RNA–Protein interactions for RNA: ENST00000567535.5

SCAMP5-213, Transcript of secretory carrier membrane protein 5, humanhuman

TSL 3

Gene SCAMP5, Length 593 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP5-213ENST00000567535 CUL7Q14999 1698 aa34.62■■■■□ 3.13
SCAMP5-213ENST00000567535 IGF1RP08069 1367 aa34.61■■■■□ 3.13
SCAMP5-213ENST00000567535 KIAA0586Q9BVV6 1533 aa34.52■■■■□ 3.12
SCAMP5-213ENST00000567535 KIF13AQ9H1H9 1805 aa34.42■■■■□ 3.1
SCAMP5-213ENST00000567535 CARMIL1Q5VZK9 1371 aa34.36■■■■□ 3.09
SCAMP5-213ENST00000567535 ADCY10Q96PN6 1610 aa34.36■■■■□ 3.09
SCAMP5-213ENST00000567535 MAPKBP1O60336 1514 aa34.33■■■■□ 3.09
SCAMP5-213ENST00000567535 NPM1P06748 294 aaKnown RBP eCLIP34.27■■■■□ 3.08
SCAMP5-213ENST00000567535 ABCC10Q5T3U5 1492 aa34.27■■■■□ 3.08
SCAMP5-213ENST00000567535 IQGAP2Q13576 1575 aa34.22■■■■□ 3.07
SCAMP5-213ENST00000567535 DIP2BQ9P265 1576 aa34.21■■■■□ 3.07
SCAMP5-213ENST00000567535 PTPRGP23470 1445 aa34.16■■■■□ 3.06
SCAMP5-213ENST00000567535 CARMIL2Q6F5E8 1435 aa34.16■■■■□ 3.06
SCAMP5-213ENST00000567535 FAM69CQ0P6D2 419 aa34.16■■■■□ 3.06
SCAMP5-213ENST00000567535 TNIKQ9UKE5 1360 aa34.11■■■■□ 3.05
SCAMP5-213ENST00000567535 RAPGEF2Q9Y4G8 1499 aa34.09■■■■□ 3.05
SCAMP5-213ENST00000567535 AEBP2Q6ZN18 517 aaPredicted RBP34.08■■■■□ 3.05
SCAMP5-213ENST00000567535 DISP1Q96F81 1524 aa34.04■■■■□ 3.04
SCAMP5-213ENST00000567535 ABCC2Q92887 1545 aa34.03■■■■□ 3.04
SCAMP5-213ENST00000567535 TTBK1Q5TCY1 1321 aaPredicted RBP34.01■■■■□ 3.03
SCAMP5-213ENST00000567535 UGGT2Q9NYU1 1516 aa33.99■■■■□ 3.03
SCAMP5-213ENST00000567535 UHRF1BP1LA0JNW5 1464 aa33.97■■■■□ 3.03
SCAMP5-213ENST00000567535 UACAQ9BZF9 1416 aa33.92■■■■□ 3.02
SCAMP5-213ENST00000567535 KIAA0556O60303 1618 aa33.91■■■■□ 3.02
SCAMP5-213ENST00000567535 TSPOAP1O95153 1857 aa33.9■■■■□ 3.02
SCAMP5-213ENST00000567535 KDM6BO15054 1643 aa33.89■■■■□ 3.02
SCAMP5-213ENST00000567535 ASXL2Q76L83 1435 aa33.88■■■■□ 3.01
SCAMP5-213ENST00000567535 PLB1Q6P1J6 1458 aa33.88■■■■□ 3.01
SCAMP5-213ENST00000567535 CTTNBP2Q8WZ74 1663 aa33.87■■■■□ 3.01
SCAMP5-213ENST00000567535 GLI2P10070 1586 aa33.82■■■■□ 3
SCAMP5-213ENST00000567535 KDM5BQ9UGL1 1544 aa33.82■■■■□ 3
SCAMP5-213ENST00000567535 PRXQ9BXM0 1461 aa33.76■■■■□ 3
SCAMP5-213ENST00000567535 ZCCHC11Q5TAX3 1644 aaKnown RBP33.75■■■□□ 2.99
SCAMP5-213ENST00000567535 PPRC1Q5VV67 1664 aaKnown RBP33.74■■■□□ 2.99
SCAMP5-213ENST00000567535 GOLGA3Q08378 1498 aa33.71■■■□□ 2.99
SCAMP5-213ENST00000567535 EPRSP07814 1512 aaKnown RBP33.69■■■□□ 2.98
SCAMP5-213ENST00000567535 MAP3K4Q9Y6R4 1608 aa33.65■■■□□ 2.98
SCAMP5-213ENST00000567535 ABCA8O94911 1581 aa33.59■■■□□ 2.97
SCAMP5-213ENST00000567535 WDR7Q9Y4E6 1490 aa33.58■■■□□ 2.97
SCAMP5-213ENST00000567535 TEX14Q8IWB6 1497 aa33.53■■■□□ 2.96
SCAMP5-213ENST00000567535 KDM4FA0A1W2PPD8 638 aa33.47■■■□□ 2.95
SCAMP5-213ENST00000567535 COL17A1Q9UMD9 1497 aaPredicted RBP33.46■■■□□ 2.95
SCAMP5-213ENST00000567535 CSRNP3Q8WYN3 585 aa33.43■■■□□ 2.94
SCAMP5-213ENST00000567535 CFAP43Q8NDM7 1665 aa33.4■■■□□ 2.94
SCAMP5-213ENST00000567535 SAMD9Q5K651 1589 aa33.38■■■□□ 2.93
SCAMP5-213ENST00000567535 EEA1Q15075 1411 aa33.36■■■□□ 2.93
SCAMP5-213ENST00000567535 MAGI3Q5TCQ9 1506 aa33.35■■■□□ 2.93
SCAMP5-213ENST00000567535 CD109Q6YHK3 1445 aa33.34■■■□□ 2.93
SCAMP5-213ENST00000567535 P3H3Q8IVL6 736 aa33.31■■■□□ 2.92
SCAMP5-213ENST00000567535 FAM9AQ8IZU1 332 aaPredicted RBP33.31■■■□□ 2.92
SCAMP5-213ENST00000567535 KCNH8Q96L42 1107 aa33.3■■■□□ 2.92
SCAMP5-213ENST00000567535 ATP10BO94823 1461 aa33.27■■■□□ 2.92
SCAMP5-213ENST00000567535 ADGRL1O94910 1474 aa33.27■■■□□ 2.92
SCAMP5-213ENST00000567535 RAPGEF6Q8TEU7 1601 aa33.23■■■□□ 2.91
SCAMP5-213ENST00000567535 ARID3CA6NKF2 412 aa33.21■■■□□ 2.91
SCAMP5-213ENST00000567535 ABCA9Q8IUA7 1624 aa33.16■■■□□ 2.9
SCAMP5-213ENST00000567535 KIF21BO75037 1637 aa33.13■■■□□ 2.89
SCAMP5-213ENST00000567535 NUP153P49790 1475 aaKnown RBP33.11■■■□□ 2.89
SCAMP5-213ENST00000567535 FHOD3Q2V2M9 1422 aa33.1■■■□□ 2.89
SCAMP5-213ENST00000567535 ARAP3Q8WWN8 1544 aa33.09■■■□□ 2.89
SCAMP5-213ENST00000567535 RANGAP1P46060 587 aaPredicted RBP33.05■■■□□ 2.88
SCAMP5-213ENST00000567535 EFCAB5A4FU69 1503 aa33.05■■■□□ 2.88
SCAMP5-213ENST00000567535 PHLDB1Q86UU1 1377 aa33■■■□□ 2.87
SCAMP5-213ENST00000567535 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP33■■■□□ 2.87
SCAMP5-213ENST00000567535 HNRNPUL2Q1KMD3 747 aaKnown RBP33■■■□□ 2.87
SCAMP5-213ENST00000567535 NEO1Q92859 1461 aa32.96■■■□□ 2.87
SCAMP5-213ENST00000567535 PLEKHD1A6NEE1 506 aa32.85■■■□□ 2.85
SCAMP5-213ENST00000567535 FRMPD1Q5SYB0 1578 aa32.84■■■□□ 2.85
SCAMP5-213ENST00000567535 HECW2Q9P2P5 1572 aa32.83■■■□□ 2.85
SCAMP5-213ENST00000567535 RAPGEF3O95398 923 aa32.82■■■□□ 2.84
SCAMP5-213ENST00000567535 CHIC1Q5VXU3 224 aa32.81■■■□□ 2.84
SCAMP5-213ENST00000567535 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP32.8■■■□□ 2.84
SCAMP5-213ENST00000567535 CDK13Q14004 1512 aaKnown RBP32.77■■■□□ 2.84
SCAMP5-213ENST00000567535 TTC37Q6PGP7 1564 aa32.77■■■□□ 2.84
SCAMP5-213ENST00000567535 CFAP74Q9C0B2 1584 aa32.77■■■□□ 2.84
SCAMP5-213ENST00000567535 UBTFP17480 764 aaKnown RBP32.76■■■□□ 2.83
SCAMP5-213ENST00000567535 FANCAO15360 1455 aa32.74■■■□□ 2.83
SCAMP5-213ENST00000567535 FMN1Q68DA7 1419 aa32.72■■■□□ 2.83
SCAMP5-213ENST00000567535 EHMT2Q96KQ7 1210 aa32.72■■■□□ 2.83
SCAMP5-213ENST00000567535 ARHGAP35Q9NRY4 1499 aa32.72■■■□□ 2.83
SCAMP5-213ENST00000567535 RICTORQ6R327 1708 aa32.71■■■□□ 2.83
SCAMP5-213ENST00000567535 HECW1Q76N89 1606 aa32.71■■■□□ 2.83
SCAMP5-213ENST00000567535 ADAMTSL3P82987 1691 aa32.71■■■□□ 2.83
SCAMP5-213ENST00000567535 AKNAQ7Z591 1439 aa32.7■■■□□ 2.83
SCAMP5-213ENST00000567535 DENND4BO75064 1496 aaPredicted RBP32.7■■■□□ 2.83
SCAMP5-213ENST00000567535 ARHGEF40Q8TER5 1519 aa32.68■■■□□ 2.82
SCAMP5-213ENST00000567535 BCORL1Q5H9F3 1711 aa32.63■■■□□ 2.81
SCAMP5-213ENST00000567535 ZMYM4Q5VZL5 1548 aa32.61■■■□□ 2.81
SCAMP5-213ENST00000567535 PTPRMP28827 1452 aa32.61■■■□□ 2.81
SCAMP5-213ENST00000567535 PLCH2O75038 1416 aa32.57■■■□□ 2.8
SCAMP5-213ENST00000567535 MADDQ8WXG6 1647 aa32.56■■■□□ 2.8
SCAMP5-213ENST00000567535 ATP1B4Q9UN42 357 aaPredicted RBP32.55■■■□□ 2.8
SCAMP5-213ENST00000567535 ARID4BQ4LE39 1312 aaPredicted RBP32.54■■■□□ 2.8
SCAMP5-213ENST00000567535 MYO5CQ9NQX4 1742 aa32.53■■■□□ 2.8
SCAMP5-213ENST00000567535 ZFYVE16Q7Z3T8 1539 aa32.51■■■□□ 2.8
SCAMP5-213ENST00000567535 CDK11AQ9UQ88 783 aaPredicted RBP32.51■■■□□ 2.79
SCAMP5-213ENST00000567535 MAGI2Q86UL8 1455 aa32.5■■■□□ 2.79
SCAMP5-213ENST00000567535 KIF14Q15058 1648 aa32.5■■■□□ 2.79
SCAMP5-213ENST00000567535 POGZQ7Z3K3 1410 aa32.5■■■□□ 2.79
SCAMP5-213ENST00000567535 LRRIQ1Q96JM4 1722 aa32.49■■■□□ 2.79
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms