RNA–Protein interactions for RNA: ENST00000567657.5

NEIL1-215, Transcript of nei like DNA glycosylase 1, humanhuman

TSL 3

Gene NEIL1, Length 780 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL1-215ENST00000567657 SHROOM2Q13796 1616 aa32.05■■■□□ 2.72
NEIL1-215ENST00000567657 CHIC1Q5VXU3 224 aa32.05■■■□□ 2.72
NEIL1-215ENST00000567657 PRG4Q92954 1404 aaPredicted RBP32.04■■■□□ 2.72
NEIL1-215ENST00000567657 KIAA0586Q9BVV6 1533 aa31.99■■■□□ 2.71
NEIL1-215ENST00000567657 RAPGEF2Q9Y4G8 1499 aa31.97■■■□□ 2.71
NEIL1-215ENST00000567657 FAM9AQ8IZU1 332 aaPredicted RBP31.97■■■□□ 2.71
NEIL1-215ENST00000567657 CSRNP3Q8WYN3 585 aa31.86■■■□□ 2.69
NEIL1-215ENST00000567657 PRXQ9BXM0 1461 aa31.85■■■□□ 2.69
NEIL1-215ENST00000567657 TTBK1Q5TCY1 1321 aaPredicted RBP31.84■■■□□ 2.69
NEIL1-215ENST00000567657 IQGAP2Q13576 1575 aa31.78■■■□□ 2.68
NEIL1-215ENST00000567657 TRHP20396 242 aaPredicted RBP31.74■■■□□ 2.67
NEIL1-215ENST00000567657 EHMT2Q96KQ7 1210 aa31.71■■■□□ 2.67
NEIL1-215ENST00000567657 DISP1Q96F81 1524 aa31.66■■■□□ 2.66
NEIL1-215ENST00000567657 EEA1Q15075 1411 aa31.66■■■□□ 2.66
NEIL1-215ENST00000567657 PTPRGP23470 1445 aa31.61■■■□□ 2.65
NEIL1-215ENST00000567657 CARMIL2Q6F5E8 1435 aa31.61■■■□□ 2.65
NEIL1-215ENST00000567657 UGGT2Q9NYU1 1516 aa31.6■■■□□ 2.65
NEIL1-215ENST00000567657 CTTNBP2Q8WZ74 1663 aa31.59■■■□□ 2.65
NEIL1-215ENST00000567657 TNIKQ9UKE5 1360 aa31.58■■■□□ 2.65
NEIL1-215ENST00000567657 RANGAP1P46060 587 aaPredicted RBP31.55■■■□□ 2.64
NEIL1-215ENST00000567657 ADCY10Q96PN6 1610 aa31.53■■■□□ 2.64
NEIL1-215ENST00000567657 KIAA0556O60303 1618 aa31.51■■■□□ 2.63
NEIL1-215ENST00000567657 P3H3Q8IVL6 736 aa31.51■■■□□ 2.63
NEIL1-215ENST00000567657 NPM1P06748 294 aaKnown RBP eCLIP31.42■■■□□ 2.62
NEIL1-215ENST00000567657 KIF21BO75037 1637 aa31.41■■■□□ 2.62
NEIL1-215ENST00000567657 UACAQ9BZF9 1416 aa31.37■■■□□ 2.61
NEIL1-215ENST00000567657 GOLGA3Q08378 1498 aa31.35■■■□□ 2.61
NEIL1-215ENST00000567657 UBTFP17480 764 aaKnown RBP31.34■■■□□ 2.61
NEIL1-215ENST00000567657 PLB1Q6P1J6 1458 aa31.33■■■□□ 2.61
NEIL1-215ENST00000567657 ABCC2Q92887 1545 aa31.29■■■□□ 2.6
NEIL1-215ENST00000567657 UHRF1BP1LA0JNW5 1464 aa31.27■■■□□ 2.6
NEIL1-215ENST00000567657 FAM69CQ0P6D2 419 aa31.26■■■□□ 2.59
NEIL1-215ENST00000567657 ARID3CA6NKF2 412 aa31.25■■■□□ 2.59
NEIL1-215ENST00000567657 MAPKBP1O60336 1514 aa31.24■■■□□ 2.59
NEIL1-215ENST00000567657 SAMD9Q5K651 1589 aa31.23■■■□□ 2.59
NEIL1-215ENST00000567657 FHOD3Q2V2M9 1422 aa31.22■■■□□ 2.59
NEIL1-215ENST00000567657 KIF13AQ9H1H9 1805 aa31.19■■■□□ 2.58
NEIL1-215ENST00000567657 ABCC10Q5T3U5 1492 aa31.19■■■□□ 2.58
NEIL1-215ENST00000567657 ABCA8O94911 1581 aa31.18■■■□□ 2.58
NEIL1-215ENST00000567657 ASXL2Q76L83 1435 aa31.17■■■□□ 2.58
NEIL1-215ENST00000567657 KDM5BQ9UGL1 1544 aa31.16■■■□□ 2.58
NEIL1-215ENST00000567657 DIP2BQ9P265 1576 aa31.13■■■□□ 2.57
NEIL1-215ENST00000567657 ZCCHC11Q5TAX3 1644 aaKnown RBP31.13■■■□□ 2.57
NEIL1-215ENST00000567657 ARHGAP35Q9NRY4 1499 aa31.01■■■□□ 2.56
NEIL1-215ENST00000567657 ATP10BO94823 1461 aa31■■■□□ 2.55
NEIL1-215ENST00000567657 EFCAB5A4FU69 1503 aa30.99■■■□□ 2.55
NEIL1-215ENST00000567657 KCNH8Q96L42 1107 aa30.99■■■□□ 2.55
NEIL1-215ENST00000567657 RAPGEF6Q8TEU7 1601 aa30.97■■■□□ 2.55
NEIL1-215ENST00000567657 EPRSP07814 1512 aaKnown RBP30.97■■■□□ 2.55
NEIL1-215ENST00000567657 TSPOAP1O95153 1857 aa30.96■■■□□ 2.55
NEIL1-215ENST00000567657 NUP153P49790 1475 aaKnown RBP30.94■■■□□ 2.54
NEIL1-215ENST00000567657 WDR7Q9Y4E6 1490 aa30.94■■■□□ 2.54
NEIL1-215ENST00000567657 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.93■■■□□ 2.54
NEIL1-215ENST00000567657 HNRNPUL2Q1KMD3 747 aaKnown RBP30.93■■■□□ 2.54
NEIL1-215ENST00000567657 LOC105371045A0A1W2PR82 267 aa30.89■■■□□ 2.54
NEIL1-215ENST00000567657 ATP1B4Q9UN42 357 aaPredicted RBP30.88■■■□□ 2.53
NEIL1-215ENST00000567657 GLI2P10070 1586 aa30.87■■■□□ 2.53
NEIL1-215ENST00000567657 PPRC1Q5VV67 1664 aaKnown RBP30.81■■■□□ 2.52
NEIL1-215ENST00000567657 CDK13Q14004 1512 aaKnown RBP30.78■■■□□ 2.52
NEIL1-215ENST00000567657 CLIP1P30622 1438 aa30.76■■■□□ 2.51
NEIL1-215ENST00000567657 MAP3K4Q9Y6R4 1608 aa30.76■■■□□ 2.51
NEIL1-215ENST00000567657 FMN1Q68DA7 1419 aa30.74■■■□□ 2.51
NEIL1-215ENST00000567657 CD109Q6YHK3 1445 aa30.71■■■□□ 2.51
NEIL1-215ENST00000567657 PLEKHD1A6NEE1 506 aa30.67■■■□□ 2.5
NEIL1-215ENST00000567657 COL17A1Q9UMD9 1497 aaPredicted RBP30.66■■■□□ 2.5
NEIL1-215ENST00000567657 KDM6BO15054 1643 aa30.65■■■□□ 2.5
NEIL1-215ENST00000567657 CEP162Q5TB80 1403 aa30.62■■■□□ 2.49
NEIL1-215ENST00000567657 PCF11O94913 1555 aaKnown RBP30.62■■■□□ 2.49
NEIL1-215ENST00000567657 HECW1Q76N89 1606 aa30.62■■■□□ 2.49
NEIL1-215ENST00000567657 CFAP43Q8NDM7 1665 aa30.59■■■□□ 2.49
NEIL1-215ENST00000567657 LRRIQ1Q96JM4 1722 aa30.59■■■□□ 2.49
NEIL1-215ENST00000567657 TEX14Q8IWB6 1497 aa30.57■■■□□ 2.48
NEIL1-215ENST00000567657 MAGI3Q5TCQ9 1506 aa30.56■■■□□ 2.48
NEIL1-215ENST00000567657 CASKIN1Q8WXD9 1431 aa30.56■■■□□ 2.48
NEIL1-215ENST00000567657 ABCA9Q8IUA7 1624 aa30.55■■■□□ 2.48
NEIL1-215ENST00000567657 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP30.5■■■□□ 2.47
NEIL1-215ENST00000567657 TTC37Q6PGP7 1564 aa30.47■■■□□ 2.47
NEIL1-215ENST00000567657 FYCO1Q9BQS8 1478 aa30.43■■■□□ 2.46
NEIL1-215ENST00000567657 CDK11AQ9UQ88 783 aaPredicted RBP30.42■■■□□ 2.46
NEIL1-215ENST00000567657 KIF14Q15058 1648 aa30.42■■■□□ 2.46
NEIL1-215ENST00000567657 TROQ12816 1431 aaPredicted RBP30.4■■■□□ 2.46
NEIL1-215ENST00000567657 RAPGEF3O95398 923 aa30.38■■■□□ 2.45
NEIL1-215ENST00000567657 CCDC18Q5T9S5 1454 aa30.36■■■□□ 2.45
NEIL1-215ENST00000567657 ARAP3Q8WWN8 1544 aa30.3■■■□□ 2.44
NEIL1-215ENST00000567657 FANCAO15360 1455 aa30.3■■■□□ 2.44
NEIL1-215ENST00000567657 NEO1Q92859 1461 aa30.3■■■□□ 2.44
NEIL1-215ENST00000567657 AKNAQ7Z591 1439 aa30.29■■■□□ 2.44
NEIL1-215ENST00000567657 PLCH2O75038 1416 aa30.28■■■□□ 2.44
NEIL1-215ENST00000567657 PHLDB1Q86UU1 1377 aa30.22■■■□□ 2.43
NEIL1-215ENST00000567657 KDM4FA0A1W2PPD8 638 aa30.21■■■□□ 2.43
NEIL1-215ENST00000567657 VPS8Q8N3P4 1428 aa30.2■■■□□ 2.42
NEIL1-215ENST00000567657 FRMPD1Q5SYB0 1578 aa30.2■■■□□ 2.42
NEIL1-215ENST00000567657 EFCAB2Q5VUJ9 269 aa30.18■■■□□ 2.42
NEIL1-215ENST00000567657 MYO5CQ9NQX4 1742 aa30.17■■■□□ 2.42
NEIL1-215ENST00000567657 MTUS2Q5JR59 1369 aa30.16■■■□□ 2.42
NEIL1-215ENST00000567657 DENND4BO75064 1496 aaPredicted RBP30.16■■■□□ 2.42
NEIL1-215ENST00000567657 ARHGAP5Q13017 1502 aa30.16■■■□□ 2.42
NEIL1-215ENST00000567657 SCAPERQ9BY12 1400 aa30.15■■■□□ 2.42
NEIL1-215ENST00000567657 AEBP2Q6ZN18 517 aaPredicted RBP30.15■■■□□ 2.42
NEIL1-215ENST00000567657 ADGRL1O94910 1474 aa30.14■■■□□ 2.42
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms