14004 1512 aaKnown RBP17.31■□□□□ 0.36
NSMCE1-213ENST00000567710 KCNH8Q96L42 1107 aa17.3■□□□□ 0.36
NSMCE1-213ENST00000567710 CASKIN1Q8WXD9 1431 aa17.3■□□□□ 0.36
NSMCE1-213ENST00000567710 PCF11O94913 1555 aaKnown RBP17.29■□□□□ 0.36
NSMCE1-213ENST00000567710 MAP3K4Q9Y6R4 1608 aa17.27■□□□□ 0.36
NSMCE1-213ENST00000567710 PLEKHD1A6NEE1 506 aa17.26■□□□□ 0.35
NSMCE1-213ENST00000567710 TSPOAP1O95153 1857 aa17.26■□□□□ 0.35
NSMCE1-213ENST00000567710 FYCO1Q9BQS8 1478 aa17.25■□□□□ 0.35
NSMCE1-213ENST00000567710 PPRC1Q5VV67 1664 aaKnown RBP17.24■□□□□ 0.35
NSMCE1-213ENST00000567710 CFAP43Q8NDM7 1665 aa17.23■□□□□ 0.35
NSMCE1-213ENST00000567710 CD109Q6YHK3 1445 aa17.22■□□□□ 0.35
NSMCE1-213ENST00000567710 LRRIQ1Q96JM4 1722 aa17.22■□□□□ 0.35
NSMCE1-213ENST00000567710 CCDC18Q5T9S5 1454 aa17.22■□□□□ 0.35
NSMCE1-213ENST00000567710 CDK11AQ9UQ88 783 aaPredicted RBP17.2■□□□□ 0.34
NSMCE1-213ENST00000567710 ABCA9Q8IUA7 1624 aa17.2■□□□□ 0.34
NSMCE1-213ENST00000567710 TEX14Q8IWB6 1497 aa17.19■□□□□ 0.34
NSMCE1-213ENST00000567710 MAGI3Q5TCQ9 1506 aa17.19■□□□□ 0.34
NSMCE1-213ENST00000567710 TROQ12816 1431 aaPredicted RBP17.16■□□□□ 0.34
NSMCE1-213ENST00000567710 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.16■□□□□ 0.34
NSMCE1-213ENST00000567710 KDM6BO15054 1643 aa17.14■□□□□ 0.33
NSMCE1-213ENST00000567710 VPS8Q8N3P4 1428 aa17.14■□□□□ 0.33
NSMCE1-213ENST00000567710 TTC37Q6PGP7 1564 aa17.13■□□□□ 0.33
NSMCE1-213ENST00000567710 KIF14Q15058 1648 aa17.11■□□□□ 0.33
NSMCE1-213ENST00000567710 COL17A1Q9UMD9 1497 aaPredicted RBP17.1■□□□□ 0.33
NSMCE1-213ENST00000567710 NEO1Q92859 1461 aa17.06■□□□□ 0.32
NSMCE1-213ENST00000567710 PLCH2O75038 1416 aa17.05■□□□□ 0.32
NSMCE1-213ENST00000567710 PHLDB1Q86UU1 1377 aa17.05■□□□□ 0.32
NSMCE1-213ENST00000567710 MTUS2Q5JR59 1369 aa17.04■□□□□ 0.32
NSMCE1-213ENST00000567710 ARAP3Q8WWN8 1544 aa17.04■□□□□ 0.32
NSMCE1-213ENST00000567710 FANCAO15360 1455 aa17.04■□□□□ 0.32
NSMCE1-213ENST00000567710 TIAM1Q13009 1591 aa17.02■□□□□ 0.31
NSMCE1-213ENST00000567710 MYO5CQ9NQX4 1742 aa17.01■□□□□ 0.31
NSMCE1-213ENST00000567710 EHBP1L1Q8N3D4 1523 aa17.01■□□□□ 0.31
NSMCE1-213ENST00000567710 AKNAQ7Z591 1439 aa17.01■□□□□ 0.31
NSMCE1-213ENST00000567710 CFAP74Q9C0B2 1584 aa17.01■□□□□ 0.31
NSMCE1-213ENST00000567710 ARHGAP5Q13017 1502 aa16.98■□□□□ 0.31
NSMCE1-213ENST00000567710 EFCAB2Q5VUJ9 269 aa16.98■□□□□ 0.31
NSMCE1-213ENST00000567710 MAP3K1Q13233 1512 aa16.97■□□□□ 0.31
NSMCE1-213ENST00000567710 PREX2Q70Z35 1606 aa16.96■□□□□ 0.31
NSMCE1-213ENST00000567710 RAPGEF3O95398 923 aa16.96■□□□□ 0.31
NSMCE1-213ENST00000567710 DENND4BO75064 1496 aaPredicted RBP16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms